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The map label for this gene is ppsR1 [H]

Identifier: 146338703

GI number: 146338703

Start: 1750716

End: 1752143

Strand: Reverse

Name: ppsR1 [H]

Synonym: BRADO1635

Alternate gene names: 146338703

Gene position: 1752143-1750716 (Counterclockwise)

Preceding gene: 146338704

Following gene: 146338702

Centisome position: 23.5

GC content: 65.62

Gene sequence:

>1428_bases
GTGAGGGCGTTCAGAGCTCCGAAAGAGTCGCTTGGCGATCTCAATGCGGATGTTGCGGCCATGCTGGTGGCTGCAGCCTC
CGACATTGCGCTCGCGCTCGACGCCGACGGCAACATCCAGGATCTGGCCTTTCAGCAGGCCGGTCTCCCGCTTGAATTGA
AAAACACAGACGAGTGGATCGGCCGATCCTGGCAAGCAACAGTGTCCGAGGAAAGCCAGACCAAGCCAGAGCTGCTGCTT
GCCGAAGCCTCGGAGCGCAAGGTGTCGCGCTGGCGCGAGGTGCGCTACCCGGCCGCGCGCGGGCCTGACATCCCGATCCT
GTTCGCGGTCGTCGCGATCAAGGGCGCGGCCCGCTACATCGCGGTCGGCCGCGATGTGCGCGCCACCGCAGCCCTCCAGC
AGAAGCTGATCGAGGCGCAGGTTGCGATCGAGCGCGACTACTCGCGCATGCGCAATGCCGAATCGCGCTACCGTATCCTG
TTTCAGATCACCGCCGAGCCGGTCCTGATCATCGATGCGGCGAGCCATCGCATCGTCGAGGCCAATCCGGCCGCCGCCGC
TTTGCTCGACCACGGCGCCGCCAACCTGATCGGCAAGCTGTTTCCCGACGCGCTGCTGATCGACGATCTGGCGATGTCAC
AATCGCTGTCGCTGGCGATCCGCTCGCAGGGCAAGATCGAGCGCGCCAAGGTGACGCTCGACGGTGGCCGCGACTATCTG
CTCGACGGCACCTTCTTCCGGCAGGACACCTCCTCGTTCTTCCTGCTGCGGTTCTCGCCGCAATACGGCCAGCCGGCGCT
GCCGAAGGCGTCCGACGTCAACACCCAGCTGGTGCAGTTCGTCGAATCGGCGCCCGACGGCTTCGTCATCACCGACATGG
ATGGCCGCCTGCTGCACGCCAACGCCACCTTCCTGCAGCTCGCCCAGATCGAGAACATGCACCAGATCATGGGCGAGACG
ATCGACCGCTGGATCGGCAAGTCGGCGGTCGACTTCTCGGTGATGCTGACCAATCTGCGCCAGCACGGCACCTTGAAGCT
GTTCTCCAGCGTGGTCCGGGGCGAGCACGGCTCGCCGGTCGATGTCGAGATCTCGGCGACCACGGTCGGCGCGCCCGGCC
AGGCCCGGCTCGGCTTCACCATTCGCAATGTCGGCCCGCGCATCTCCCCCGACGGCGCCGATCACGCCTTCATTCCGCGC
TCGCGCGAGCAGCTCGCCGAACTGATTGGCCGCGTGCCGCTGAAGGAGCTGGTGCGCGAGACCACCGACGTGATCGAGCG
GATGTGCATCGAGACCGCGCTCAAGCTGACCGGAGACAACCGCGCCACCGCAGCCGAAATGCTCGGCCTCAGCCGCCAGA
GCCTCTACGTCAAGCTCAGACGCTACGGCATGGCCGAGCCAAGCGAAGAAGACAGTCAGTTGGAATAG

Upstream 100 bases:

>100_bases
CTGCTGACCGAACGGCGATAGCTTTAGGGTGCAGTGAAGATGAATGCTGGAACGAGACTTGCCGCGCGAAGGCTCCTTGA
TTGGGAGGACAACGGCGTTG

Downstream 100 bases:

>100_bases
TGGGAAGAGTTCTGCAATGACCGAGATCGCGCCCGTCCCGCTCGCCCCGGAGCTTCGTTCAAGGGGTCCTTCAAGGCTCC
AGCCTTCGGCCGTTCTCGAA

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MRAFRAPKESLGDLNADVAAMLVAAASDIALALDADGNIQDLAFQQAGLPLELKNTDEWIGRSWQATVSEESQTKPELLL
AEASERKVSRWREVRYPAARGPDIPILFAVVAIKGAARYIAVGRDVRATAALQQKLIEAQVAIERDYSRMRNAESRYRIL
FQITAEPVLIIDAASHRIVEANPAAAALLDHGAANLIGKLFPDALLIDDLAMSQSLSLAIRSQGKIERAKVTLDGGRDYL
LDGTFFRQDTSSFFLLRFSPQYGQPALPKASDVNTQLVQFVESAPDGFVITDMDGRLLHANATFLQLAQIENMHQIMGET
IDRWIGKSAVDFSVMLTNLRQHGTLKLFSSVVRGEHGSPVDVEISATTVGAPGQARLGFTIRNVGPRISPDGADHAFIPR
SREQLAELIGRVPLKELVRETTDVIERMCIETALKLTGDNRATAAEMLGLSRQSLYVKLRRYGMAEPSEEDSQLE

Sequences:

>Translated_475_residues
MRAFRAPKESLGDLNADVAAMLVAAASDIALALDADGNIQDLAFQQAGLPLELKNTDEWIGRSWQATVSEESQTKPELLL
AEASERKVSRWREVRYPAARGPDIPILFAVVAIKGAARYIAVGRDVRATAALQQKLIEAQVAIERDYSRMRNAESRYRIL
FQITAEPVLIIDAASHRIVEANPAAAALLDHGAANLIGKLFPDALLIDDLAMSQSLSLAIRSQGKIERAKVTLDGGRDYL
LDGTFFRQDTSSFFLLRFSPQYGQPALPKASDVNTQLVQFVESAPDGFVITDMDGRLLHANATFLQLAQIENMHQIMGET
IDRWIGKSAVDFSVMLTNLRQHGTLKLFSSVVRGEHGSPVDVEISATTVGAPGQARLGFTIRNVGPRISPDGADHAFIPR
SREQLAELIGRVPLKELVRETTDVIERMCIETALKLTGDNRATAAEMLGLSRQSLYVKLRRYGMAEPSEEDSQLE
>Mature_475_residues
MRAFRAPKESLGDLNADVAAMLVAAASDIALALDADGNIQDLAFQQAGLPLELKNTDEWIGRSWQATVSEESQTKPELLL
AEASERKVSRWREVRYPAARGPDIPILFAVVAIKGAARYIAVGRDVRATAALQQKLIEAQVAIERDYSRMRNAESRYRIL
FQITAEPVLIIDAASHRIVEANPAAAALLDHGAANLIGKLFPDALLIDDLAMSQSLSLAIRSQGKIERAKVTLDGGRDYL
LDGTFFRQDTSSFFLLRFSPQYGQPALPKASDVNTQLVQFVESAPDGFVITDMDGRLLHANATFLQLAQIENMHQIMGET
IDRWIGKSAVDFSVMLTNLRQHGTLKLFSSVVRGEHGSPVDVEISATTVGAPGQARLGFTIRNVGPRISPDGADHAFIPR
SREQLAELIGRVPLKELVRETTDVIERMCIETALKLTGDNRATAAEMLGLSRQSLYVKLRRYGMAEPSEEDSQLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR011785 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 52130; Mature: 52130

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFRAPKESLGDLNADVAAMLVAAASDIALALDADGNIQDLAFQQAGLPLELKNTDEWI
CCCCCCCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCEEECCCHHHH
GRSWQATVSEESQTKPELLLAEASERKVSRWREVRYPAARGPDIPILFAVVAIKGAARYI
CCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEE
AVGRDVRATAALQQKLIEAQVAIERDYSRMRNAESRYRILFQITAEPVLIIDAASHRIVE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCEEEE
ANPAAAALLDHGAANLIGKLFPDALLIDDLAMSQSLSLAIRSQGKIERAKVTLDGGRDYL
CCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCEEE
LDGTFFRQDTSSFFLLRFSPQYGQPALPKASDVNTQLVQFVESAPDGFVITDMDGRLLHA
ECCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEC
NATFLQLAQIENMHQIMGETIDRWIGKSAVDFSVMLTNLRQHGTLKLFSSVVRGEHGSPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
DVEISATTVGAPGQARLGFTIRNVGPRISPDGADHAFIPRSREQLAELIGRVPLKELVRE
EEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
TTDVIERMCIETALKLTGDNRATAAEMLGLSRQSLYVKLRRYGMAEPSEEDSQLE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAFRAPKESLGDLNADVAAMLVAAASDIALALDADGNIQDLAFQQAGLPLELKNTDEWI
CCCCCCCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCEEECCCHHHH
GRSWQATVSEESQTKPELLLAEASERKVSRWREVRYPAARGPDIPILFAVVAIKGAARYI
CCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEE
AVGRDVRATAALQQKLIEAQVAIERDYSRMRNAESRYRILFQITAEPVLIIDAASHRIVE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCEEEE
ANPAAAALLDHGAANLIGKLFPDALLIDDLAMSQSLSLAIRSQGKIERAKVTLDGGRDYL
CCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCEEE
LDGTFFRQDTSSFFLLRFSPQYGQPALPKASDVNTQLVQFVESAPDGFVITDMDGRLLHA
ECCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEC
NATFLQLAQIENMHQIMGETIDRWIGKSAVDFSVMLTNLRQHGTLKLFSSVVRGEHGSPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE
DVEISATTVGAPGQARLGFTIRNVGPRISPDGADHAFIPRSREQLAELIGRVPLKELVRE
EEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
TTDVIERMCIETALKLTGDNRATAAEMLGLSRQSLYVKLRRYGMAEPSEEDSQLE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA