Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339490
Identifier: 146339490
GI number: 146339490
Start: 2642894
End: 2644066
Strand: Direct
Name: 146339490
Synonym: BRADO2479
Alternate gene names: NA
Gene position: 2642894-2644066 (Clockwise)
Preceding gene: 146339489
Following gene: 146339496
Centisome position: 35.44
GC content: 66.5
Gene sequence:
>1173_bases ATGATCAATCTCACGCCCGAGACGGTTCTGCCCGATGATGGTGCCAGCGGCACACTGGTCGGCCGAGTCTGGCGGCCCGA TCTGGACGGACCTGCGGTGGTCGCGGTGCGTGACGACGGCGTGTTCGACGTCACCTCGGCCTTCCCGACCGTCACAGCGT TGTGCGAGCACGACGATCCCGCTGCGGCGCTGAACGCGATGAAGGGTGAACGCATCGGCGACCTCGCCGCCATTCTCGCC AACACGCCGCCAGACCGCCGCAATCCCGCCCAGCCATGGCTGCTGGCCCCGGTCGATCTGCAGGTCTTAAAGGCCGCTGG CGTCACCTTTGCGATCTCGATGCTCGAGCGCGTCATCGAGGAGCGCGCGCGCGGCAATCCGGCGTCCGCCGAGGCGATCC GCAAAGAGGTGGTGCGCCTGGTCGGCGACGATTTCTCCAAGCTCAAGCCCGGCTCGGACCAGGCGATGCACTTGAAGCAG GTGCTGATCGAGCAGAACGCCTGGAGCCAGTATCTCGAGGTCGGCATCGGCCCCGACGCCGAGGTCTTCACCAAGGCGCC GACCTTGTCCTCGGTCGGCACCGGCATGGATGCCGGCCTGCATCCGAAATCGACCTGGAACAATCCGGAGCCGGAGGTCG TGCTGGTGGTGTCGAGCCGCGGTACGATCGTCGGCGCGACGCTCGGCAACGACGTCAATCTGCGCGACTTCGAGGGCCGC TCGGCGCTCCTGCTCTCCAAGGCCAAGGACAACAACGCCTCCTGCGCCATCGGCCCCTTGCTCCGCCTGTTCGACAAGAC CTTCACGCTCGACGATGTCCGCAAAATGGACGTGGCGCTCAACGTCGCCGGCAGCGATGGCTTCGTGCTCGACGGGCATT CGTCGATATCAAAGATCAGCCGCGACCCGACCGATCTCGTCGCCCAGACCATCGGCGCCGTGCATCAATATCCCGACGGC TTCGCGTTGTTCCTCGGCACCATGTTCGCCCCCGTCAAGGACCGCGACGCGCCGGGGCAGGGCTTCACCCACAAGCGCGA CGACATCGTCACCATCTCCGCCCCGCAACTCGGCCGCCTCGTCAACCGCATGCGCAACAGCGACGAATGCGAGCCCTGGA CCTTCGGCGTCGGCGCGCTGATGCGGAGCCTGGCGCGGCGCAAGCTGAGTTGA
Upstream 100 bases:
>100_bases GCGGCCTCCCCCCGGAATGACGGAGCGTATGGCTTGGAGTTGGCTCCCGCCGATGCTACCTGTGCTCCCCAGCAACAAGA ACAATGGGGAGCACGCCGCG
Downstream 100 bases:
>100_bases GCCGCGCAGCATCTTCACACACTGCGTCATTCCGGGGCGCGCGACAGCACGAGCCCGGAATCCATACGCCGCAGCGGGCG TGAGGCGGATGGTCTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxy-D-Arabinonate Dehydratase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MINLTPETVLPDDGASGTLVGRVWRPDLDGPAVVAVRDDGVFDVTSAFPTVTALCEHDDPAAALNAMKGERIGDLAAILA NTPPDRRNPAQPWLLAPVDLQVLKAAGVTFAISMLERVIEERARGNPASAEAIRKEVVRLVGDDFSKLKPGSDQAMHLKQ VLIEQNAWSQYLEVGIGPDAEVFTKAPTLSSVGTGMDAGLHPKSTWNNPEPEVVLVVSSRGTIVGATLGNDVNLRDFEGR SALLLSKAKDNNASCAIGPLLRLFDKTFTLDDVRKMDVALNVAGSDGFVLDGHSSISKISRDPTDLVAQTIGAVHQYPDG FALFLGTMFAPVKDRDAPGQGFTHKRDDIVTISAPQLGRLVNRMRNSDECEPWTFGVGALMRSLARRKLS
Sequences:
>Translated_390_residues MINLTPETVLPDDGASGTLVGRVWRPDLDGPAVVAVRDDGVFDVTSAFPTVTALCEHDDPAAALNAMKGERIGDLAAILA NTPPDRRNPAQPWLLAPVDLQVLKAAGVTFAISMLERVIEERARGNPASAEAIRKEVVRLVGDDFSKLKPGSDQAMHLKQ VLIEQNAWSQYLEVGIGPDAEVFTKAPTLSSVGTGMDAGLHPKSTWNNPEPEVVLVVSSRGTIVGATLGNDVNLRDFEGR SALLLSKAKDNNASCAIGPLLRLFDKTFTLDDVRKMDVALNVAGSDGFVLDGHSSISKISRDPTDLVAQTIGAVHQYPDG FALFLGTMFAPVKDRDAPGQGFTHKRDDIVTISAPQLGRLVNRMRNSDECEPWTFGVGALMRSLARRKLS >Mature_390_residues MINLTPETVLPDDGASGTLVGRVWRPDLDGPAVVAVRDDGVFDVTSAFPTVTALCEHDDPAAALNAMKGERIGDLAAILA NTPPDRRNPAQPWLLAPVDLQVLKAAGVTFAISMLERVIEERARGNPASAEAIRKEVVRLVGDDFSKLKPGSDQAMHLKQ VLIEQNAWSQYLEVGIGPDAEVFTKAPTLSSVGTGMDAGLHPKSTWNNPEPEVVLVVSSRGTIVGATLGNDVNLRDFEGR SALLLSKAKDNNASCAIGPLLRLFDKTFTLDDVRKMDVALNVAGSDGFVLDGHSSISKISRDPTDLVAQTIGAVHQYPDG FALFLGTMFAPVKDRDAPGQGFTHKRDDIVTISAPQLGRLVNRMRNSDECEPWTFGVGALMRSLARRKLS
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41851; Mature: 41851
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTPETVLPDDGASGTLVGRVWRPDLDGPAVVAVRDDGVFDVTSAFPTVTALCEHDDP CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCH AAALNAMKGERIGDLAAILANTPPDRRNPAQPWLLAPVDLQVLKAAGVTFAISMLERVIE HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHH ERARGNPASAEAIRKEVVRLVGDDFSKLKPGSDQAMHLKQVLIEQNAWSQYLEVGIGPDA HHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH EVFTKAPTLSSVGTGMDAGLHPKSTWNNPEPEVVLVVSSRGTIVGATLGNDVNLRDFEGR HHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEECCCC SALLLSKAKDNNASCAIGPLLRLFDKTFTLDDVRKMDVALNVAGSDGFVLDGHSSISKIS CEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCEEECCCHHHHHHC RDPTDLVAQTIGAVHQYPDGFALFLGTMFAPVKDRDAPGQGFTHKRDDIVTISAPQLGRL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHH VNRMRNSDECEPWTFGVGALMRSLARRKLS HHHHCCCCCCCCEEECHHHHHHHHHHHCCC >Mature Secondary Structure MINLTPETVLPDDGASGTLVGRVWRPDLDGPAVVAVRDDGVFDVTSAFPTVTALCEHDDP CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCCH AAALNAMKGERIGDLAAILANTPPDRRNPAQPWLLAPVDLQVLKAAGVTFAISMLERVIE HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHHH ERARGNPASAEAIRKEVVRLVGDDFSKLKPGSDQAMHLKQVLIEQNAWSQYLEVGIGPDA HHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH EVFTKAPTLSSVGTGMDAGLHPKSTWNNPEPEVVLVVSSRGTIVGATLGNDVNLRDFEGR HHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEECCCC SALLLSKAKDNNASCAIGPLLRLFDKTFTLDDVRKMDVALNVAGSDGFVLDGHSSISKIS CEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHEEEEEEEECCCCEEECCCHHHHHHC RDPTDLVAQTIGAVHQYPDGFALFLGTMFAPVKDRDAPGQGFTHKRDDIVTISAPQLGRL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHH VNRMRNSDECEPWTFGVGALMRSLARRKLS HHHHCCCCCCCCEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA