| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is proW [C]
Identifier: 146337816
GI number: 146337816
Start: 731646
End: 733379
Strand: Reverse
Name: proW [C]
Synonym: BRADO0695
Alternate gene names: 146337816
Gene position: 733379-731646 (Counterclockwise)
Preceding gene: 146337817
Following gene: 146337815
Centisome position: 9.84
GC content: 66.09
Gene sequence:
>1734_bases ATGCTGCTTCAGGACCTCCGGACGACCGTGCTGCGCGAGGCCGTGCGCCCCAATATCTGGGACGTGGTCGCACTGATCAT CGTGGTCGGCGCGATGGTGCTGATTGTCTATGGCGGCGAGCAGACCACGCTGCCGCTGTCGGCGCTCGACACGGCGCCGG TGTCGCTCGATCCGTCCAACCTGCCGCTCTACGCGCTGCGCACCACGTTGCGCATGCTTCTCGCCATCATCTGCTCGCTC GTCTTCACCTTCGTTTACGCCGCGCTGGCGGCCAAGAGCCGGCGCGCCGAGATCGTGCTGATCCCGCTGCTCGACATCCT GCAATCGGTGCCGATCCTCGGCTTCCTCACCTTCACGGTGGTGTTCTTCATGAACCTGTTTCCGGGCAAGGTGCTCGGCG CCGAGCTCGCCTGCGTGTTCGCGATCTTCACCAGCCAGGCCTGGAACATGACCTTCAGCATGTACCAGTCGATGCGCAAC GTACCGAAGGATCTCGAGGAGGCGACGCGCAGCTTCCATCTCTCCGGCTGGCAGCGCTTCTGGCGGCTCGACGTGCCCTA TGCGATGCCCGGCCTGATCTGGAATGCGATGATGTCGATGTCCGGCGGCTGGTTCTTCGTCGTGGCGTCGGAGGCGATCA CCGTCGGCAACACCACCGTCACCTTGCCCGGCATCGGCTCCTATGTCGCGCTGGCCATCCAGCAGAAGGATCTCGCCGCG ATCGGCGCGGCACTGCTGACGATGCTGCTGGTGATCACCGCCTATGATCAGCTGCTATTCCGGCCGATCGTCGCCTGGGC CGACAAATTCCGCTTCGAGCAGACCGCGTCTGGCACTCCGCCAAGCTCGTGGATGCTCGACCTGTTCCGACGCACCCGCG CGCTGCGCTCGCTGTCGATCCCGTTCGCCGCGATCAACCGCACCTTCTCCAACTTGCGCCTCAACTGGCCGAAAGCCTGG AGCGGCCCGGTGCGCCATGCGCCGCCGTCGCAGCTGGTCGATGGTCTCTGGCTCGCCGCGGTCGTCGTCGGCTGTGCCTA CGCTGGCTGGAAGACATACCTCTATCTCTCAACGACACTCGCGCCTTCGGATGTCTTCAGCGCGATCGGCTATGGCCTGA TCACGCTGATCCGCGTCGCCGTGCTGATCGCGCTGGCCTCGCTGATCTGGGTGCCGGTCGGCGTCTGGATCGGGCTGCGG CCCAAGCTCGCCGAGCGCATGCAGCCGCTGGCGCAATTCCTCGCCGCCTTCCCGGCCAACCTCGCCTTCCCCGTGTTCGT CGTGCTGATCGTGCGCTACGGCCTCAATGCCGATGTCTGGCTGAGCCCGCTGATGATCCTGGGCACGCAGTGGTACATCC TGTTCAACGTCATCGCCGGCGCCAGCGCCTTCCCGAGCGATCTCCGCGAAGCGGCCGCAAGCCTGCACCTCACCGGCTGG CGCTGGTGGTTCAAGGTCGTGCTGCCCGGCGTCTTCCCCTATTACATCACCGGCGCCATCACCGCCTCCGGCGGCTCCTG GAATGCGGCGATCGTCGCGGAGGTGGCGAGCTGGGGCGACACGCATCTCACCGCATCAGGCCTCGGCGCCTACATCGCTG CCGCCACGGAGCGCGGCGACTTCCCGCGCGTCGTGCTGGGGATCGCCGTGATGTGCATTCTCGTCACTCTGTTCAACCGG CTGCTGTGGCGGCCGCTCTATGCCTTCGGCGAACGCCGGCTGCGGCTCGGCTGA
Upstream 100 bases:
>100_bases TGCGGATTCGGCCGGCGGCCCTGCCGGCACGACCAGCCCCAGGCCATGACGAGGACCCGTCCGCAGCCAGACGCTGCGGC CGACGAGACGAGACACGCGA
Downstream 100 bases:
>100_bases CCGGGAGAGATCATCATGCGCGACCAGGTCAAGGACACTTCGCTGATCGAGATCAAGGGCGTCAGCCGGATGTTTCCCAA GGGCAGCGGCGAGGATCTCG
Product: ABC transporter permease
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSNLPLYALRTTLRMLLAIICSL VFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTVVFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRN VPKDLEEATRSFHLSGWQRFWRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALRSLSIPFAAINRTFSNLRLNWPKAW SGPVRHAPPSQLVDGLWLAAVVVGCAYAGWKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLR PKLAERMQPLAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLREAAASLHLTGW RWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLGAYIAAATERGDFPRVVLGIAVMCILVTLFNR LLWRPLYAFGERRLRLG
Sequences:
>Translated_577_residues MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSNLPLYALRTTLRMLLAIICSL VFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTVVFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRN VPKDLEEATRSFHLSGWQRFWRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALRSLSIPFAAINRTFSNLRLNWPKAW SGPVRHAPPSQLVDGLWLAAVVVGCAYAGWKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLR PKLAERMQPLAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLREAAASLHLTGW RWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLGAYIAAATERGDFPRVVLGIAVMCILVTLFNR LLWRPLYAFGERRLRLG >Mature_577_residues MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSNLPLYALRTTLRMLLAIICSL VFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTVVFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRN VPKDLEEATRSFHLSGWQRFWRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALRSLSIPFAAINRTFSNLRLNWPKAW SGPVRHAPPSQLVDGLWLAAVVVGCAYAGWKTYLYLSTTLAPSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLR PKLAERMQPLAQFLAAFPANLAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLREAAASLHLTGW RWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLGAYIAAATERGDFPRVVLGIAVMCILVTLFNR LLWRPLYAFGERRLRLG
Specific function: Involved In A Multicomponent Binding-Protein-Dependent Transport System For Glycine Betaine/L-Proline. [C]
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63524; Mature: 63524
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCCCCCCC LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCHHHHHHHHH VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA HCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCCCHHHHHHHHHHHHHH IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALRSLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYAGWKTYLYLSTTL CHHHHHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECC APSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQPLAQFLAAFPAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC LAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLREAAASLHLTGW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH RWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLGAYIAAATERGD HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCC FPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MLLQDLRTTVLREAVRPNIWDVVALIIVVGAMVLIVYGGEQTTLPLSALDTAPVSLDPSN CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCCCCCCC LPLYALRTTLRMLLAIICSLVFTFVYAALAAKSRRAEIVLIPLLDILQSVPILGFLTFTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCHHHHHHHHH VFFMNLFPGKVLGAELACVFAIFTSQAWNMTFSMYQSMRNVPKDLEEATRSFHLSGWQRF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH WRLDVPYAMPGLIWNAMMSMSGGWFFVVASEAITVGNTTVTLPGIGSYVALAIQQKDLAA HCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCCCHHHHHHHHHHHHHH IGAALLTMLLVITAYDQLLFRPIVAWADKFRFEQTASGTPPSSWMLDLFRRTRALRSLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC PFAAINRTFSNLRLNWPKAWSGPVRHAPPSQLVDGLWLAAVVVGCAYAGWKTYLYLSTTL CHHHHHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECC APSDVFSAIGYGLITLIRVAVLIALASLIWVPVGVWIGLRPKLAERMQPLAQFLAAFPAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC LAFPVFVVLIVRYGLNADVWLSPLMILGTQWYILFNVIAGASAFPSDLREAAASLHLTGW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH RWWFKVVLPGVFPYYITGAITASGGSWNAAIVAEVASWGDTHLTASGLGAYIAAATERGD HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCC FPRVVLGIAVMCILVTLFNRLLWRPLYAFGERRLRLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA