Click here to switch to the map view.

The map label for this gene is yisV [H]

Identifier: 146337828

GI number: 146337828

Start: 746654

End: 748102

Strand: Reverse

Name: yisV [H]

Synonym: BRADO0709

Alternate gene names: 146337828

Gene position: 748102-746654 (Counterclockwise)

Preceding gene: 146337830

Following gene: 146337820

Centisome position: 10.03

GC content: 70.95

Gene sequence:

>1449_bases
TTGGGACTCGCGGTCTCAGATCCGCGCCCGGCGGGCGCCAGGACGACGGCGGTGGTCGAGGCCATCAGGCAGCGGCTGAA
GACGCGCGCGCTCGCGCCCGGCCAGCGCCTGCCGTCGATCCGGGCGTTCGCTGCAACGATGGGTGTCGCACCGGCCACTG
TCGTCGAGGCCTACGACCGGCTTGCGGCCGAAGGCCTCATTCGCGCCCGGCGCGGCTCGGGGTTCTATGTCGCCGAGACT
GCCCTGCCGCCGCTCGCGCTCGCCGGGGCCGAGCCGCGCCGGCCGCGCGCGGTCGACCCGTTCTGGGTGTCGCGGCAGTC
GCTCGACGCCACGGCGACGACGCTGACGCCCGGTTGCGGCTGGCTGCCGCCGGACTGGATGCCGCAGGACGCACTCCGCC
GCGCGGTCCGCGCACTGGCGCGCAGTGGCGGTCCTGAGCTCACCCATTACGGCGCCGCGCGCGGATCAATGACGCTGCGC
CGCGTGCTGCAGGGCCGCCTCGGCGGCATCGGGGTCGAAGCCTCGAGCGAGCAGCTCATGCTGACGTCGTCGGGCACCCA
GGCGATCGACCTGATCTGCCGCATGCTGCTGCGGCCCGGCGAGACGGTCGTGGTCGACGATCCCTGCTATTTCAATTTCC
TGGCGCTGCTGCGCGCGCATCAGGCGCGGATCGTCAGCGTGCCGATGACACCGAGCGGCCCGGATGTCGCGCAGTTCGAG
GCGGTGCTCGCGACCGAGCGGCCGCGGCTCTACATCACCAATTCGGGCCTGCACAATCCGACCGGCGCGACCCTGTCGCT
GCAGACGGCGCACCGGCTGCTCAACGCCGCGACCACGCATGATACGATCATCATCGAGGACGACATCTACGGCGACTTCG
AGCCGGAGCCGTCGCCGCGGCTCGCCGCGCTCGACGGGTTGCAGCGCGTGATCCTGATCGGCAGCTTCTCCAAGACGCTG
TCGGCGTCGATCCGCTGCGGCTATATCGCAGGCCGCGCCGACTGGATCGAGCCGCTGATCGACCTGCAGATCGCCACCGG
CTTCGGCGGACCCGGACAGTTCGCGGCAGAGGCGCTGGCGCAGGTTTTGACCGGCGGCAGCTACCGCAAGCATGTCGAGG
AGTTGCGCGCGCGGCTCGCGCGGGTGCGGCCACGCGTTGCCGCACGGCTGCATCGCCTCGGCATGACGCCATGGCTGATG
CCACGCGGCGGCTTTCATCTGTGGTGCAAGCTGCCGGAGGGATGCACGGCCATCGCGGTCGCGGAGGCGGCCCTGGATGA
GGATGTGGTGCTGGCGCCCGGCGACGTGTTCAGCGCGGCGCAATCAGCGGCCGGGATGATGCGCTTCAACGTCGCGCATT
GCGACGATCAACGGGTGATGGCTGCTCTGGAGCGCGCGATCCAGCATGAGGCCGCAACTGTCGCGCGGCCGGTTCAACGC
CAGCGATGA

Upstream 100 bases:

>100_bases
GCCCTCCTTGGACAGCCCTGCTTAGCCGAAGGCGCCTTGCTGCGGCAGCCACGGATCGATACAATTCTGCCAAACTGTAT
TGATCTGTGGGGCAGTACAC

Downstream 100 bases:

>100_bases
TCGGCAAATCTCAGTAGCAGTAGCGCGGATGGACGCGGACATAGGCGCCGTCGCCACGCTGCAGATAGCAGCCGTTGCGA
TAGGCGTAGTAGCCGCCGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MGLAVSDPRPAGARTTAVVEAIRQRLKTRALAPGQRLPSIRAFAATMGVAPATVVEAYDRLAAEGLIRARRGSGFYVAET
ALPPLALAGAEPRRPRAVDPFWVSRQSLDATATTLTPGCGWLPPDWMPQDALRRAVRALARSGGPELTHYGAARGSMTLR
RVLQGRLGGIGVEASSEQLMLTSSGTQAIDLICRMLLRPGETVVVDDPCYFNFLALLRAHQARIVSVPMTPSGPDVAQFE
AVLATERPRLYITNSGLHNPTGATLSLQTAHRLLNAATTHDTIIIEDDIYGDFEPEPSPRLAALDGLQRVILIGSFSKTL
SASIRCGYIAGRADWIEPLIDLQIATGFGGPGQFAAEALAQVLTGGSYRKHVEELRARLARVRPRVAARLHRLGMTPWLM
PRGGFHLWCKLPEGCTAIAVAEAALDEDVVLAPGDVFSAAQSAAGMMRFNVAHCDDQRVMAALERAIQHEAATVARPVQR
QR

Sequences:

>Translated_482_residues
MGLAVSDPRPAGARTTAVVEAIRQRLKTRALAPGQRLPSIRAFAATMGVAPATVVEAYDRLAAEGLIRARRGSGFYVAET
ALPPLALAGAEPRRPRAVDPFWVSRQSLDATATTLTPGCGWLPPDWMPQDALRRAVRALARSGGPELTHYGAARGSMTLR
RVLQGRLGGIGVEASSEQLMLTSSGTQAIDLICRMLLRPGETVVVDDPCYFNFLALLRAHQARIVSVPMTPSGPDVAQFE
AVLATERPRLYITNSGLHNPTGATLSLQTAHRLLNAATTHDTIIIEDDIYGDFEPEPSPRLAALDGLQRVILIGSFSKTL
SASIRCGYIAGRADWIEPLIDLQIATGFGGPGQFAAEALAQVLTGGSYRKHVEELRARLARVRPRVAARLHRLGMTPWLM
PRGGFHLWCKLPEGCTAIAVAEAALDEDVVLAPGDVFSAAQSAAGMMRFNVAHCDDQRVMAALERAIQHEAATVARPVQR
QR
>Mature_481_residues
GLAVSDPRPAGARTTAVVEAIRQRLKTRALAPGQRLPSIRAFAATMGVAPATVVEAYDRLAAEGLIRARRGSGFYVAETA
LPPLALAGAEPRRPRAVDPFWVSRQSLDATATTLTPGCGWLPPDWMPQDALRRAVRALARSGGPELTHYGAARGSMTLRR
VLQGRLGGIGVEASSEQLMLTSSGTQAIDLICRMLLRPGETVVVDDPCYFNFLALLRAHQARIVSVPMTPSGPDVAQFEA
VLATERPRLYITNSGLHNPTGATLSLQTAHRLLNAATTHDTIIIEDDIYGDFEPEPSPRLAALDGLQRVILIGSFSKTLS
ASIRCGYIAGRADWIEPLIDLQIATGFGGPGQFAAEALAQVLTGGSYRKHVEELRARLARVRPRVAARLHRLGMTPWLMP
RGGFHLWCKLPEGCTAIAVAEAALDEDVVLAPGDVFSAAQSAAGMMRFNVAHCDDQRVMAALERAIQHEAATVARPVQRQ
R

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=341, Percent_Identity=26.099706744868, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI33469970, Length=341, Percent_Identity=26.099706744868, Blast_Score=96, Evalue=9e-20,
Organism=Escherichia coli, GI1790797, Length=440, Percent_Identity=26.5909090909091, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1787710, Length=454, Percent_Identity=28.1938325991189, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 51839; Mature: 51708

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAVSDPRPAGARTTAVVEAIRQRLKTRALAPGQRLPSIRAFAATMGVAPATVVEAYDR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
LAAEGLIRARRGSGFYVAETALPPLALAGAEPRRPRAVDPFWVSRQSLDATATTLTPGCG
HHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCHHEEECCCCC
WLPPDWMPQDALRRAVRALARSGGPELTHYGAARGSMTLRRVLQGRLGGIGVEASSEQLM
CCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
LTSSGTQAIDLICRMLLRPGETVVVDDPCYFNFLALLRAHQARIVSVPMTPSGPDVAQFE
EECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH
AVLATERPRLYITNSGLHNPTGATLSLQTAHRLLNAATTHDTIIIEDDIYGDFEPEPSPR
HHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
LAALDGLQRVILIGSFSKTLSASIRCGYIAGRADWIEPLIDLQIATGFGGPGQFAAEALA
HHHHHHHCEEEEEECCHHHHHCCEEEEEEECCHHHHHHHHHEEEECCCCCCHHHHHHHHH
QVLTGGSYRKHVEELRARLARVRPRVAARLHRLGMTPWLMPRGGFHLWCKLPEGCTAIAV
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHH
AEAALDEDVVLAPGDVFSAAQSAAGMMRFNVAHCDDQRVMAALERAIQHEAATVARPVQR
HHHHCCCCEEECCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
QR
CC
>Mature Secondary Structure 
GLAVSDPRPAGARTTAVVEAIRQRLKTRALAPGQRLPSIRAFAATMGVAPATVVEAYDR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
LAAEGLIRARRGSGFYVAETALPPLALAGAEPRRPRAVDPFWVSRQSLDATATTLTPGCG
HHHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCHHEEECCCCC
WLPPDWMPQDALRRAVRALARSGGPELTHYGAARGSMTLRRVLQGRLGGIGVEASSEQLM
CCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE
LTSSGTQAIDLICRMLLRPGETVVVDDPCYFNFLALLRAHQARIVSVPMTPSGPDVAQFE
EECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHH
AVLATERPRLYITNSGLHNPTGATLSLQTAHRLLNAATTHDTIIIEDDIYGDFEPEPSPR
HHHHCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
LAALDGLQRVILIGSFSKTLSASIRCGYIAGRADWIEPLIDLQIATGFGGPGQFAAEALA
HHHHHHHCEEEEEECCHHHHHCCEEEEEEECCHHHHHHHHHEEEECCCCCCHHHHHHHHH
QVLTGGSYRKHVEELRARLARVRPRVAARLHRLGMTPWLMPRGGFHLWCKLPEGCTAIAV
HHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHH
AEAALDEDVVLAPGDVFSAAQSAAGMMRFNVAHCDDQRVMAALERAIQHEAATVARPVQR
HHHHCCCCEEECCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
QR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]