Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339465
Identifier: 146339465
GI number: 146339465
Start: 2610767
End: 2611918
Strand: Direct
Name: 146339465
Synonym: BRADO2451
Alternate gene names: NA
Gene position: 2610767-2611918 (Clockwise)
Preceding gene: 146339464
Following gene: 146339466
Centisome position: 35.01
GC content: 65.62
Gene sequence:
>1152_bases ATGGCCGAGGTCAATGATGGTTCGCGGATGATCTTCGATCGCAGCAAGCTGCCCGGGCAGGTGGTCCTCGTTCTCCAGGG CGGCGGCGCGCTGGGATCGTATCAGGCCGGCGTCTATCAGGCGCTGCACGAGGCGGGCCTCGAGCCGGACTGGGTGATCG GAACGTCGATCGGAGCCATCAATGCCGCGCTGATCGCCGGCAGTCCGGGACAGGAGCGGATGGCGCGGCTGCACGAGTTC TGGAAGCGGATGCACCACCGGCCGGGCTGGACGCTGCGCACGGCCTTCCCGGATTTCAACGACCGCCTGTCCTATTGGAC CACCGTGACGCATGGCATTCCCGGCTTCTTCCGTCCCAACGCGCTGGCCCATGCCGGTGACGCCTATCCGCTCGGGGCCG AGCAGGCGGGCTACTACTCGACAGGCCCGCTGCGCGAAACGCTGCAGGAGCTGGTCGACTTCGATCTCCTGAACAAAGCC GGGCTTCGTCTCACGGTGGGCGCCGCGCATGTCCAGAGCAGCCGGATGCATTACTTTGACAGCCGCGACGCCGCGATCGA TATACGTCACATCCTGGCCTCGGGCGCATTGCCGCCGGCCTTTCCCGCGGTGCGCATCGACGGCGAGTTGTATTGGGATG GCGGCATCCTGTCGAACACGCCGACCGAGGTGGTGTTCGACGACAACCCGCGCAAGAACTCTCTGATCTTCGCGGTGCAT TTGTGGAATCCGCACGGCCCGGAGCCCGTGACGATGGCGGAGGTGTTCAACCGTCACAAGGACGTCCAGTATTCGAGCCG GATCGCCAGCCATATCGTCCGCCAGCAGCAGACGCACCGCTTGCGGCACATCATCAACGAGCTGGCTGCGCGGCTGCCGG AGCATCTGCGCAACGATCCGGCCGTTCGCGAGCTTGCCAGCTACGGTTGCCAGACGCGCATGCATGTCGTCCGGCTGTTG GCGCCGCAACTGGAGCGCGAGAGCCATACCAAGGACATCGACTTCAGCGAACGCGGGATCACGATGCGCTGGAGCGCCGG TTATCAGCACACCCGCTCCGCGCTGGAGCAGATGCCGTGGCAGGGCGAGTTCGATCCGCTCTCAGGCGTGGTGCTGCATG AACCGGCGGTGACGGCCGTTGCCGCGGAGTAG
Upstream 100 bases:
>100_bases ATCGCGCGCGGCGGCTGGACCGCGCACTGACGGTGCGGTGTAACAAGAGAACTCGCAACAACGAACAACAACCGAACATG CATCACACAGGAGGGGAGAC
Downstream 100 bases:
>100_bases CGGACGGCGTTCCTCAGCGGATCATTTGTAGTTAAAGGTGCGGTCGGAGGGCATTTCGATACCGCCCGATCCCCTCGCTT TAAGGGATTAGTCGTCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Alpha/Beta Hydrolase; Transmembrane Protein; Serine Protease; Patatin Family Phospholipase; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Dehydrogenase/Reductase; Phospholipase Patatin Family Protein; Phospholipase; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAEVNDGSRMIFDRSKLPGQVVLVLQGGGALGSYQAGVYQALHEAGLEPDWVIGTSIGAINAALIAGSPGQERMARLHEF WKRMHHRPGWTLRTAFPDFNDRLSYWTTVTHGIPGFFRPNALAHAGDAYPLGAEQAGYYSTGPLRETLQELVDFDLLNKA GLRLTVGAAHVQSSRMHYFDSRDAAIDIRHILASGALPPAFPAVRIDGELYWDGGILSNTPTEVVFDDNPRKNSLIFAVH LWNPHGPEPVTMAEVFNRHKDVQYSSRIASHIVRQQQTHRLRHIINELAARLPEHLRNDPAVRELASYGCQTRMHVVRLL APQLERESHTKDIDFSERGITMRWSAGYQHTRSALEQMPWQGEFDPLSGVVLHEPAVTAVAAE
Sequences:
>Translated_383_residues MAEVNDGSRMIFDRSKLPGQVVLVLQGGGALGSYQAGVYQALHEAGLEPDWVIGTSIGAINAALIAGSPGQERMARLHEF WKRMHHRPGWTLRTAFPDFNDRLSYWTTVTHGIPGFFRPNALAHAGDAYPLGAEQAGYYSTGPLRETLQELVDFDLLNKA GLRLTVGAAHVQSSRMHYFDSRDAAIDIRHILASGALPPAFPAVRIDGELYWDGGILSNTPTEVVFDDNPRKNSLIFAVH LWNPHGPEPVTMAEVFNRHKDVQYSSRIASHIVRQQQTHRLRHIINELAARLPEHLRNDPAVRELASYGCQTRMHVVRLL APQLERESHTKDIDFSERGITMRWSAGYQHTRSALEQMPWQGEFDPLSGVVLHEPAVTAVAAE >Mature_382_residues AEVNDGSRMIFDRSKLPGQVVLVLQGGGALGSYQAGVYQALHEAGLEPDWVIGTSIGAINAALIAGSPGQERMARLHEFW KRMHHRPGWTLRTAFPDFNDRLSYWTTVTHGIPGFFRPNALAHAGDAYPLGAEQAGYYSTGPLRETLQELVDFDLLNKAG LRLTVGAAHVQSSRMHYFDSRDAAIDIRHILASGALPPAFPAVRIDGELYWDGGILSNTPTEVVFDDNPRKNSLIFAVHL WNPHGPEPVTMAEVFNRHKDVQYSSRIASHIVRQQQTHRLRHIINELAARLPEHLRNDPAVRELASYGCQTRMHVVRLLA PQLERESHTKDIDFSERGITMRWSAGYQHTRSALEQMPWQGEFDPLSGVVLHEPAVTAVAAE
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42705; Mature: 42574
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVNDGSRMIFDRSKLPGQVVLVLQGGGALGSYQAGVYQALHEAGLEPDWVIGTSIGAI CCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHH NAALIAGSPGQERMARLHEFWKRMHHRPGWTLRTAFPDFNDRLSYWTTVTHGIPGFFRPN EEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC ALAHAGDAYPLGAEQAGYYSTGPLRETLQELVDFDLLNKAGLRLTVGAAHVQSSRMHYFD CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHCCC SRDAAIDIRHILASGALPPAFPAVRIDGELYWDGGILSNTPTEVVFDDNPRKNSLIFAVH CCCCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCEECCCCCEEEECCCCCCCCEEEEEE LWNPHGPEPVTMAEVFNRHKDVQYSSRIASHIVRQQQTHRLRHIINELAARLPEHLRNDP ECCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVRELASYGCQTRMHVVRLLAPQLERESHTKDIDFSERGITMRWSAGYQHTRSALEQMPW HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCC QGEFDPLSGVVLHEPAVTAVAAE CCCCCCCCCEEEECCCCEEEECC >Mature Secondary Structure AEVNDGSRMIFDRSKLPGQVVLVLQGGGALGSYQAGVYQALHEAGLEPDWVIGTSIGAI CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHH NAALIAGSPGQERMARLHEFWKRMHHRPGWTLRTAFPDFNDRLSYWTTVTHGIPGFFRPN EEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC ALAHAGDAYPLGAEQAGYYSTGPLRETLQELVDFDLLNKAGLRLTVGAAHVQSSRMHYFD CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHCCC SRDAAIDIRHILASGALPPAFPAVRIDGELYWDGGILSNTPTEVVFDDNPRKNSLIFAVH CCCCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCEECCCCCEEEECCCCCCCCEEEEEE LWNPHGPEPVTMAEVFNRHKDVQYSSRIASHIVRQQQTHRLRHIINELAARLPEHLRNDP ECCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVRELASYGCQTRMHVVRLLAPQLERESHTKDIDFSERGITMRWSAGYQHTRSALEQMPW HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCC QGEFDPLSGVVLHEPAVTAVAAE CCCCCCCCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA