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The map label for this gene is mcpa [H]

Identifier: 146338640

GI number: 146338640

Start: 1682346

End: 1684127

Strand: Direct

Name: mcpa [H]

Synonym: BRADO1571

Alternate gene names: 146338640

Gene position: 1682346-1684127 (Clockwise)

Preceding gene: 146338639

Following gene: 146338641

Centisome position: 22.56

GC content: 66.11

Gene sequence:

>1782_bases
ATGGAGCCTTCCTTAAGCATCACCCATCAATTGTCCCCGCATCTGGCCAAGGGGCCGCTTCAACGGCGAATGCGGGGACG
GGCAATGGGTTTTCTCGATCATCTCAAGATCGTGTGGAAGATTGGTCTCATTGTTACGGTGCTGGCGATCACCGTCGTCG
GCGTGGCCGCATTGGGGATCCAGCAACTCTCCGAGACGATCGACGACTTCAGCGGCCTTTCCGCGGAGCAATCCGTCAAC
CTCGCGGTCTCGCGCTCGCAGCGCCGGCTCGAGACCTATCATGCCGCGATCTACGCGACGTTGACCGAGAGCACCGCAGA
AGGCAACGCTCGGCGACTCAAGACGGGCACGCAATCACGTGATGAGATTCAAGGACTGCTGGACGGCGCGCTCAAGGAGA
ACACATCGCTCAGCGCCGATGTCAACGCGATCGCGGCCGGGTTCAAGTCCGCCTTCGCGGCTTGTGATCCGGTTCTTGAA
GCCGGCGCGAAGGCGACGACGGCCGAGGACAATGCCAAGGTCGCCGAGCGCGCGCACAGCGCGTGTGATCCCGTCATCGA
CAAGGTTCTCGAGGACACCCAGAAGTTCTCGCGCCGGAACATCGATCGCGTCGCGAAGGCGCGCGAAACCATCAAATACG
AAGCACGGGGCTCGATCCGGCTCGTCATGATGGCAGGCGGCATCGGCGTGGTGCTCGGGACGTTGATTGCGCTGTTCATC
GGCGTCAAGTCGCTGTCGCAGCCGATCGCGCGGCTGAAGATCGCGATGGAGCGTCTTGCCGGAAATGATCTGGCCATTGC
GGTGCCCGAGACCGGGCGCGGCGACGAGATCGGCGACATGGCCAAGACGGTCGAGACGTTCAAGACGAACGGCCTCGAGG
TCGCCCGGCTGAAACAGGCGCAGGAGGAATCCGCGCGGCAGAGCGCCGAGCAGCGCCGCCGCGACATGCACGACCTCGCC
AACCGGTTCGAGCAGGCGGTCGGCGAGATCGTCCAGACGGTCTCCTCGGCGTCGACCGAGCTGGAGGCCTCCGCCAACAC
GCTGAACACCACCGCCGACCGTGCGCAGCGGTTGACGAGCGTCGTGGCCTCGGCGTCGGAGGAGGCATCGGCCAACGTCC
ATTCGGTCGCCTCGGCCGCGGAGGAGCTGTCGTCCTCGGTCAACGAGATCAGTCGCCAGGTGCAGGAATCGGCGCGCATG
GCGGGCGAGGCCGTCACCCAGGCCCGCAAGACCAACGATCGTGTCAGCGAGCTGTCGAAGGCCGCGGCGCGGATCGGCGA
CGTCGTCGAGCTGATCAACACCATCGCCGGCCAGACCAATCTGCTGGCGCTCAATGCGACGATCGAGGCGGCGCGGGCCG
GCGAGGCGGGACGCGGCTTCGCGGTCGTCGCCACCGAGGTCAAGGCGCTCGCCGAGCAGACGGCCAAGGCAACCGGCGAG
ATTGGCCAGCAGATCTCGGGCATTCAGACGGCGACGCAGGAGTCGGTCGGCGCCATCAAGGAGATCTCCGGCACCATCGA
GCGTCTCGCGGAGATCGCCTCGACGATCGCGGCCGCCGTCGAGGAGCAGGGCGCGGCCACTCAGGAAATCTCCCGCAACG
TGCAGCAGGCCTCGCGCGGAACGCAAGACGTCTCCACCAACATCGTCGACGTCCAGCGCGGCGCCTCCGAAACCGGCTCG
GCGTCGTCGCAGGTCCTGTCAGCCGCGAAGACTCTGTCGACCGACAGCGAGCGGCTGCGCGGCGAGATCTCGAGGTTCCT
CAGCACCGTGCGTGCGGCCTGA

Upstream 100 bases:

>100_bases
GGGGTTCGAGGAGGCGCGGTGACGCGCGAAGCCGGCCGTGACGAAAGTAATGGATCTGCTCTGAAATCAGGCACCACCCC
GGGGTTCCACGGTTCCATAA

Downstream 100 bases:

>100_bases
GCCCGCCCGGAACGCAAGGCGCGGACCGGGGATGCTGGCTTTTCACGGGTGAACCGTTGGCAAACATCATCAAGTTTCCG
GCGGTTTCTCCTGGCGGTCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MEPSLSITHQLSPHLAKGPLQRRMRGRAMGFLDHLKIVWKIGLIVTVLAITVVGVAALGIQQLSETIDDFSGLSAEQSVN
LAVSRSQRRLETYHAAIYATLTESTAEGNARRLKTGTQSRDEIQGLLDGALKENTSLSADVNAIAAGFKSAFAACDPVLE
AGAKATTAEDNAKVAERAHSACDPVIDKVLEDTQKFSRRNIDRVAKARETIKYEARGSIRLVMMAGGIGVVLGTLIALFI
GVKSLSQPIARLKIAMERLAGNDLAIAVPETGRGDEIGDMAKTVETFKTNGLEVARLKQAQEESARQSAEQRRRDMHDLA
NRFEQAVGEIVQTVSSASTELEASANTLNTTADRAQRLTSVVASASEEASANVHSVASAAEELSSSVNEISRQVQESARM
AGEAVTQARKTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGE
IGQQISGIQTATQESVGAIKEISGTIERLAEIASTIAAAVEEQGAATQEISRNVQQASRGTQDVSTNIVDVQRGASETGS
ASSQVLSAAKTLSTDSERLRGEISRFLSTVRAA

Sequences:

>Translated_593_residues
MEPSLSITHQLSPHLAKGPLQRRMRGRAMGFLDHLKIVWKIGLIVTVLAITVVGVAALGIQQLSETIDDFSGLSAEQSVN
LAVSRSQRRLETYHAAIYATLTESTAEGNARRLKTGTQSRDEIQGLLDGALKENTSLSADVNAIAAGFKSAFAACDPVLE
AGAKATTAEDNAKVAERAHSACDPVIDKVLEDTQKFSRRNIDRVAKARETIKYEARGSIRLVMMAGGIGVVLGTLIALFI
GVKSLSQPIARLKIAMERLAGNDLAIAVPETGRGDEIGDMAKTVETFKTNGLEVARLKQAQEESARQSAEQRRRDMHDLA
NRFEQAVGEIVQTVSSASTELEASANTLNTTADRAQRLTSVVASASEEASANVHSVASAAEELSSSVNEISRQVQESARM
AGEAVTQARKTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGE
IGQQISGIQTATQESVGAIKEISGTIERLAEIASTIAAAVEEQGAATQEISRNVQQASRGTQDVSTNIVDVQRGASETGS
ASSQVLSAAKTLSTDSERLRGEISRFLSTVRAA
>Mature_593_residues
MEPSLSITHQLSPHLAKGPLQRRMRGRAMGFLDHLKIVWKIGLIVTVLAITVVGVAALGIQQLSETIDDFSGLSAEQSVN
LAVSRSQRRLETYHAAIYATLTESTAEGNARRLKTGTQSRDEIQGLLDGALKENTSLSADVNAIAAGFKSAFAACDPVLE
AGAKATTAEDNAKVAERAHSACDPVIDKVLEDTQKFSRRNIDRVAKARETIKYEARGSIRLVMMAGGIGVVLGTLIALFI
GVKSLSQPIARLKIAMERLAGNDLAIAVPETGRGDEIGDMAKTVETFKTNGLEVARLKQAQEESARQSAEQRRRDMHDLA
NRFEQAVGEIVQTVSSASTELEASANTLNTTADRAQRLTSVVASASEEASANVHSVASAAEELSSSVNEISRQVQESARM
AGEAVTQARKTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGE
IGQQISGIQTATQESVGAIKEISGTIERLAEIASTIAAAVEEQGAATQEISRNVQQASRGTQDVSTNIVDVQRGASETGS
ASSQVLSAAKTLSTDSERLRGEISRFLSTVRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=330, Percent_Identity=30.9090909090909, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1787690, Length=367, Percent_Identity=29.700272479564, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788194, Length=195, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=237, Percent_Identity=31.6455696202532, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789453, Length=357, Percent_Identity=28.8515406162465, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62637; Mature: 62637

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSLSITHQLSPHLAKGPLQRRMRGRAMGFLDHLKIVWKIGLIVTVLAITVVGVAALGI
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLSETIDDFSGLSAEQSVNLAVSRSQRRLETYHAAIYATLTESTAEGNARRLKTGTQSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
DEIQGLLDGALKENTSLSADVNAIAAGFKSAFAACDPVLEAGAKATTAEDNAKVAERAHS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ACDPVIDKVLEDTQKFSRRNIDRVAKARETIKYEARGSIRLVMMAGGIGVVLGTLIALFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHH
GVKSLSQPIARLKIAMERLAGNDLAIAVPETGRGDEIGDMAKTVETFKTNGLEVARLKQA
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
QEESARQSAEQRRRDMHDLANRFEQAVGEIVQTVSSASTELEASANTLNTTADRAQRLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VVASASEEASANVHSVASAAEELSSSVNEISRQVQESARMAGEAVTQARKTNDRVSELSK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGE
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGQQISGIQTATQESVGAIKEISGTIERLAEIASTIAAAVEEQGAATQEISRNVQQASRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TQDVSTNIVDVQRGASETGSASSQVLSAAKTLSTDSERLRGEISRFLSTVRAA
CHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPSLSITHQLSPHLAKGPLQRRMRGRAMGFLDHLKIVWKIGLIVTVLAITVVGVAALGI
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLSETIDDFSGLSAEQSVNLAVSRSQRRLETYHAAIYATLTESTAEGNARRLKTGTQSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
DEIQGLLDGALKENTSLSADVNAIAAGFKSAFAACDPVLEAGAKATTAEDNAKVAERAHS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ACDPVIDKVLEDTQKFSRRNIDRVAKARETIKYEARGSIRLVMMAGGIGVVLGTLIALFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHH
GVKSLSQPIARLKIAMERLAGNDLAIAVPETGRGDEIGDMAKTVETFKTNGLEVARLKQA
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
QEESARQSAEQRRRDMHDLANRFEQAVGEIVQTVSSASTELEASANTLNTTADRAQRLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VVASASEEASANVHSVASAAEELSSSVNEISRQVQESARMAGEAVTQARKTNDRVSELSK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGE
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGQQISGIQTATQESVGAIKEISGTIERLAEIASTIAAAVEEQGAATQEISRNVQQASRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TQDVSTNIVDVQRGASETGSASSQVLSAAKTLSTDSERLRGEISRFLSTVRAA
CHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]