| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338944
Identifier: 146338944
GI number: 146338944
Start: 2009774
End: 2010292
Strand: Direct
Name: 146338944
Synonym: BRADO1886
Alternate gene names: NA
Gene position: 2009774-2010292 (Clockwise)
Preceding gene: 146338942
Following gene: 146338948
Centisome position: 26.95
GC content: 64.55
Gene sequence:
>519_bases ATGTCAGGCTCTCACGACCACGCGCACGGCCACTCTCATGATCACGGCGACCAGCGCTGGAAACACGACGGTGTCCGCGT CGTTCCCGGCAATCAGCTCGACGGCAACGTACCGTCGACGCCGGGCATGGATCGCAAGGCGGCGATCAACTTCGCGCGCG TCGGCGCGCAGAAGCTGTGGGCCGGCACGGTCACGATCAAGCCTGACGCAAAGACCGGCGCGCATCATCATGGCCATCTC GAAAGCGTGATCTACGTGGTGAAGGGGAAGGCGCGGATGCGCTGGGGCGAGCAGTTGCAGTTCACCGCCGAAGCCGGCCC CGGCGACTTCATCTTCGTGCCGCCTTATGTGCCCCATCAGGAGATCAACGCCAGCCCCGACGAGGTGCTGGAATGCGTGC TGGTGCGCAGCGACGGCGAGGCGGTCGCGATCAACATCGATATCGAGCCGGTCGAAAAGCCGGAGACGGTGCTGTGGGTC GATCCGGTGCACCGGGATCCGGCCGAGACGAAATCTTAA
Upstream 100 bases:
>100_bases GATGCGGAAAGGTTCTGATGGAACCGCAATGGCGCTGACGCGGCATTTCGACTAGGATGCGCCGGTTCCTGCTGACCATC ACGCATTCGAGAAGAAGAAA
Downstream 100 bases:
>100_bases AGTCTCGAGGCCCAGTGGCGGGACCATCTCGCGATGGTCCCGCCGGGCAGGAGCGGCTGTACCGCTCCCTCACGCGCGGA GCAGGGGCGACTGTCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Mannose-6-Phosphate Isomerase Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSGSHDHAHGHSHDHGDQRWKHDGVRVVPGNQLDGNVPSTPGMDRKAAINFARVGAQKLWAGTVTIKPDAKTGAHHHGHL ESVIYVVKGKARMRWGEQLQFTAEAGPGDFIFVPPYVPHQEINASPDEVLECVLVRSDGEAVAINIDIEPVEKPETVLWV DPVHRDPAETKS
Sequences:
>Translated_172_residues MSGSHDHAHGHSHDHGDQRWKHDGVRVVPGNQLDGNVPSTPGMDRKAAINFARVGAQKLWAGTVTIKPDAKTGAHHHGHL ESVIYVVKGKARMRWGEQLQFTAEAGPGDFIFVPPYVPHQEINASPDEVLECVLVRSDGEAVAINIDIEPVEKPETVLWV DPVHRDPAETKS >Mature_171_residues SGSHDHAHGHSHDHGDQRWKHDGVRVVPGNQLDGNVPSTPGMDRKAAINFARVGAQKLWAGTVTIKPDAKTGAHHHGHLE SVIYVVKGKARMRWGEQLQFTAEAGPGDFIFVPPYVPHQEINASPDEVLECVLVRSDGEAVAINIDIEPVEKPETVLWVD PVHRDPAETKS
Specific function: Unknown
COG id: COG4101
COG function: function code G; Predicted mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18843; Mature: 18712
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSHDHAHGHSHDHGDQRWKHDGVRVVPGNQLDGNVPSTPGMDRKAAINFARVGAQKLW CCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHE AGTVTIKPDAKTGAHHHGHLESVIYVVKGKARMRWGEQLQFTAEAGPGDFIFVPPYVPHQ EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCC EINASPDEVLECVLVRSDGEAVAINIDIEPVEKPETVLWVDPVHRDPAETKS CCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SGSHDHAHGHSHDHGDQRWKHDGVRVVPGNQLDGNVPSTPGMDRKAAINFARVGAQKLW CCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHE AGTVTIKPDAKTGAHHHGHLESVIYVVKGKARMRWGEQLQFTAEAGPGDFIFVPPYVPHQ EEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCC EINASPDEVLECVLVRSDGEAVAINIDIEPVEKPETVLWVDPVHRDPAETKS CCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA