| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ywrD [H]
Identifier: 146338941
GI number: 146338941
Start: 2005862
End: 2007511
Strand: Direct
Name: ywrD [H]
Synonym: BRADO1881
Alternate gene names: 146338941
Gene position: 2005862-2007511 (Clockwise)
Preceding gene: 146338937
Following gene: 146338942
Centisome position: 26.9
GC content: 67.33
Gene sequence:
>1650_bases ATGTGCCATGTAGCCGGCCAGCACGGGCCGTCCGGCCCCAACGAGAGCACCCAGCGAGCCACGATGAGAAGCTTCCATTT CCCCGGCAGGTCCACGGTCCACGCCCAGAACGGAATGATTGCCACCTCGCATCCGCAGGCGGCGCTGGCCGGAATCGAGG TGCTGCGCGCCGGCGGCACCGCGGCCGACGCGGCGGTGGCCGCCTGCGCGCTGCTCGGCGTGATCGAGCCGCAGTCGACC GGCATCGGCGGCGACTGCTTCGCGCTGGTGCAGCCGAAGGGCGAGGGCCGGATCCTGGCCTATAACGGCTCCGGCCGGGC GCCGGCCGCGGCGACCGTCGACTGGTACCTCGAGCGCAAGATCCATTCGGTGCCGCTGACCTCGGCGCATGCCGTCTCCG TGCCCGGCGCGATCGATGCCTGGGCGCGCATCCTGCACGACCATGGCCGCCTCGGCCTCGACCGGCTGCTGCAGCCGGCG ATCCGCGCCGCCGAGGATGGCTATGTGGTGGCGCCGCGCGTCGCCTTCGACTGGAACAACCAGTTCGAGAAGCTCAAGAA CGGCACCAATACCGCGCGCTACTTCCTGCCGCACGGCAAGGCCGCCGTCGCGGGCGACGTGATCCGTCAGCCGGAGCTGG CGCAGACCTTGCGCGTCATCGCCAAGGAAGGTCCGAAGGGCTTTTATACCGGCGCGGTCGCCGAGGACATGGTGCAGACG CTGCGCAGCATCGGCGGTCTGCATACTTTGGAGGACTTCGCCAACCATCAGACCGAGGTGACCTCGCCGATCGGCACCAC CTACAAGGACTACGACGTCTGGCAGTGCCCTCCGAACGGCCCGGGCATCACCATGCTGGTCATGCTGAACATCCTCTCGC GCTTCGATCTGACCCGCATCGCGCCGCTCAGCATCGAGCGCTTTCATCTCGAAGCGGAGGCCGCGCGCATCGCCTACATG ATGCGCGAGCAGCACATCGGCGATCCCCAGCACATGACCACCGAGGTCGCGAGCATCCTCGCCAAGGAGTTCGCCGACGA GTACATTTCGCAGATCAGCCTCGACAAGCTGCTGGACCTGCCGAACGTCGCGCCGCCGATGAACCCGGAGACGGTGTACA TCACGGTGGTGGACCGCGACCGCAACGTCTGCTCCTTCATCAACTCGATCGCGCATTCGTTCGGCTCGGCGATCGTCTCC AACGAGACCGGCGTGCTGCTGCAGAACCGCGCCGGCGGCTTCCGCATCCAGCCCGGCCATCCGAACTGCATCGGTCCGGG CAAGCGCCCGCTGCACACCATCATCCCGGCGCTGGCCACCAAGGCTGGCCGCGCACAGATGTCGTTCGGCGTCATGGGCG GCCAGTATCAGCCGGTCGGACAGACCCATGTGCTGACCAACATCCTCGACTATGGCTGCGACGTGCAGGAAGCGATCGAT ATGGCGCGCGGTCTGCACTATGAAGGCGTCTATCAGCTCGAGGACGGTGTGCCGGCCGAGGTCGTCGAAGGCCTGCAGAA GATCGGCCACAAGACCACCAAGGTGGTCTCGCCGCTTGGCGGCGGCCAGGCGATCTGGATCGACTGGGACAAGGGCACGC TCACCGGCGGCTCCGACCCGCGCAAGGACGGCTGCGCGCTGGGGTATTGA
Upstream 100 bases:
>100_bases ACTGATAGAGGGCGGCGACCGTCAGGGACATGCGGCCGTTTAGCAGCAGACCTGACCATAGAAAAGCTGGTATCCGCGGG CATTGCCGAGGCCGGAAGGA
Downstream 100 bases:
>100_bases GGCGGGCGCGTATGTCGTCACGCGCCGACCCGTACGGTGGGCAAAGGCGCGCCACGATCTATCGGGTGTGGCATGTTCTC TCCCGCGCCGTGCCCACCGT
Product: putative gamma-glutamyltranspeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MCHVAGQHGPSGPNESTQRATMRSFHFPGRSTVHAQNGMIATSHPQAALAGIEVLRAGGTAADAAVAACALLGVIEPQST GIGGDCFALVQPKGEGRILAYNGSGRAPAAATVDWYLERKIHSVPLTSAHAVSVPGAIDAWARILHDHGRLGLDRLLQPA IRAAEDGYVVAPRVAFDWNNQFEKLKNGTNTARYFLPHGKAAVAGDVIRQPELAQTLRVIAKEGPKGFYTGAVAEDMVQT LRSIGGLHTLEDFANHQTEVTSPIGTTYKDYDVWQCPPNGPGITMLVMLNILSRFDLTRIAPLSIERFHLEAEAARIAYM MREQHIGDPQHMTTEVASILAKEFADEYISQISLDKLLDLPNVAPPMNPETVYITVVDRDRNVCSFINSIAHSFGSAIVS NETGVLLQNRAGGFRIQPGHPNCIGPGKRPLHTIIPALATKAGRAQMSFGVMGGQYQPVGQTHVLTNILDYGCDVQEAID MARGLHYEGVYQLEDGVPAEVVEGLQKIGHKTTKVVSPLGGGQAIWIDWDKGTLTGGSDPRKDGCALGY
Sequences:
>Translated_549_residues MCHVAGQHGPSGPNESTQRATMRSFHFPGRSTVHAQNGMIATSHPQAALAGIEVLRAGGTAADAAVAACALLGVIEPQST GIGGDCFALVQPKGEGRILAYNGSGRAPAAATVDWYLERKIHSVPLTSAHAVSVPGAIDAWARILHDHGRLGLDRLLQPA IRAAEDGYVVAPRVAFDWNNQFEKLKNGTNTARYFLPHGKAAVAGDVIRQPELAQTLRVIAKEGPKGFYTGAVAEDMVQT LRSIGGLHTLEDFANHQTEVTSPIGTTYKDYDVWQCPPNGPGITMLVMLNILSRFDLTRIAPLSIERFHLEAEAARIAYM MREQHIGDPQHMTTEVASILAKEFADEYISQISLDKLLDLPNVAPPMNPETVYITVVDRDRNVCSFINSIAHSFGSAIVS NETGVLLQNRAGGFRIQPGHPNCIGPGKRPLHTIIPALATKAGRAQMSFGVMGGQYQPVGQTHVLTNILDYGCDVQEAID MARGLHYEGVYQLEDGVPAEVVEGLQKIGHKTTKVVSPLGGGQAIWIDWDKGTLTGGSDPRKDGCALGY >Mature_549_residues MCHVAGQHGPSGPNESTQRATMRSFHFPGRSTVHAQNGMIATSHPQAALAGIEVLRAGGTAADAAVAACALLGVIEPQST GIGGDCFALVQPKGEGRILAYNGSGRAPAAATVDWYLERKIHSVPLTSAHAVSVPGAIDAWARILHDHGRLGLDRLLQPA IRAAEDGYVVAPRVAFDWNNQFEKLKNGTNTARYFLPHGKAAVAGDVIRQPELAQTLRVIAKEGPKGFYTGAVAEDMVQT LRSIGGLHTLEDFANHQTEVTSPIGTTYKDYDVWQCPPNGPGITMLVMLNILSRFDLTRIAPLSIERFHLEAEAARIAYM MREQHIGDPQHMTTEVASILAKEFADEYISQISLDKLLDLPNVAPPMNPETVYITVVDRDRNVCSFINSIAHSFGSAIVS NETGVLLQNRAGGFRIQPGHPNCIGPGKRPLHTIIPALATKAGRAQMSFGVMGGQYQPVGQTHVLTNILDYGCDVQEAID MARGLHYEGVYQLEDGVPAEVVEGLQKIGHKTTKVVSPLGGGQAIWIDWDKGTLTGGSDPRKDGCALGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=536, Percent_Identity=28.1716417910448, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI73915090, Length=536, Percent_Identity=28.1716417910448, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI73915096, Length=536, Percent_Identity=28.1716417910448, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI73915094, Length=536, Percent_Identity=28.1716417910448, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI113429324, Length=534, Percent_Identity=27.5280898876405, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI113429326, Length=539, Percent_Identity=27.0871985157699, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI109148539, Length=511, Percent_Identity=28.1800391389432, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI153266885, Length=535, Percent_Identity=27.1028037383178, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI153266901, Length=539, Percent_Identity=27.0871985157699, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI153266907, Length=534, Percent_Identity=26.2172284644195, Blast_Score=124, Evalue=3e-28, Organism=Escherichia coli, GI1789856, Length=541, Percent_Identity=31.9778188539741, Blast_Score=265, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17506189, Length=497, Percent_Identity=27.1629778672032, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI72000294, Length=506, Percent_Identity=25.8893280632411, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI212646519, Length=506, Percent_Identity=25.8893280632411, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17542894, Length=513, Percent_Identity=25.3411306042885, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI193208245, Length=566, Percent_Identity=23.6749116607774, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI193208247, Length=566, Percent_Identity=23.6749116607774, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323330, Length=522, Percent_Identity=22.7969348659004, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI161077880, Length=543, Percent_Identity=25.414364640884, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI45551474, Length=543, Percent_Identity=25.414364640884, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI161077878, Length=543, Percent_Identity=25.414364640884, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24642670, Length=543, Percent_Identity=25.414364640884, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24642666, Length=543, Percent_Identity=25.414364640884, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI18859893, Length=520, Percent_Identity=25.7692307692308, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI18859741, Length=531, Percent_Identity=25.6120527306968, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI161077496, Length=501, Percent_Identity=25.748502994012, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58931; Mature: 58931
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCHVAGQHGPSGPNESTQRATMRSFHFPGRSTVHAQNGMIATSHPQAALAGIEVLRAGGT CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCC AADAAVAACALLGVIEPQSTGIGGDCFALVQPKGEGRILAYNGSGRAPAAATVDWYLERK HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH IHSVPLTSAHAVSVPGAIDAWARILHDHGRLGLDRLLQPAIRAAEDGYVVAPRVAFDWNN HHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECEEEECCCH QFEKLKNGTNTARYFLPHGKAAVAGDVIRQPELAQTLRVIAKEGPKGFYTGAVAEDMVQT HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LRSIGGLHTLEDFANHQTEVTSPIGTTYKDYDVWQCPPNGPGITMLVMLNILSRFDLTRI HHHHCCHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHC APLSIERFHLEAEAARIAYMMREQHIGDPQHMTTEVASILAKEFADEYISQISLDKLLDL CCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNVAPPMNPETVYITVVDRDRNVCSFINSIAHSFGSAIVSNETGVLLQNRAGGFRIQPGH CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCC PNCIGPGKRPLHTIIPALATKAGRAQMSFGVMGGQYQPVGQTHVLTNILDYGCDVQEAID CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHH MARGLHYEGVYQLEDGVPAEVVEGLQKIGHKTTKVVSPLGGGQAIWIDWDKGTLTGGSDP HHHCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCEECCCCCC RKDGCALGY CCCCCCCCC >Mature Secondary Structure MCHVAGQHGPSGPNESTQRATMRSFHFPGRSTVHAQNGMIATSHPQAALAGIEVLRAGGT CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCC AADAAVAACALLGVIEPQSTGIGGDCFALVQPKGEGRILAYNGSGRAPAAATVDWYLERK HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH IHSVPLTSAHAVSVPGAIDAWARILHDHGRLGLDRLLQPAIRAAEDGYVVAPRVAFDWNN HHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECEEEECCCH QFEKLKNGTNTARYFLPHGKAAVAGDVIRQPELAQTLRVIAKEGPKGFYTGAVAEDMVQT HHHHHHCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LRSIGGLHTLEDFANHQTEVTSPIGTTYKDYDVWQCPPNGPGITMLVMLNILSRFDLTRI HHHHCCHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHC APLSIERFHLEAEAARIAYMMREQHIGDPQHMTTEVASILAKEFADEYISQISLDKLLDL CCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNVAPPMNPETVYITVVDRDRNVCSFINSIAHSFGSAIVSNETGVLLQNRAGGFRIQPGH CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCC PNCIGPGKRPLHTIIPALATKAGRAQMSFGVMGGQYQPVGQTHVLTNILDYGCDVQEAID CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHH MARGLHYEGVYQLEDGVPAEVVEGLQKIGHKTTKVVSPLGGGQAIWIDWDKGTLTGGSDP HHHCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCEECCCCCC RKDGCALGY CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]