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The map label for this gene is rbsB [C]

Identifier: 146338980

GI number: 146338980

Start: 2050231

End: 2051256

Strand: Direct

Name: rbsB [C]

Synonym: BRADO1927

Alternate gene names: 146338980

Gene position: 2050231-2051256 (Clockwise)

Preceding gene: 146338978

Following gene: 146338981

Centisome position: 27.5

GC content: 64.81

Gene sequence:

>1026_bases
ATGAAGTCCGGCATCGCCATCGCGGCCGTCTGCGCCGCCCTCAGCAGCACCATCATCGCCAACTCGGCGCTGGCCGACAC
CAGCGGAAAGAAGATCGCGTTTTCCAACAACTACGCCGGCAATTCCTGGCGCCAGGCGATGCTCAAGAGCTACGAGATCG
TCACCAAGAAGGCGGTCGCCGACAAGGTCGTCGCCGCGGCTGACATCTTCACCACAGCCGACAAGGAGGTGCCGACCCAG
GCGGCGCAGATTCAGAACCTGATCCTGCAGGGCTACGATGCGATCGTCATCAACGCTTCCTCGCCGGACGCCTTGAACGG
CGCCGTGAAGCAGGCCTGCGATGCCGGCATCGTCGTGGTGTCGTTCGACGGCATCGTCACCGAACCCTGCGCCTATCGCG
TCGTCGTCGACTTCAAGGCGATGGGCCGGCAGGAGGTCGAGGAGATGGCCAAGTTCCAGCCGAAGGGCGGCAATCTGCTC
GAGATTCGCGGCCTGGCCGGCACTTCGATCGACGAAGCCATTCATGCCGGCATCCTCGAAGGCGTGAAGGCGCATCCCGA
ATTCAAGATCGTCGGCTCGGTGACCGGCGACTGGGACCAGACCACGGCGCAGAAGGCGGTCGCCACCGTGCTGCCGTCGC
TGCCCGACATCGTCGGCGTCGTCGACCAGGGCGGCGACGGCTATGGCGCGGCGCAGGCCTTCGCCGCCGCCGGCAAGCCG
CGGCCCACCATCATCATGGGCAATCGCCAGGACGAGTTGCAGTGGTGGAAGGAGCAGAAGGCCAAGGACGGCTACAAGAC
GTGGTCCGCCTCGATCGCGCCGGGCGTCTCGACCTTGGCGTTCTGGGTCGCGCAGCAGGTGCTGGACGGCAACAAGTCGA
TTCCGCACGACCTGCTGGTGCCCTATCTCGCCTTCACTCAGGACAATTTCGAAACCGAGCTGCCCAACATCCCCAAGGGC
GGCGTGGCGAGCCACGAATACACCCAGGCCGAAGCGGTCGCTGCGATCAAGGCCAACATGAAGTGA

Upstream 100 bases:

>100_bases
CTTGTGGAACCAGGGCCGCAACGGTATCTTGAGGTGCGCTACTCAGACGCTTTGAAAAAACAATGCGGACCGCATGACGG
CCGCAGGGGAGGGTGAATCC

Downstream 100 bases:

>100_bases
CGGCTGAACGCGCGTGCTGTTTGCGAGCACAGGGGCCGGATGACCGCCACACGGTCTGAACTTGTGAGGCTGAGCGGCGT
CGAGAAATACTTCGGCGCCG

Product: putative ribose periplasmic binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Sugar ABC Transporter Periplasmic Protein; D-Ribose ABC Transporter Permease Protein; Sugar ABC Transporter; ABC Transporter Component

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKSGIAIAAVCAALSSTIIANSALADTSGKKIAFSNNYAGNSWRQAMLKSYEIVTKKAVADKVVAAADIFTTADKEVPTQ
AAQIQNLILQGYDAIVINASSPDALNGAVKQACDAGIVVVSFDGIVTEPCAYRVVVDFKAMGRQEVEEMAKFQPKGGNLL
EIRGLAGTSIDEAIHAGILEGVKAHPEFKIVGSVTGDWDQTTAQKAVATVLPSLPDIVGVVDQGGDGYGAAQAFAAAGKP
RPTIIMGNRQDELQWWKEQKAKDGYKTWSASIAPGVSTLAFWVAQQVLDGNKSIPHDLLVPYLAFTQDNFETELPNIPKG
GVASHEYTQAEAVAAIKANMK

Sequences:

>Translated_341_residues
MKSGIAIAAVCAALSSTIIANSALADTSGKKIAFSNNYAGNSWRQAMLKSYEIVTKKAVADKVVAAADIFTTADKEVPTQ
AAQIQNLILQGYDAIVINASSPDALNGAVKQACDAGIVVVSFDGIVTEPCAYRVVVDFKAMGRQEVEEMAKFQPKGGNLL
EIRGLAGTSIDEAIHAGILEGVKAHPEFKIVGSVTGDWDQTTAQKAVATVLPSLPDIVGVVDQGGDGYGAAQAFAAAGKP
RPTIIMGNRQDELQWWKEQKAKDGYKTWSASIAPGVSTLAFWVAQQVLDGNKSIPHDLLVPYLAFTQDNFETELPNIPKG
GVASHEYTQAEAVAAIKANMK
>Mature_341_residues
MKSGIAIAAVCAALSSTIIANSALADTSGKKIAFSNNYAGNSWRQAMLKSYEIVTKKAVADKVVAAADIFTTADKEVPTQ
AAQIQNLILQGYDAIVINASSPDALNGAVKQACDAGIVVVSFDGIVTEPCAYRVVVDFKAMGRQEVEEMAKFQPKGGNLL
EIRGLAGTSIDEAIHAGILEGVKAHPEFKIVGSVTGDWDQTTAQKAVATVLPSLPDIVGVVDQGGDGYGAAQAFAAAGKP
RPTIIMGNRQDELQWWKEQKAKDGYKTWSASIAPGVSTLAFWVAQQVLDGNKSIPHDLLVPYLAFTQDNFETELPNIPKG
GVASHEYTQAEAVAAIKANMK

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790192, Length=238, Percent_Identity=27.3109243697479, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36008; Mature: 36008

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGIAIAAVCAALSSTIIANSALADTSGKKIAFSNNYAGNSWRQAMLKSYEIVTKKAVA
CCCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
DKVVAAADIFTTADKEVPTQAAQIQNLILQGYDAIVINASSPDALNGAVKQACDAGIVVV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEE
SFDGIVTEPCAYRVVVDFKAMGRQEVEEMAKFQPKGGNLLEIRGLAGTSIDEAIHAGILE
EECCEEECCCEEEEEEEHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
GVKAHPEFKIVGSVTGDWDQTTAQKAVATVLPSLPDIVGVVDQGGDGYGAAQAFAAAGKP
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCC
RPTIIMGNRQDELQWWKEQKAKDGYKTWSASIAPGVSTLAFWVAQQVLDGNKSIPHDLLV
CCEEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
PYLAFTQDNFETELPNIPKGGVASHEYTQAEAVAAIKANMK
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSGIAIAAVCAALSSTIIANSALADTSGKKIAFSNNYAGNSWRQAMLKSYEIVTKKAVA
CCCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
DKVVAAADIFTTADKEVPTQAAQIQNLILQGYDAIVINASSPDALNGAVKQACDAGIVVV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEE
SFDGIVTEPCAYRVVVDFKAMGRQEVEEMAKFQPKGGNLLEIRGLAGTSIDEAIHAGILE
EECCEEECCCEEEEEEEHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
GVKAHPEFKIVGSVTGDWDQTTAQKAVATVLPSLPDIVGVVDQGGDGYGAAQAFAAAGKP
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCC
RPTIIMGNRQDELQWWKEQKAKDGYKTWSASIAPGVSTLAFWVAQQVLDGNKSIPHDLLV
CCEEEECCCHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
PYLAFTQDNFETELPNIPKGGVASHEYTQAEAVAAIKANMK
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA