| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is vanA [H]
Identifier: 146338927
GI number: 146338927
Start: 1992523
End: 1993566
Strand: Direct
Name: vanA [H]
Synonym: BRADO1867
Alternate gene names: 146338927
Gene position: 1992523-1993566 (Clockwise)
Preceding gene: 146338926
Following gene: 146338928
Centisome position: 26.72
GC content: 66.19
Gene sequence:
>1044_bases ATGGCTGCTTCATTCCCCATGAATGCCTGGTACGCCGCGGCCTGGGATGCCGAGGTCAAGCAGGCTCTGCTGCCCCGCAC CATCTGCGGCAAGCATGTCGTGATGTACCGCAAGGCCGACGGCGCGATCGCCGCGCTCGAGGATGCGTGCTGGCACCGGC TCGTCCCGCTGTCGAAGGGGCGGCTCGAAGGCGATACCGTCGTGTGCGGCTATCACGGGCTGAAGTTCAGCCCGCAGGGC CGCTGCACCTACATGCCCTCGCAGGAGACCATCAACCCGTCCGCTTGCGTGCGCGCTTATCCGGCCGTCGAGCGCCATCG TTTCATCTGGCTGTGGATGGGCGATCCGGCGCTGGCCGATCCGGCCACCATTCCCGACATGCACTGGAATCACGATCCGG CCTGGGCCGGCGACGGCAAGACCATCCAGGTGAAGTGCGACTACCGGCTCGTCGTCGACAATCTGATGGATTTGACGCAC GAGACCTTCGTGCACGGCTCGTCCATCGGCAATGACGCGGTGGCGGAGGCGCCGTTCGACGTCACTCATGGCGAGCGCAC CGCGACGGTGACGCGCTGGATGCGCGGCATCGAGCCGCCGCCGTTCTGGGCCAAGCAGCTCGGCAAGCCGGGCCTGGTCG ACCGCTGGCAGATCATCCGCTTCGAGTCGCCGTGCACCGTGACGATCGACGTCGGCGTGGCGCCGACCGGGACCGGCGCG CCGGAGGGCGACCGCTCGCAAGGGGTGAACGGCATGGTGCTCAACACGATCACGCCGGAGACCGACAAGACCTGCCACTA TTTCTGGGCCTTCGCCCGCAACTACAAGCTTTCCGAGCAGCGGCTGACGACGGAGATCCGCGAAGGCGTGTCCGGCATCT TCCGCGAGGACGAATTCATCCTCGAAGCACAGCAGCGCGCGATGGACGAGAACCCGGGGCGCGTTTTCTACAATCTCAAC ATCGATGCAGGGGCGATGTGGGCACGGCGGATCATCGACCGGATGATCGCGCGTGAAACGCCGCTGCGCGAAGCGGCGGA GTGA
Upstream 100 bases:
>100_bases AGTGGTTAGCCATCGCCGAAAAATGCAGGAACTTGCGCCTTCGGGCCCAGTTGCTGTATACAATAATCGAGTTGGACGTA TACCGACACGAGGAAACGCG
Downstream 100 bases:
>100_bases ATCGAATGGCAGAGCGTGACAATGAACGCTCGATCTCGCAAACCGTCCGCGCACAGCTCACGCTGCGCGATATGATCCTC ACCGGTGGCTTGCGCCCGGG
Product: vanillate O-demethylase oxygenase, iron-sulfur subunit
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAASFPMNAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFSPQG RCTYMPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIPDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTH ETFVHGSSIGNDAVAEAPFDVTHGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGA PEGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFILEAQQRAMDENPGRVFYNLN IDAGAMWARRIIDRMIARETPLREAAE
Sequences:
>Translated_347_residues MAASFPMNAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFSPQG RCTYMPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIPDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTH ETFVHGSSIGNDAVAEAPFDVTHGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGA PEGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFILEAQQRAMDENPGRVFYNLN IDAGAMWARRIIDRMIARETPLREAAE >Mature_346_residues AASFPMNAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFSPQGR CTYMPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIPDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHE TFVHGSSIGNDAVAEAPFDVTHGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGAP EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFILEAQQRAMDENPGRVFYNLNI DAGAMWARRIIDRMIARETPLREAAE
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 38936; Mature: 38804
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASFPMNAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKG CCCCCCCCCEEEEECCHHHHHHHCCHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCC RLEGDTVVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGDPALAD CCCCCEEEEECCCCEECCCCCEEECCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCC PATIPDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFD CCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VTHGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGA CCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC PEGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFI CCCCHHCCCCCEEEEEECCCCCCCHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH LEAQQRAMDENPGRVFYNLNIDAGAMWARRIIDRMIARETPLREAAE HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure AASFPMNAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKG CCCCCCCCEEEEECCHHHHHHHCCHHHCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCC RLEGDTVVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGDPALAD CCCCCEEEEECCCCEECCCCCEEECCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCC PATIPDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFD CCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VTHGERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGA CCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC PEGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFI CCCCHHCCCCCEEEEEECCCCCCCHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH LEAQQRAMDENPGRVFYNLNIDAGAMWARRIIDRMIARETPLREAAE HHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3170489 [H]