| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338996
Identifier: 146338996
GI number: 146338996
Start: 2065575
End: 2066873
Strand: Direct
Name: 146338996
Synonym: BRADO1945
Alternate gene names: NA
Gene position: 2065575-2066873 (Clockwise)
Preceding gene: 146338991
Following gene: 146338999
Centisome position: 27.7
GC content: 62.66
Gene sequence:
>1299_bases GTGCCGCCCGCATGTGAGTACCTCAGCCTGTTGTCGCGGTTCCGCCGCAACGACAGCGGTAATATCGCCGTCATCTTCGC GATCGCGCTGCTGCCGATCCTGGCCTTCATCGGCTCGGCGATCGACTATTCGATGGCGGTGCGGGCCAAGGCCAAGCTGT CGGCCTCGATCGACGCCGCGCTGCTGGCGGCGACCGGCTATACCGCCATGCGCGGGAGTTCATCGGACGCCAAGACGGCC GCGACCAACATGTTCAACGGCCAGATGTCGGCGCACAAGCTGACGTCGAACTCGCTCAGCATCGACATCACCGACAGCGT CAGTGCACGGACCGTGACGGGTAGCGCGACGGTGGTGGTGAAGACCTCCTTCATGTACATGTTCGGCTATCCGACCATGA CGGTCTCGGCGTCCTCGTCGGCGTCTGCCTCGTTCCCGACCTACATGGACTTCTACGTCCTGGTCGACAACTCGCCGTCG CAGGGACTCGGCGCCACCACGGCCGACATGACGACGCTGCAGAACGCGACGACCGACACGTGCGCCTTCGCCTGCCACGA CACCTATACGTCGAGCTCGAAGAAGACGCTGCAGACCAACAGCTACTATGACAAGGCGAAGAAGCTCGGCGTGACGATGC GGATCGACGTCGTCCGGTCGGCAACCCAGTCGCTCACGGACACGGCGACCTCCAGCCAGATCGTCAGCAACCAGTATCGG ATGGCGGTCTACAGCATGGGGGCCGATTGCGGCTCGCTCGGGCTGACTACGGTCGCCAGCCTCTCGTCGAGCATGTCCTC GGTGAAATCGTCGGTCGGTGCGCTGGACCTGATGACCATTCCCTACAGCGGCTACAACAACGACATGTGCACCGATTTCG ACGGCACCATGTCGGCCATGAGCGGCGTCATCCCCACGCAGGGCGACGGTTCGTCGACGAATCCGCAGAAATGGCTGTTC TTCGTGTCCGACGGTGTTGCCGACTATGCCTACCCGACGACATGCAGCAAGACCACCCAGTCTGGGGGACGTTGCGTGGA GCCGCTCACGACGACCACCTGCACTGCGTTGAAGGCTCGCGGTATCAAGATCGCCGTGCTGTACACAACCTATCTCGCCA TCACCAGCAACGGCTATTACAACACCTGGGTCAAGCCCTGGCGCGATTCGATCGGCACCATAATGAAATCCTGCGCCAGC CCCGGCTACTACTACGAGGTCGATTCCAGCGGCAGCATCGGCTCGGCGCTGACCGCGCTGTTCCAGCAGGCGATCGCCTC GGCGCATCTGACGAAGTAG
Upstream 100 bases:
>100_bases AAACGCGATGTAACCGTTTCTCTGCAATTCCATCAATTCCAATGCAACTGTTGCTCAGCAACATGACCTGCGAACGCATC TTGTTTGTTGGAGTCAGGCT
Downstream 100 bases:
>100_bases CACGCCGCTCTAGTCTGGCAGCGCGACCAGCTCCTGCAGCGTCGTGCTGTCATTCAGCACGGCGAGCGTCTCGCGGCGCG ACAGGAAGCCGAGCGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MPPACEYLSLLSRFRRNDSGNIAVIFAIALLPILAFIGSAIDYSMAVRAKAKLSASIDAALLAATGYTAMRGSSSDAKTA ATNMFNGQMSAHKLTSNSLSIDITDSVSARTVTGSATVVVKTSFMYMFGYPTMTVSASSSASASFPTYMDFYVLVDNSPS QGLGATTADMTTLQNATTDTCAFACHDTYTSSSKKTLQTNSYYDKAKKLGVTMRIDVVRSATQSLTDTATSSQIVSNQYR MAVYSMGADCGSLGLTTVASLSSSMSSVKSSVGALDLMTIPYSGYNNDMCTDFDGTMSAMSGVIPTQGDGSSTNPQKWLF FVSDGVADYAYPTTCSKTTQSGGRCVEPLTTTTCTALKARGIKIAVLYTTYLAITSNGYYNTWVKPWRDSIGTIMKSCAS PGYYYEVDSSGSIGSALTALFQQAIASAHLTK
Sequences:
>Translated_432_residues MPPACEYLSLLSRFRRNDSGNIAVIFAIALLPILAFIGSAIDYSMAVRAKAKLSASIDAALLAATGYTAMRGSSSDAKTA ATNMFNGQMSAHKLTSNSLSIDITDSVSARTVTGSATVVVKTSFMYMFGYPTMTVSASSSASASFPTYMDFYVLVDNSPS QGLGATTADMTTLQNATTDTCAFACHDTYTSSSKKTLQTNSYYDKAKKLGVTMRIDVVRSATQSLTDTATSSQIVSNQYR MAVYSMGADCGSLGLTTVASLSSSMSSVKSSVGALDLMTIPYSGYNNDMCTDFDGTMSAMSGVIPTQGDGSSTNPQKWLF FVSDGVADYAYPTTCSKTTQSGGRCVEPLTTTTCTALKARGIKIAVLYTTYLAITSNGYYNTWVKPWRDSIGTIMKSCAS PGYYYEVDSSGSIGSALTALFQQAIASAHLTK >Mature_431_residues PPACEYLSLLSRFRRNDSGNIAVIFAIALLPILAFIGSAIDYSMAVRAKAKLSASIDAALLAATGYTAMRGSSSDAKTAA TNMFNGQMSAHKLTSNSLSIDITDSVSARTVTGSATVVVKTSFMYMFGYPTMTVSASSSASASFPTYMDFYVLVDNSPSQ GLGATTADMTTLQNATTDTCAFACHDTYTSSSKKTLQTNSYYDKAKKLGVTMRIDVVRSATQSLTDTATSSQIVSNQYRM AVYSMGADCGSLGLTTVASLSSSMSSVKSSVGALDLMTIPYSGYNNDMCTDFDGTMSAMSGVIPTQGDGSSTNPQKWLFF VSDGVADYAYPTTCSKTTQSGGRCVEPLTTTTCTALKARGIKIAVLYTTYLAITSNGYYNTWVKPWRDSIGTIMKSCASP GYYYEVDSSGSIGSALTALFQQAIASAHLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45677; Mature: 45546
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPACEYLSLLSRFRRNDSGNIAVIFAIALLPILAFIGSAIDYSMAVRAKAKLSASIDAA CCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCHHHH LLAATGYTAMRGSSSDAKTAATNMFNGQMSAHKLTSNSLSIDITDSVSARTVTGSATVVV HHHHCCCCEECCCCCCHHHHHHHHCCCCCHHHEECCCCEEEEEECCCCEEEEECCEEEEE KTSFMYMFGYPTMTVSASSSASASFPTYMDFYVLVDNSPSQGLGATTADMTTLQNATTDT EEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCC CAFACHDTYTSSSKKTLQTNSYYDKAKKLGVTMRIDVVRSATQSLTDTATSSQIVSNQYR EEEEEECCCCCCCCCEEECCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHE MAVYSMGADCGSLGLTTVASLSSSMSSVKSSVGALDLMTIPYSGYNNDMCTDFDGTMSAM EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHH SGVIPTQGDGSSTNPQKWLFFVSDGVADYAYPTTCSKTTQSGGRCVEPLTTTTCTALKAR CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEEECCCHHHHHHHHHHC GIKIAVLYTTYLAITSNGYYNTWVKPWRDSIGTIMKSCASPGYYYEVDSSGSIGSALTAL CEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH FQQAIASAHLTK HHHHHHHHCCCC >Mature Secondary Structure PPACEYLSLLSRFRRNDSGNIAVIFAIALLPILAFIGSAIDYSMAVRAKAKLSASIDAA CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCHHHH LLAATGYTAMRGSSSDAKTAATNMFNGQMSAHKLTSNSLSIDITDSVSARTVTGSATVVV HHHHCCCCEECCCCCCHHHHHHHHCCCCCHHHEECCCCEEEEEECCCCEEEEECCEEEEE KTSFMYMFGYPTMTVSASSSASASFPTYMDFYVLVDNSPSQGLGATTADMTTLQNATTDT EEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCC CAFACHDTYTSSSKKTLQTNSYYDKAKKLGVTMRIDVVRSATQSLTDTATSSQIVSNQYR EEEEEECCCCCCCCCEEECCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHE MAVYSMGADCGSLGLTTVASLSSSMSSVKSSVGALDLMTIPYSGYNNDMCTDFDGTMSAM EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHH SGVIPTQGDGSSTNPQKWLFFVSDGVADYAYPTTCSKTTQSGGRCVEPLTTTTCTALKAR CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEEECCCHHHHHHHHHHC GIKIAVLYTTYLAITSNGYYNTWVKPWRDSIGTIMKSCASPGYYYEVDSSGSIGSALTAL CEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH FQQAIASAHLTK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA