Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146339290
Identifier: 146339290
GI number: 146339290
Start: 2414736
End: 2416016
Strand: Direct
Name: 146339290
Synonym: BRADO2266
Alternate gene names: NA
Gene position: 2414736-2416016 (Clockwise)
Preceding gene: 146339289
Following gene: 146339291
Centisome position: 32.38
GC content: 64.56
Gene sequence:
>1281_bases ATGATTACGCGACGAAGGCTTCTCGAAACGGCCGCCGCGGGCGGCCTGCTGACGGCGACTGATACGATCTTCAAGCCCGC GCTCGCGGCCGGGAAGGCGGCCAAGATCGGCTATGTCAGCCCGCAGAGCGGCCCGCTCGCGGCCTTCGCCGAGGCCGACA AGTTCATCATCGACGGCTTCAACGCCGCTGCGAAGGCGGCCGGCCTCCAGGTTCAGGTCGTCGTCAAGGACAGCCAGTCG AATCCGAACCGCGCGGCCGAGGTCGCCAAGGAGCTGATCGTCAGCGACAAGGTCAATCTGATGCTCGTCGCCTCGACGCC GGAGACGACCAATCCGGTGTCGACGACCTGCGAGTCCGAAGGTCTGCCGTGCATCTCGACCGTCGCGCCGTGGCAGCCCT GGTTCATCGGCCAGCAGGGCAACCCAGGCGATCCCGCCTCTTGGAAGCCGTTCAGCTCCAGCTATCACTTCTTCTGGGGC CTGGAGGACGTCATCGCCGTCTTCACCAACATGTGGGCGCAGCTGTCGACCAACAAACAAGTGGGCGGTCTCTTCCCGAA TGACGGCGACGGCAACGCCTGGGGAGATCCGAAGGTCGGCTTCCCGCCGGTGCTGACCGAGAAGGGCTACAGACTGATCG ATCCCGGCCGCTACCAGAACCTGTCGGATGATTTCTCCGCGCAGATCAACGCATTTAAGACCGGCAATATTGAGATCGTC ACGGGCGTGATGATCCCGCCGGATTTCACCACCTTCTGGAACCAGGCCAAGCAGAAGGGCTTTGCGCCGAAGATCGCCTC GATCGGCAAGGCGCTGCTGTTCCCGCAAGCCGTGGAGGCGCTCGGCAAGCAGGGGCACAATCTGTCTTCCGAAGTGTGGT GGACGCCGAGCCATCCGTTCAAATCGTCGCTGACAGGCGCCTCGGCGAAGGAGCTTGCCGACGGCTTCACCGCCGCGACG AAGCGGCCGTGGACGCAGCCGATCGGCTTCGTGCACGCCCTGTTCGAGATTGCAGCCGATGTGCTGAAGCGCGTCGACGA TCCGAGCAATGCCGACAAGGTGACGGCCGCGGTCGCGGCGACCAAGCTCGACACTATTGTGGGTCCGATCGCGTGGAACG GCGCCAAGCTGCCGCCGTTCGCCGCGAAGAACGTCTGCAAGACGCCGCTGGTTGGCGGCCAGTGGCGGCTCAAGGAGGGC GGCGGCTACGACCTCGTCATCACCGACAACAAGACGGCGCCCAACATTCCCGCTGGCGGGAAGATCGAGCCGATCGCCTG A
Upstream 100 bases:
>100_bases AGGCTGACATCCGCGCGCTGCTGCGGGACGCCTGGGCCGGCACAGAACCACCGCTCTAGAACGATCGTTGACTTAAAAAA TATCAGGGAGAGAACGAGAC
Downstream 100 bases:
>100_bases CGCGTGATGAGCGGAGCAGCCGGCGTGCCCATCCTCGAACTCGATCATGTCGCCAAGCGCTTCGGCGCGTTGAAGGTCAC GGATGACGTGACCTTCGACG
Product: putative ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MITRRRLLETAAAGGLLTATDTIFKPALAAGKAAKIGYVSPQSGPLAAFAEADKFIIDGFNAAAKAAGLQVQVVVKDSQS NPNRAAEVAKELIVSDKVNLMLVASTPETTNPVSTTCESEGLPCISTVAPWQPWFIGQQGNPGDPASWKPFSSSYHFFWG LEDVIAVFTNMWAQLSTNKQVGGLFPNDGDGNAWGDPKVGFPPVLTEKGYRLIDPGRYQNLSDDFSAQINAFKTGNIEIV TGVMIPPDFTTFWNQAKQKGFAPKIASIGKALLFPQAVEALGKQGHNLSSEVWWTPSHPFKSSLTGASAKELADGFTAAT KRPWTQPIGFVHALFEIAADVLKRVDDPSNADKVTAAVAATKLDTIVGPIAWNGAKLPPFAAKNVCKTPLVGGQWRLKEG GGYDLVITDNKTAPNIPAGGKIEPIA
Sequences:
>Translated_426_residues MITRRRLLETAAAGGLLTATDTIFKPALAAGKAAKIGYVSPQSGPLAAFAEADKFIIDGFNAAAKAAGLQVQVVVKDSQS NPNRAAEVAKELIVSDKVNLMLVASTPETTNPVSTTCESEGLPCISTVAPWQPWFIGQQGNPGDPASWKPFSSSYHFFWG LEDVIAVFTNMWAQLSTNKQVGGLFPNDGDGNAWGDPKVGFPPVLTEKGYRLIDPGRYQNLSDDFSAQINAFKTGNIEIV TGVMIPPDFTTFWNQAKQKGFAPKIASIGKALLFPQAVEALGKQGHNLSSEVWWTPSHPFKSSLTGASAKELADGFTAAT KRPWTQPIGFVHALFEIAADVLKRVDDPSNADKVTAAVAATKLDTIVGPIAWNGAKLPPFAAKNVCKTPLVGGQWRLKEG GGYDLVITDNKTAPNIPAGGKIEPIA >Mature_426_residues MITRRRLLETAAAGGLLTATDTIFKPALAAGKAAKIGYVSPQSGPLAAFAEADKFIIDGFNAAAKAAGLQVQVVVKDSQS NPNRAAEVAKELIVSDKVNLMLVASTPETTNPVSTTCESEGLPCISTVAPWQPWFIGQQGNPGDPASWKPFSSSYHFFWG LEDVIAVFTNMWAQLSTNKQVGGLFPNDGDGNAWGDPKVGFPPVLTEKGYRLIDPGRYQNLSDDFSAQINAFKTGNIEIV TGVMIPPDFTTFWNQAKQKGFAPKIASIGKALLFPQAVEALGKQGHNLSSEVWWTPSHPFKSSLTGASAKELADGFTAAT KRPWTQPIGFVHALFEIAADVLKRVDDPSNADKVTAAVAATKLDTIVGPIAWNGAKLPPFAAKNVCKTPLVGGQWRLKEG GGYDLVITDNKTAPNIPAGGKIEPIA
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45288; Mature: 45288
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRRRLLETAAAGGLLTATDTIFKPALAAGKAAKIGYVSPQSGPLAAFAEADKFIIDGF CCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHCCCEEEEECC NAAAKAAGLQVQVVVKDSQSNPNRAAEVAKELIVSDKVNLMLVASTPETTNPVSTTCESE CHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GLPCISTVAPWQPWFIGQQGNPGDPASWKPFSSSYHFFWGLEDVIAVFTNMWAQLSTNKQ CCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCC VGGLFPNDGDGNAWGDPKVGFPPVLTEKGYRLIDPGRYQNLSDDFSAQINAFKTGNIEIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEEEECCCEEEE TGVMIPPDFTTFWNQAKQKGFAPKIASIGKALLFPQAVEALGKQGHNLSSEVWWTPSHPF EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC KSSLTGASAKELADGFTAATKRPWTQPIGFVHALFEIAADVLKRVDDPSNADKVTAAVAA HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TKLDTIVGPIAWNGAKLPPFAAKNVCKTPLVGGQWRLKEGGGYDLVITDNKTAPNIPAGG HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC KIEPIA CCCCCC >Mature Secondary Structure MITRRRLLETAAAGGLLTATDTIFKPALAAGKAAKIGYVSPQSGPLAAFAEADKFIIDGF CCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHCCCEEEEECC NAAAKAAGLQVQVVVKDSQSNPNRAAEVAKELIVSDKVNLMLVASTPETTNPVSTTCESE CHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC GLPCISTVAPWQPWFIGQQGNPGDPASWKPFSSSYHFFWGLEDVIAVFTNMWAQLSTNKQ CCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCC VGGLFPNDGDGNAWGDPKVGFPPVLTEKGYRLIDPGRYQNLSDDFSAQINAFKTGNIEIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHEEEEEECCCEEEE TGVMIPPDFTTFWNQAKQKGFAPKIASIGKALLFPQAVEALGKQGHNLSSEVWWTPSHPF EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC KSSLTGASAKELADGFTAATKRPWTQPIGFVHALFEIAADVLKRVDDPSNADKVTAAVAA HHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TKLDTIVGPIAWNGAKLPPFAAKNVCKTPLVGGQWRLKEGGGYDLVITDNKTAPNIPAGG HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC KIEPIA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA