| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338803
Identifier: 146338803
GI number: 146338803
Start: 1860012
End: 1860845
Strand: Reverse
Name: 146338803
Synonym: BRADO1737
Alternate gene names: NA
Gene position: 1860845-1860012 (Counterclockwise)
Preceding gene: 146338805
Following gene: 146338802
Centisome position: 24.96
GC content: 68.11
Gene sequence:
>834_bases GTGACCATGGACCTGAACACCATTACCGAGGTCGTGCGCCCGAGAACGCGGGCGGAGCTGCCCAGCTGGAAGGCAGGCGA TGCCTGGCTGGCTGGCGGCACCTGGCTGTTCTCCGAGCCGCAGACGCAGCTGTCGCGGCTGATCGATCTCAGCGATCTCG CCTGGCCTGCACTCGCAATCGGCGATCACGGCCTGACCATCGCCGCGACCTGCAGCGTCGCCGAGCTCGATGAGCTGCCA TGCCCGGCCGACTGGATCGCGGCGCCGCTGATCGACCAATGCTGCCGCGCGTTCCTGGCGTCGTTCAAGATCTGGAAGAC GGCGACCGTCGGCGGCAATCTCTGCATGTCGCTGCCGGCCGGGCCGATGATCTCGCTGCTCGCCGCGCTCGAAGGCGTCT GCACGATCTGGAAAACTGACGGCAGCGAGCAGCGCGTCGCAGTTGCCGACTTCGTCACCGGCAACAACCGCAACGTGCTC GCGCCCGGCGACCTGCTGCGGCAGATCGACGTGCCGCTCGCCGCTTTGAGGCGCCGCACCGCCTTTCGCCAGATCGCGCT GACGCCGGTCGGCCGCTCCGGCGCGCTGCTGATCGGCACGGCCGGCCGCGACGGCGACCTGCTGCTCACGGTTACCGGAT CAACGGTGAAGCCGTTGCAGCTCCGCTTTGCCACGATGGTCGACGCGGTCGCGCTGCGCGCGGGCGTCCTCAGCGATATT CCAGATGCGCTCTATCATGACGACGTCCATGGCAAGCCTGCCTGGCGCAAAGCGATGACCTTGCGTCTCGCCGAGGAGAT CCGCGCCGAGCTCGCAGGCGGCATCAGGCCATGA
Upstream 100 bases:
>100_bases TTGCGGATGGCTTGCAAGCCAAAGGCCAACGCATCCTATTGCCAGTTGGCGCCGGTCTTGCAAGGATTTCACCGGCGACC GGCGTCGTCATTGAGCTTGC
Downstream 100 bases:
>100_bases GCGTGATCGTCGATGGCAAGGCGGTCGATGCCGCGCCCCGCCCGGGGCAGTGCCTGCGCACGTTCCTGCGCGACACCGGC CATTTCGGCGTCAAGAAGGG
Product: putative oxidoreductase
Products: NA
Alternate protein names: Xanthine Dehydrogenase Subunit; Molybdopterin Dehydrogenase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTMDLNTITEVVRPRTRAELPSWKAGDAWLAGGTWLFSEPQTQLSRLIDLSDLAWPALAIGDHGLTIAATCSVAELDELP CPADWIAAPLIDQCCRAFLASFKIWKTATVGGNLCMSLPAGPMISLLAALEGVCTIWKTDGSEQRVAVADFVTGNNRNVL APGDLLRQIDVPLAALRRRTAFRQIALTPVGRSGALLIGTAGRDGDLLLTVTGSTVKPLQLRFATMVDAVALRAGVLSDI PDALYHDDVHGKPAWRKAMTLRLAEEIRAELAGGIRP
Sequences:
>Translated_277_residues MTMDLNTITEVVRPRTRAELPSWKAGDAWLAGGTWLFSEPQTQLSRLIDLSDLAWPALAIGDHGLTIAATCSVAELDELP CPADWIAAPLIDQCCRAFLASFKIWKTATVGGNLCMSLPAGPMISLLAALEGVCTIWKTDGSEQRVAVADFVTGNNRNVL APGDLLRQIDVPLAALRRRTAFRQIALTPVGRSGALLIGTAGRDGDLLLTVTGSTVKPLQLRFATMVDAVALRAGVLSDI PDALYHDDVHGKPAWRKAMTLRLAEEIRAELAGGIRP >Mature_276_residues TMDLNTITEVVRPRTRAELPSWKAGDAWLAGGTWLFSEPQTQLSRLIDLSDLAWPALAIGDHGLTIAATCSVAELDELPC PADWIAAPLIDQCCRAFLASFKIWKTATVGGNLCMSLPAGPMISLLAALEGVCTIWKTDGSEQRVAVADFVTGNNRNVLA PGDLLRQIDVPLAALRRRTAFRQIALTPVGRSGALLIGTAGRDGDLLLTVTGSTVKPLQLRFATMVDAVALRAGVLSDIP DALYHDDVHGKPAWRKAMTLRLAEEIRAELAGGIRP
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29699; Mature: 29568
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDLNTITEVVRPRTRAELPSWKAGDAWLAGGTWLFSEPQTQLSRLIDLSDLAWPALAI CCCCHHHHHHHHCCHHHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHCCCEEEE GDHGLTIAATCSVAELDELPCPADWIAAPLIDQCCRAFLASFKIWKTATVGGNLCMSLPA CCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCC GPMISLLAALEGVCTIWKTDGSEQRVAVADFVTGNNRNVLAPGDLLRQIDVPLAALRRRT CHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEECCCCCEECHHHHHHHHCCCHHHHHHHH AFRQIALTPVGRSGALLIGTAGRDGDLLLTVTGSTVKPLQLRFATMVDAVALRAGVLSDI HHHHHEEEECCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDALYHDDVHGKPAWRKAMTLRLAEEIRAELAGGIRP CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TMDLNTITEVVRPRTRAELPSWKAGDAWLAGGTWLFSEPQTQLSRLIDLSDLAWPALAI CCCHHHHHHHHCCHHHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHCCCEEEE GDHGLTIAATCSVAELDELPCPADWIAAPLIDQCCRAFLASFKIWKTATVGGNLCMSLPA CCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCC GPMISLLAALEGVCTIWKTDGSEQRVAVADFVTGNNRNVLAPGDLLRQIDVPLAALRRRT CHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEECCCCCEECHHHHHHHHCCCHHHHHHHH AFRQIALTPVGRSGALLIGTAGRDGDLLLTVTGSTVKPLQLRFATMVDAVALRAGVLSDI HHHHHEEEECCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDALYHDDVHGKPAWRKAMTLRLAEEIRAELAGGIRP CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA