| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339443
Identifier: 146339443
GI number: 146339443
Start: 2589144
End: 2591345
Strand: Direct
Name: 146339443
Synonym: BRADO2429
Alternate gene names: NA
Gene position: 2589144-2591345 (Clockwise)
Preceding gene: 146339442
Following gene: 146339444
Centisome position: 34.72
GC content: 66.67
Gene sequence:
>2202_bases ATGTCGGCCGAACTCGCAACCACACGGGCATCCATGGCAGGCACTGACGCGCCGGCTGAGCAGCCCTTCTACATTCCCAT GACCGGGCCCGCGGCGCGGCCGCGCCGCTCGCTCAAGCACGACGACACTTTCATCGTGCTCGACGGCCATGGCGATATCG GCGCCTCGGCCGGCGGTCCGGACGGCCTGTTCAATGCCGATACGCGCTATCTGGCGCGGCTCGAACTGACGCTTGCCGAG GTACAGCCGCTGTTGCTCGGATCGAGCCTGCGCGACGACAATTCCGGTCTGACCATCGATCTGACCAATCCGGACATCTA TCATCAGGGCCGGCTCGTGCTGCCGAAGGACATGCTGCACATCGTGCGCACGATCTTTCTGTGGCGGGGCACCTTCTATC AGCGCATTGGGGTCCAGAACCACGGCGATCGCCGCGCAAGCTTCGATCTGAAGCTGACGTTCGACAATGACTTTGCCGAC CTGTTCGAGGTCCGTGGCTCCGTGCGCAAGCGGCGCGGCACCGGCTCGGCTCGCCTGATGGGGCCGTCCGACGTGATGCT CGACTATCGCGGGCTTGACAATGTGACGCGCACGACGGCGCTGCATTTCGACCCGCGGCCGGTGCGGCTGGCGGTCGATG TCGCCAGCTACCACTTCGACCTGGAGCCGCAGCAATCGACATCGCTGTTCATCGCAGTGACCTGCAACGCCGCGGCCGGG CAGCAGCCGGGCCGGTTCTTCCGCAGCCTGCTCGCGCATCGCCGCGAGATGCGCCGCTGCACCCACGGTGCGACCACGAT CGAGACTTCCAACGACATCCTCAACGAGGTGCTGTGCCAGGCGGCCGCCGATCTGAATATCCTGATGACCGACACTCCGG AGGGGCGTTATCCCTATGCGGGCATTCCCTGGTACTCGACGACGTTCGGCCGCGACGGACTGATCACGGCGATGCAGATG CTGTGGGTCGATCCGCGAATCGCGCGCGGCGTATTGCGCAGGCTCGCGCGCCATCAGGCCAGGGAAGCGGATCCGCTCGC GGATGCCGAGCCGGGCAAGATCCTGCACGAGATGCGCGGCGGCGAGATGGCGGCGCTGCGCGAGGTGCCGTTCGCCTGCT ACTATGGGAGCGTCGATTCCACGCCGTTGTTCGTTTTGCTGGCCGGCCTCTATGTCGAGCGCACCGGCGATCTCGACACC TTGAAGGAGCTGTGGCCGGCGATCGAACTGGCGCTGAGCTGGATCGACGGGCCAGGAGACCCCGACCGTGACGGCTTCGT CGAATATCAGCGGGCCTCGGAGCAGGGGCTCGCCAACCAGGGCTGGAAGGATTCCTACGACGCGGTGTTCCATGCCGACG GCCAACTGGCCGAAGGCAATATCGCGCTCGCCGAGGTGCAGGGCTACGTGTTCGCCGGCAAGCAACTCGCCGCGCGCTGT GCGCGACGGCTCGGCAAGGCGGATTTGGCCGATCGCCTGGACGCCGAAGCCGCTGCTCTTGCCAAGCGGTTCGAGGACGC CTTCTGGTGCGAGGAGCTGACCACCTATGCGCTCGCGCTCGACGGCAACAAGCAGCCGTGCCGTGTGCGCACGTCCAATG CGGGCCAGCTGTTGTTCAGCGGCATGGTGCGCGAGGATCGCGCTCGCAAGGTCGCCGCCGACCTGCTGCGGCCGCATTTC TTCTCCGGCTGGGGCATCCGCACCGTGGCGCTCGGTGAGGCGCGCTACAATCCGATGTCCTATCACGACGGATCGATATG GCCGCACGACAACGCGCTGATCACGCTCGGCCTGTCGCGCTACGGCCTGAAACATGCGGTCGAGGAGGTGTTCAAGGGCC TGTTCGAGGCGGCGGCCTACATGGATCTGCGCCGGCTGCCCGAATTGTTCTGCGGCTTCCGACGAGAGAAGCATCGCGGG CCGACGCTCTATCCCGTGGCCTGCGCGCCGCAGGCCTGGGCCAGCGCGACGCCGTTCACGCTGCTCGAAGCGGCGCTCGG GCTGGAGTTCGATGCCGCGCGCGGCGAGATCCGGCTGCGCAATCCGCGGCTGCCGGCGTTCCTCGATTGGGTCGTGCTGC GCGATCTTCGGCTCGGTCATTCGACGATCGATCTGCGGCTGCGCCGCCACGGCGAGGACGTCTCGATGGAGGTGCTGCGG CGGCGCGGCCAGATTCAGGTCTCGCTGGTGCTGGCGCAATGA
Upstream 100 bases:
>100_bases GGAGATGAACCGACTCGCCAAATTCGCGGCGTGAGCCGTATCGAGTGCTGATCGCGCGTCCGCGGCGCCCGGGTCGGCGC CAACTCGCACGAGGTCCATC
Downstream 100 bases:
>100_bases GAAACGCGAATCATCGTCGGCGAGCTCCCGGTAAAGCGTTCGGCTTCGTCGCTCTCTCGCTGATCGCGCTGCAGGTTGCC GGCGCCGATGCGCAGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Amylo-Alpha-1 6-Glucosidase Family Protein
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAE VQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFAD LFEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQM LWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDT LKELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHF FSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRG PTLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR RRGQIQVSLVLAQ
Sequences:
>Translated_733_residues MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAE VQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFAD LFEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQM LWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDT LKELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHF FSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRG PTLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR RRGQIQVSLVLAQ >Mature_732_residues SAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGPDGLFNADTRYLARLELTLAEV QPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLHIVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADL FEVRGSVRKRRGTGSARLMGPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAGQ QPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYAGIPWYSTTFGRDGLITAMQML WVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRGGEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTL KELWPAIELALSWIDGPGDPDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARCA RRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFSGMVREDRARKVAADLLRPHFF SGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSRYGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGP TLYPVACAPQAWASATPFTLLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLRR RGQIQVSLVLAQ
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81628; Mature: 81497
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGP CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCC DGLFNADTRYLARLELTLAEVQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLH CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCEECCHHHHH IVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADLFEVRGSVRKRRGTGSARLM HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE GPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG CCHHHEEEECCCCCCHHEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYA CCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GIPWYSTTFGRDGLITAMQMLWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRG CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTLKELWPAIELALSWIDGPGD CCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEEEECHHHHHHH ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHH GMVREDRARKVAADLLRPHFFSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSR HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHH YGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGPTLYPVACAPQAWASATPFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHH LLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR HHHHHHCCEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH RRGQIQVSLVLAQ CCCCEEEEEEEEC >Mature Secondary Structure SAELATTRASMAGTDAPAEQPFYIPMTGPAARPRRSLKHDDTFIVLDGHGDIGASAGGP CCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCC DGLFNADTRYLARLELTLAEVQPLLLGSSLRDDNSGLTIDLTNPDIYHQGRLVLPKDMLH CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCEECCHHHHH IVRTIFLWRGTFYQRIGVQNHGDRRASFDLKLTFDNDFADLFEVRGSVRKRRGTGSARLM HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE GPSDVMLDYRGLDNVTRTTALHFDPRPVRLAVDVASYHFDLEPQQSTSLFIAVTCNAAAG CCHHHEEEECCCCCCHHEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC QQPGRFFRSLLAHRREMRRCTHGATTIETSNDILNEVLCQAAADLNILMTDTPEGRYPYA CCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GIPWYSTTFGRDGLITAMQMLWVDPRIARGVLRRLARHQAREADPLADAEPGKILHEMRG CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GEMAALREVPFACYYGSVDSTPLFVLLAGLYVERTGDLDTLKELWPAIELALSWIDGPGD CCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PDRDGFVEYQRASEQGLANQGWKDSYDAVFHADGQLAEGNIALAEVQGYVFAGKQLAARC CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCEEEECHHHHHHH ARRLGKADLADRLDAEAAALAKRFEDAFWCEELTTYALALDGNKQPCRVRTSNAGQLLFS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEECCCCHHHHH GMVREDRARKVAADLLRPHFFSGWGIRTVALGEARYNPMSYHDGSIWPHDNALITLGLSR HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHH YGLKHAVEEVFKGLFEAAAYMDLRRLPELFCGFRREKHRGPTLYPVACAPQAWASATPFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHH LLEAALGLEFDAARGEIRLRNPRLPAFLDWVVLRDLRLGHSTIDLRLRRHGEDVSMEVLR HHHHHHCCEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH RRGQIQVSLVLAQ CCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA