| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ybfA [H]
Identifier: 146339382
GI number: 146339382
Start: 2520181
End: 2521056
Strand: Direct
Name: ybfA [H]
Synonym: BRADO2365
Alternate gene names: 146339382
Gene position: 2520181-2521056 (Clockwise)
Preceding gene: 146339381
Following gene: 146339385
Centisome position: 33.8
GC content: 71.0
Gene sequence:
>876_bases ATGCTCGATCCCGTCGCTCGCGTCCGCCGCTTCAACCGCGCCGTCACCTCGGAGGTCGGCGCGCTCGATACGTCGTTCCT CGGCCGAGGCCGGCCGCTCGGCGCGGCGCGCGTGCTCAATGCGATCGGCCATGGCCGCAGCGACGTGGCGGAGTTGCGCG ACTATCTCGCGCTCGATTCCGGACTGATGAGCCGCTTCCTGCGCGGCCTCGAGGACGAGGGGCTGATCACGACGAAGCCG CATCCCGACGATGCGCGCCGCCGCAGCGCGAAGCTCACCGCCGCCGGCCGGCGCGAGTTCGAGGCCTATGAGACGCTCTC CAATGCGCAGGCCTCCGCGATGCTCGCGCGCTCCAGCCAGCGCGAGGCACTGCTCGCGGCGATGGACATGGTCGCTGCCG CGCTCGGTCGCGACCGCATCCGCATCGACGAGGTCGATCCGCGCGGCGATCCCGCGCGCTATTGCCTCGGCGAGTACTAC GCCGAGCTGTCGCGCCGTTTCGCGCGCGGTTTTGACGTCGCGCTGTCGCGCGATCCCGACGCACTGGACATGATGGCGCC GCGCGGCGCCTTCTTCGTCGCGCTGTCCGACGGCCTGCCGCTCGGCTGCGTCGGGCTGAAGGGCTCGGGCGGCGCGGTCG CCGAGATCAAGCGCCTCTGGGTCGCCCCGGCCGCCCGCGGCCTCGGCCTCGGCAGGCGCCTGATGGACGCAGCCGAAACG GCCGCGCGAAGCCTGTCGATCACGACGCTGCGGCTCGACACCAACAGCGCGCTCGGCGAGGCGCAGCAGCTCTATCGCGC CACCGGATGGACCGAGATCGACCGCTTCAACGACGATCCCTATCCGGACCTGTTCTTCGAGAAGCGTCTATCATGA
Upstream 100 bases:
>100_bases GTACTGGATCATCCGCCTGCGCGGATGATGACAGCGTTGGTGAAGGCGCGCCGCATGCCTCAAGTTGACAAGGAATGATG TCTGACCTAAGTCAGATATC
Downstream 100 bases:
>100_bases CAGCATCGATTGTCATGCTGTCGTCAGCGCCACCTTCATGTCCCGCGCTTCATAGACGCAGCGGTCGTCCGCGAGCACGC GTCCATCAGCGAGGCCGAGC
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MLDPVARVRRFNRAVTSEVGALDTSFLGRGRPLGAARVLNAIGHGRSDVAELRDYLALDSGLMSRFLRGLEDEGLITTKP HPDDARRRSAKLTAAGRREFEAYETLSNAQASAMLARSSQREALLAAMDMVAAALGRDRIRIDEVDPRGDPARYCLGEYY AELSRRFARGFDVALSRDPDALDMMAPRGAFFVALSDGLPLGCVGLKGSGGAVAEIKRLWVAPAARGLGLGRRLMDAAET AARSLSITTLRLDTNSALGEAQQLYRATGWTEIDRFNDDPYPDLFFEKRLS
Sequences:
>Translated_291_residues MLDPVARVRRFNRAVTSEVGALDTSFLGRGRPLGAARVLNAIGHGRSDVAELRDYLALDSGLMSRFLRGLEDEGLITTKP HPDDARRRSAKLTAAGRREFEAYETLSNAQASAMLARSSQREALLAAMDMVAAALGRDRIRIDEVDPRGDPARYCLGEYY AELSRRFARGFDVALSRDPDALDMMAPRGAFFVALSDGLPLGCVGLKGSGGAVAEIKRLWVAPAARGLGLGRRLMDAAET AARSLSITTLRLDTNSALGEAQQLYRATGWTEIDRFNDDPYPDLFFEKRLS >Mature_291_residues MLDPVARVRRFNRAVTSEVGALDTSFLGRGRPLGAARVLNAIGHGRSDVAELRDYLALDSGLMSRFLRGLEDEGLITTKP HPDDARRRSAKLTAAGRREFEAYETLSNAQASAMLARSSQREALLAAMDMVAAALGRDRIRIDEVDPRGDPARYCLGEYY AELSRRFARGFDVALSRDPDALDMMAPRGAFFVALSDGLPLGCVGLKGSGGAVAEIKRLWVAPAARGLGLGRRLMDAAET AARSLSITTLRLDTNSALGEAQQLYRATGWTEIDRFNDDPYPDLFFEKRLS
Specific function: Putative DNA-binding acetyltransferase (Potential) [H]
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR000835 - InterPro: IPR011991 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF01047 MarR [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 31766; Mature: 31766
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPVARVRRFNRAVTSEVGALDTSFLGRGRPLGAARVLNAIGHGRSDVAELRDYLALDS CCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GLMSRFLRGLEDEGLITTKPHPDDARRRSAKLTAAGRREFEAYETLSNAQASAMLARSSQ HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REALLAAMDMVAAALGRDRIRIDEVDPRGDPARYCLGEYYAELSRRFARGFDVALSRDPD HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC ALDMMAPRGAFFVALSDGLPLGCVGLKGSGGAVAEIKRLWVAPAARGLGLGRRLMDAAET HHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARSLSITTLRLDTNSALGEAQQLYRATGWTEIDRFNDDPYPDLFFEKRLS HHHHEEEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCC >Mature Secondary Structure MLDPVARVRRFNRAVTSEVGALDTSFLGRGRPLGAARVLNAIGHGRSDVAELRDYLALDS CCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GLMSRFLRGLEDEGLITTKPHPDDARRRSAKLTAAGRREFEAYETLSNAQASAMLARSSQ HHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REALLAAMDMVAAALGRDRIRIDEVDPRGDPARYCLGEYYAELSRRFARGFDVALSRDPD HHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC ALDMMAPRGAFFVALSDGLPLGCVGLKGSGGAVAEIKRLWVAPAARGLGLGRRLMDAAET HHHHCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARSLSITTLRLDTNSALGEAQQLYRATGWTEIDRFNDDPYPDLFFEKRLS HHHHEEEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]