Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337826
Identifier: 146337826
GI number: 146337826
Start: 744564
End: 746210
Strand: Direct
Name: 146337826
Synonym: BRADO0707
Alternate gene names: NA
Gene position: 744564-746210 (Clockwise)
Preceding gene: 146337825
Following gene: 146337827
Centisome position: 9.99
GC content: 67.03
Gene sequence:
>1647_bases ATGCTGTTGCGCAGGTTCACCCCTTTGCTGCCGTCGTTCAGTCTCAACGACAAGATCAGCGCGGCCGCTGCCGCCTTCGC CGTCCTCGTGATGCTCTCGACCTTCGGCGCGGTGTCGGCGCTCCGGGAGCAGCGCCTGTTCTACGACCGGCTCGAAACTC TTTCCGAGGCCTCCCGCAATATCGAGCGCATCAATGCGCTGATCTATGCCGTGGTGATGGAGTCTCGGGGCATCTACATG TCGCCGGATCGCAACGTCGCCCGGCGCTACGCCGATTCGCAGCTCGTCAAGCTCGCGCAGCTGAGCAAGGTCGTCGAGGA ATGGGAAGCCCGCACTGGCGACGAGGATGCGGCCCTGTTCGCCCCGTTCAGGAAGCGGATCGATCAGTTCGTCGCATTCC GCACCGAGATGGCGCGTCGCACGATCGCGATCGGCTCGTCGGCGGCGCGCGAGCTCGGCGACAATGACGAGAACCGCGCG GTGCGGACCGCGCTCAACGAAGATCTCGAGGGTCTGTCGCGGCTCTATGCCGACCGCACCCGCGAGCTCGGCGATGTCGT CGACGAGCGAGGCCTCGCCTCGTTCTTTATCGGCGGGCTCGGCCTGCTCATCGTCACGCTGATCGCGGCCGCCGCGCTGG CACTGCGCCGCGGCGTTCTGATGCCGCTGCTCGACATCGCCCGGGTCACGGATCGCATCGCCGCCGGCCGCATCAAGCTG AAGATCCCGCATGCGCATCGCCAGGACGAGATCGGGCACGTTGCCCATGCCGTCGAGACCTATCAGAACAACGCATTCCG CCTGCAGGAGCTCGAGCAGCACGAGGTCGAGATCGAGCGGCAGTACACCGACATCCTGCGTGACCATGAGCGGCTGGAGC AGGGCGCGATCAGCAGCCAGCAGCGGCTGGATGCGGCCGTCGCCAACATGCCGCAGGGCCTGATCATGCTCGACAGCTTC GGCTATGTGCTGATGGTCAACGACCAGTACCGCAAGCTCTACGGCGTTCCTGCCTCGATCGCAAAGCCCGGCGCGCATAT GCGTGAGATCCTGGCGCATCGCGCCAAGCTCGGCCTGATGCGCGAAAAGCCGTCCGAGTTCCTCGCCGCGCTTCGCGAGC GCATGAAGGAGCGCAGGGCGGAGATCTTCGAGGTCGAGCTCACCGACGGCCGCATCATGCGCATCTCCGAGCGCCCGATG GACGGCGGTGGCTGGGTCGCGACCCACGAGGACTTCACGGCCCAGCGGCGCAACGAGCGGGTGCTGGCGCGGGCGGAACA TTTCCTCGCGGCGCTGCTGGAGAACATCCCGCAGGCCGTCGTTGCAAAGGACGCGCAGTCGCTCCGCTACGTGTTCGTCA ACCGCGCGACCGAGGCGCTGTTCGGCCTGCCGCGGTCGGAGATCATCGGCCGCGCCGCGCGCGAGCTGTTTCCGGCGCCG ACGGGCGCGCTGCTCGAAAGCTTCGATCGCGACCATCTCGACGAGGCGGCCGACCAGACACCGAAGGCGCACAGCATCGA GACGCCCGGCAATGGCAGGCGCGATATCGTGGTCCGCCGCCTGCCGGTGTCGGTCGGCGAGGGCGAGCCGAAATATCTGC TGAGCATCGTCGAGGACCGCACCAGGGATCAGCGCGCTGCGGCGTGA
Upstream 100 bases:
>100_bases TGGGTTAATTCTTCGTTGCGGCTTGGTGATGTTATCTGAACGTGTTGTTTACGGATTTTGCGTCTGATGGTTGTCCCAAC GCCGGGAGCCAGCCATGCAG
Downstream 100 bases:
>100_bases TCGCGGCATGGACTACGCGATTCCGGCGCCTTGACCGCGCCTTGATCTGCATCAAGAAGGGCTCATCCGGGCGGACTAGC GTGCCCGGAACGGAGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein; Multi-Sensor Hybrid Histidine Kinase; GGDEF Domain-Containing Protein; PAS/PAC Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Hybrid Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Two-Component Sensor Histidine Kinase Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase; Two-Component Sensor Histidine Kinase; PAS Fold Family; Two-Component Sensor; GAF Sensor Protein; Signaling Protein; Methyl Accepting Chemotaxis Protein; Signal Transduction Histidine Kinase; PleD-Like-Protein; PAS-Family Sensor Histidine Kinase
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MLLRRFTPLLPSFSLNDKISAAAAAFAVLVMLSTFGAVSALREQRLFYDRLETLSEASRNIERINALIYAVVMESRGIYM SPDRNVARRYADSQLVKLAQLSKVVEEWEARTGDEDAALFAPFRKRIDQFVAFRTEMARRTIAIGSSAARELGDNDENRA VRTALNEDLEGLSRLYADRTRELGDVVDERGLASFFIGGLGLLIVTLIAAAALALRRGVLMPLLDIARVTDRIAAGRIKL KIPHAHRQDEIGHVAHAVETYQNNAFRLQELEQHEVEIERQYTDILRDHERLEQGAISSQQRLDAAVANMPQGLIMLDSF GYVLMVNDQYRKLYGVPASIAKPGAHMREILAHRAKLGLMREKPSEFLAALRERMKERRAEIFEVELTDGRIMRISERPM DGGGWVATHEDFTAQRRNERVLARAEHFLAALLENIPQAVVAKDAQSLRYVFVNRATEALFGLPRSEIIGRAARELFPAP TGALLESFDRDHLDEAADQTPKAHSIETPGNGRRDIVVRRLPVSVGEGEPKYLLSIVEDRTRDQRAAA
Sequences:
>Translated_548_residues MLLRRFTPLLPSFSLNDKISAAAAAFAVLVMLSTFGAVSALREQRLFYDRLETLSEASRNIERINALIYAVVMESRGIYM SPDRNVARRYADSQLVKLAQLSKVVEEWEARTGDEDAALFAPFRKRIDQFVAFRTEMARRTIAIGSSAARELGDNDENRA VRTALNEDLEGLSRLYADRTRELGDVVDERGLASFFIGGLGLLIVTLIAAAALALRRGVLMPLLDIARVTDRIAAGRIKL KIPHAHRQDEIGHVAHAVETYQNNAFRLQELEQHEVEIERQYTDILRDHERLEQGAISSQQRLDAAVANMPQGLIMLDSF GYVLMVNDQYRKLYGVPASIAKPGAHMREILAHRAKLGLMREKPSEFLAALRERMKERRAEIFEVELTDGRIMRISERPM DGGGWVATHEDFTAQRRNERVLARAEHFLAALLENIPQAVVAKDAQSLRYVFVNRATEALFGLPRSEIIGRAARELFPAP TGALLESFDRDHLDEAADQTPKAHSIETPGNGRRDIVVRRLPVSVGEGEPKYLLSIVEDRTRDQRAAA >Mature_548_residues MLLRRFTPLLPSFSLNDKISAAAAAFAVLVMLSTFGAVSALREQRLFYDRLETLSEASRNIERINALIYAVVMESRGIYM SPDRNVARRYADSQLVKLAQLSKVVEEWEARTGDEDAALFAPFRKRIDQFVAFRTEMARRTIAIGSSAARELGDNDENRA VRTALNEDLEGLSRLYADRTRELGDVVDERGLASFFIGGLGLLIVTLIAAAALALRRGVLMPLLDIARVTDRIAAGRIKL KIPHAHRQDEIGHVAHAVETYQNNAFRLQELEQHEVEIERQYTDILRDHERLEQGAISSQQRLDAAVANMPQGLIMLDSF GYVLMVNDQYRKLYGVPASIAKPGAHMREILAHRAKLGLMREKPSEFLAALRERMKERRAEIFEVELTDGRIMRISERPM DGGGWVATHEDFTAQRRNERVLARAEHFLAALLENIPQAVVAKDAQSLRYVFVNRATEALFGLPRSEIIGRAARELFPAP TGALLESFDRDHLDEAADQTPKAHSIETPGNGRRDIVVRRLPVSVGEGEPKYLLSIVEDRTRDQRAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61552; Mature: 61552
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS50885 HAMP ; PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRRFTPLLPSFSLNDKISAAAAAFAVLVMLSTFGAVSALREQRLFYDRLETLSEASRN CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERINALIYAVVMESRGIYMSPDRNVARRYADSQLVKLAQLSKVVEEWEARTGDEDAALF HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH APFRKRIDQFVAFRTEMARRTIAIGSSAARELGDNDENRAVRTALNEDLEGLSRLYADRT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RELGDVVDERGLASFFIGGLGLLIVTLIAAAALALRRGVLMPLLDIARVTDRIAAGRIKL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE KIPHAHRQDEIGHVAHAVETYQNNAFRLQELEQHEVEIERQYTDILRDHERLEQGAISSQ ECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QRLDAAVANMPQGLIMLDSFGYVLMVNDQYRKLYGVPASIAKPGAHMREILAHRAKLGLM HHHHHHHHHCCCCEEEEECCCEEEEECHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH REKPSEFLAALRERMKERRAEIFEVELTDGRIMRISERPMDGGGWVATHEDFTAQRRNER HCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCEEEECCHHHHHHHHHH VLARAEHFLAALLENIPQAVVAKDAQSLRYVFVNRATEALFGLPRSEIIGRAARELFPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC TGALLESFDRDHLDEAADQTPKAHSIETPGNGRRDIVVRRLPVSVGEGEPKYLLSIVEDR CHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH TRDQRAAA HHHHHCCC >Mature Secondary Structure MLLRRFTPLLPSFSLNDKISAAAAAFAVLVMLSTFGAVSALREQRLFYDRLETLSEASRN CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERINALIYAVVMESRGIYMSPDRNVARRYADSQLVKLAQLSKVVEEWEARTGDEDAALF HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH APFRKRIDQFVAFRTEMARRTIAIGSSAARELGDNDENRAVRTALNEDLEGLSRLYADRT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RELGDVVDERGLASFFIGGLGLLIVTLIAAAALALRRGVLMPLLDIARVTDRIAAGRIKL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE KIPHAHRQDEIGHVAHAVETYQNNAFRLQELEQHEVEIERQYTDILRDHERLEQGAISSQ ECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QRLDAAVANMPQGLIMLDSFGYVLMVNDQYRKLYGVPASIAKPGAHMREILAHRAKLGLM HHHHHHHHHCCCCEEEEECCCEEEEECHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHH REKPSEFLAALRERMKERRAEIFEVELTDGRIMRISERPMDGGGWVATHEDFTAQRRNER HCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCEEEECCHHHHHHHHHH VLARAEHFLAALLENIPQAVVAKDAQSLRYVFVNRATEALFGLPRSEIIGRAARELFPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC TGALLESFDRDHLDEAADQTPKAHSIETPGNGRRDIVVRRLPVSVGEGEPKYLLSIVEDR CHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH TRDQRAAA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA