| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is opgH [H]
Identifier: 146338997
GI number: 146338997
Start: 2066883
End: 2068982
Strand: Reverse
Name: opgH [H]
Synonym: BRADO1946
Alternate gene names: 146338997
Gene position: 2068982-2066883 (Counterclockwise)
Preceding gene: 146338998
Following gene: 146338995
Centisome position: 27.75
GC content: 68.29
Gene sequence:
>2100_bases TTGCGGATTGACGATGCGGGCGTGGATTTTCTTCCCGCCGAGGCGCCGCGCGACATGGTGCCGTCACCGCTGTCGCGCGC CGCAGCTGAGCGGACACCGATGCGCGATGGAGCGGGGATCGCGCTTCGCCGCGGCCTCGTGCTCGCCGGCACCGCGGCGC TGACGCTGGCCGGCTGCATCAAGATGTACGAGGTCGTCGAGGTCGGCGGCGTGACCGTGCTGGAAGGCATGGTGCTCGTG CTGTTCGGCATCCTCGTTGCATGGATCTCGTTCGCCTTCGTCACCGCGCTGGCCGGCTTCGTCGTGATGCTGCTGCGGCC GCGCGAGACGATCGCGATCCCCACGGACGGTCCGCTGCCCGCGCTTTCGACCCGTACCGCGATGCTGCTGCCGACCTACA ATGAGGACCCGGATGCCGTGATGGTCCGGCTGCGCGCCATGATTGACTCGATCGCCGCGACCGGTGAGGCCGCGCATTTC GACTGGTTCCTGCTCAGCGACACCACCGATCCCGACATCTGGATCGGCGAGGAGGCCGCGTATCTGGCGTTGCGCCAGGC CTGCGGCACGGCGCGCATCTACTACCGTCATCGCGCCGACAACGTCGCGCGCAAGTCCGGCAATATCGCCGAATGGGTAC GGCGCTTTGGCGCGGCCTACGACCAGATGATCATCCTCGATGCCGACAGCCTGATGAGCGGCGAGACCATCGTGCGGCTG GCCCATGCAATGGAGGAGACACCGCAGGCCGCGTTGATCCAGACTCTGCCCGTGATCGTCAACGGCAGCAGCCTGTTCGC GCGGCTGCAGCAGTTCGCCGGCCGTCTCTACGGTCCCGTCATCGCCTCGGGCAACGCCTGGTGGTACGGCGCCGAAAGCA ATTACTGGGGCCACAACGCGATCATCCGCGTCGAAGCCTTCGCACGCGATGCCGCGTTGCCGGAACTGCGCGGGCGAAAA CCGTTCGGCGGGCATATCCTCAGCCATGACTTCATCGAGGCCGCTTTGATGCGCCGCGCCGGCTGGGGGATCTACATGAC AGTCGATCTCGGCGGCAGCTATGAGGAGGTGCCGCCCTCGCTGATCGACTACGCCGCGCGCGACCGGCGCTGGTGCCAGG GCAATCTGCAGCATCTGGCGGTGCTGCCGGCGCGCGGGCTGCACTGGGTGTCGCGGCTGCATCTGTTGATCGGCATCGGC GCCTATGTCACCGCGCCGTTATGGCTCGCCTTCCTCGTGCTCGGCATCCTGATCTCGCTGCAGGCCAATTTCGTCCGGCC GGAATACTTTCCCAAGGGCTTCGCCCTGTTTCCATCCTGGCCGGCGCAGGATCCAATTCTCGCCGCGCAGGTGTTTGCCG CGACGCTCGGCCTGTTGTTCGTGCCGAAGCTGCTGGCCTGCCTCGCCACGCTGCTGACGGCGCAAAGGCGCCGCGGCTTC GGCGGCGGGCTGCGTCTCTGTGTCGCGGTTCTCGCGGAAACGGTGCTGGCGGCGCTGATCGCGCCGTCGATGATGATCTT CCAGTCGGTCGCCGTGATCGAGATCCTGCTGGGGCGCGACGCCGGCTGGCAGGTGCAGCGGCGCAGCGATGGCGGCGTGA GCCGGCAGGAGATTGTCCGCAAATTCGCGCTGCCGACCGTGTGCGGCCTCGCCATGGCCGCGAGCGCCACGGCGGTGTCG CTGCCGCTGCTGGCGTGGATGTCGCCGGTCATCGCCGGCCTGGTGCTTGCAATTCCGATCGGCCTGCTGACGGCCCGTCG CGGTCTCGGCAGGCGCCTGTTCACGACGCCGGAGGAGATCGCCCCACCGCCGGTACTCGTCCGGGCGCGTGCGCTTGCGG ACCTGCCACAACCCGTCCACACATCCGCGCTGGCCGAACTGCGGCAGGACCACGAGCTTCGCCGGCGGCACATCGCCACG CTGTCGGCGCGCCGGCCGCGCGCGCCGGGAGACATCGACGTCGACCTTGCCACAGCGAGAGCGCGGATCGCCGATGCTGA CACGTTCACGCAAGCGCTCGGCTTCCTGTCGCGCCGCGAGACGCTCGCCGTGCTGAATGACAGCACGACGCTGCAGGAGC TGGTCGCGCTGCCAGACTAG
Upstream 100 bases:
>100_bases CGCCCGTCGAGCTGCGCGTGGAGCTGTATGCGAGCGACAAGCTCGCCTCAGAGACATGGATCTATCGATGGACGCCGTGA GCGCACGCACGCCGCGCCCG
Downstream 100 bases:
>100_bases AGCGGCGTGCTACTTCGTCAGATGCGCCGAGGCGATCGCCTGCTGGAACAGCGCGGTCAGCGCCGAGCCGATGCTGCCGC TGGAATCGACCTCGTAGTAG
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MRIDDAGVDFLPAEAPRDMVPSPLSRAAAERTPMRDGAGIALRRGLVLAGTAALTLAGCIKMYEVVEVGGVTVLEGMVLV LFGILVAWISFAFVTALAGFVVMLLRPRETIAIPTDGPLPALSTRTAMLLPTYNEDPDAVMVRLRAMIDSIAATGEAAHF DWFLLSDTTDPDIWIGEEAAYLALRQACGTARIYYRHRADNVARKSGNIAEWVRRFGAAYDQMIILDADSLMSGETIVRL AHAMEETPQAALIQTLPVIVNGSSLFARLQQFAGRLYGPVIASGNAWWYGAESNYWGHNAIIRVEAFARDAALPELRGRK PFGGHILSHDFIEAALMRRAGWGIYMTVDLGGSYEEVPPSLIDYAARDRRWCQGNLQHLAVLPARGLHWVSRLHLLIGIG AYVTAPLWLAFLVLGILISLQANFVRPEYFPKGFALFPSWPAQDPILAAQVFAATLGLLFVPKLLACLATLLTAQRRRGF GGGLRLCVAVLAETVLAALIAPSMMIFQSVAVIEILLGRDAGWQVQRRSDGGVSRQEIVRKFALPTVCGLAMAASATAVS LPLLAWMSPVIAGLVLAIPIGLLTARRGLGRRLFTTPEEIAPPPVLVRARALADLPQPVHTSALAELRQDHELRRRHIAT LSARRPRAPGDIDVDLATARARIADADTFTQALGFLSRRETLAVLNDSTTLQELVALPD
Sequences:
>Translated_699_residues MRIDDAGVDFLPAEAPRDMVPSPLSRAAAERTPMRDGAGIALRRGLVLAGTAALTLAGCIKMYEVVEVGGVTVLEGMVLV LFGILVAWISFAFVTALAGFVVMLLRPRETIAIPTDGPLPALSTRTAMLLPTYNEDPDAVMVRLRAMIDSIAATGEAAHF DWFLLSDTTDPDIWIGEEAAYLALRQACGTARIYYRHRADNVARKSGNIAEWVRRFGAAYDQMIILDADSLMSGETIVRL AHAMEETPQAALIQTLPVIVNGSSLFARLQQFAGRLYGPVIASGNAWWYGAESNYWGHNAIIRVEAFARDAALPELRGRK PFGGHILSHDFIEAALMRRAGWGIYMTVDLGGSYEEVPPSLIDYAARDRRWCQGNLQHLAVLPARGLHWVSRLHLLIGIG AYVTAPLWLAFLVLGILISLQANFVRPEYFPKGFALFPSWPAQDPILAAQVFAATLGLLFVPKLLACLATLLTAQRRRGF GGGLRLCVAVLAETVLAALIAPSMMIFQSVAVIEILLGRDAGWQVQRRSDGGVSRQEIVRKFALPTVCGLAMAASATAVS LPLLAWMSPVIAGLVLAIPIGLLTARRGLGRRLFTTPEEIAPPPVLVRARALADLPQPVHTSALAELRQDHELRRRHIAT LSARRPRAPGDIDVDLATARARIADADTFTQALGFLSRRETLAVLNDSTTLQELVALPD >Mature_699_residues MRIDDAGVDFLPAEAPRDMVPSPLSRAAAERTPMRDGAGIALRRGLVLAGTAALTLAGCIKMYEVVEVGGVTVLEGMVLV LFGILVAWISFAFVTALAGFVVMLLRPRETIAIPTDGPLPALSTRTAMLLPTYNEDPDAVMVRLRAMIDSIAATGEAAHF DWFLLSDTTDPDIWIGEEAAYLALRQACGTARIYYRHRADNVARKSGNIAEWVRRFGAAYDQMIILDADSLMSGETIVRL AHAMEETPQAALIQTLPVIVNGSSLFARLQQFAGRLYGPVIASGNAWWYGAESNYWGHNAIIRVEAFARDAALPELRGRK PFGGHILSHDFIEAALMRRAGWGIYMTVDLGGSYEEVPPSLIDYAARDRRWCQGNLQHLAVLPARGLHWVSRLHLLIGIG AYVTAPLWLAFLVLGILISLQANFVRPEYFPKGFALFPSWPAQDPILAAQVFAATLGLLFVPKLLACLATLLTAQRRRGF GGGLRLCVAVLAETVLAALIAPSMMIFQSVAVIEILLGRDAGWQVQRRSDGGVSRQEIVRKFALPTVCGLAMAASATAVS LPLLAWMSPVIAGLVLAIPIGLLTARRGLGRRLFTTPEEIAPPPVLVRARALADLPQPVHTSALAELRQDHELRRRHIAT LSARRPRAPGDIDVDLATARARIADADTFTQALGFLSRRETLAVLNDSTTLQELVALPD
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=639, Percent_Identity=38.1846635367762, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 75876; Mature: 75876
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDDAGVDFLPAEAPRDMVPSPLSRAAAERTPMRDGAGIALRRGLVLAGTAALTLAGCI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCEEHHHHHHHHHHH KMYEVVEVGGVTVLEGMVLVLFGILVAWISFAFVTALAGFVVMLLRPRETIAIPTDGPLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC ALSTRTAMLLPTYNEDPDAVMVRLRAMIDSIAATGEAAHFDWFLLSDTTDPDIWIGEEAA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCHHH YLALRQACGTARIYYRHRADNVARKSGNIAEWVRRFGAAYDQMIILDADSLMSGETIVRL HHHHHHHCCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCHHCCEEEEECHHHCCCHHHHHH AHAMEETPQAALIQTLPVIVNGSSLFARLQQFAGRLYGPVIASGNAWWYGAESNYWGHNA HHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCE IIRVEAFARDAALPELRGRKPFGGHILSHDFIEAALMRRAGWGIYMTVDLGGSYEEVPPS EEEEEEHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHH LIDYAARDRRWCQGNLQHLAVLPARGLHWVSRLHLLIGIGAYVTAPLWLAFLVLGILISL HHHHHHHCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QANFVRPEYFPKGFALFPSWPAQDPILAAQVFAATLGLLFVPKLLACLATLLTAQRRRGF HHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGLRLCVAVLAETVLAALIAPSMMIFQSVAVIEILLGRDAGWQVQRRSDGGVSRQEIVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHH KFALPTVCGLAMAASATAVSLPLLAWMSPVIAGLVLAIPIGLLTARRGLGRRLFTTPEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH APPPVLVRARALADLPQPVHTSALAELRQDHELRRRHIATLSARRPRAPGDIDVDLATAR CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHH ARIADADTFTQALGFLSRRETLAVLNDSTTLQELVALPD HHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCC >Mature Secondary Structure MRIDDAGVDFLPAEAPRDMVPSPLSRAAAERTPMRDGAGIALRRGLVLAGTAALTLAGCI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCEEHHHHHHHHHHH KMYEVVEVGGVTVLEGMVLVLFGILVAWISFAFVTALAGFVVMLLRPRETIAIPTDGPLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC ALSTRTAMLLPTYNEDPDAVMVRLRAMIDSIAATGEAAHFDWFLLSDTTDPDIWIGEEAA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCHHH YLALRQACGTARIYYRHRADNVARKSGNIAEWVRRFGAAYDQMIILDADSLMSGETIVRL HHHHHHHCCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCHHCCEEEEECHHHCCCHHHHHH AHAMEETPQAALIQTLPVIVNGSSLFARLQQFAGRLYGPVIASGNAWWYGAESNYWGHNA HHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCE IIRVEAFARDAALPELRGRKPFGGHILSHDFIEAALMRRAGWGIYMTVDLGGSYEEVPPS EEEEEEHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHH LIDYAARDRRWCQGNLQHLAVLPARGLHWVSRLHLLIGIGAYVTAPLWLAFLVLGILISL HHHHHHHCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QANFVRPEYFPKGFALFPSWPAQDPILAAQVFAATLGLLFVPKLLACLATLLTAQRRRGF HHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGGLRLCVAVLAETVLAALIAPSMMIFQSVAVIEILLGRDAGWQVQRRSDGGVSRQEIVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHH KFALPTVCGLAMAASATAVSLPLLAWMSPVIAGLVLAIPIGLLTARRGLGRRLFTTPEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH APPPVLVRARALADLPQPVHTSALAELRQDHELRRRHIATLSARRPRAPGDIDVDLATAR CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHH ARIADADTFTQALGFLSRRETLAVLNDSTTLQELVALPD HHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]