| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is nudG [H]
Identifier: 146337716
GI number: 146337716
Start: 599422
End: 599832
Strand: Reverse
Name: nudG [H]
Synonym: BRADO0585
Alternate gene names: 146337716
Gene position: 599832-599422 (Counterclockwise)
Preceding gene: 146337719
Following gene: 146337714
Centisome position: 8.04
GC content: 65.45
Gene sequence:
>411_bases ATGACCGATTTCAAACTCACGCTCGTCGTCGCCTGCGCTCTGGTCGACACCGACAATCGCGTGCTGCTGGCGCAGCGGCC GCCCGGCAAGACGCTCGCCGGCTTGTGGGAATTTCCTGGCGGCAAGCTCGAACCGGGCGAGCGTCCGGAGGCCAGCCTGA TCCGCGAGCTCGACGAGGAGCTCGGCATCACCGTGCGCGAGACCTGCCTGGCGCCGCTGACCTTCGCCAGTCACGCCTAT GAGACGTTCCACCTGCTGATGCCGCTTTACATCTGCCGGCGCTGGGAAGGCGTGGTGACCGCGCGCGAGGGCCAGAAATT GGCCTGGGTGCGACCGAACAAGCTGCGCGACTACCCGATGCCGCCGGCGGACATTCCGCTGCTGCCGCATTTGATCGATC TATTGATGTGA
Upstream 100 bases:
>100_bases ATCGGGTTCCATAAGGTTCCATTGAGTTCCACCATGTTTGCGGCGCGGGCACGAATGGGTTAACGCTGAGTAAACCGCCC TTCCCGCCCGACTGCATCAG
Downstream 100 bases:
>100_bases GGCCGGGGGCGTCACGCCCCGCCTCGTCATGCGCGGGCTTGACCCGCCTGCGGGGCCGTAGCCCCTTCGGCGCGGCGAAG GCCCGCGCATCCATCCTCTT
Product: putative mutator protein mutT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTDFKLTLVVACALVDTDNRVLLAQRPPGKTLAGLWEFPGGKLEPGERPEASLIRELDEELGITVRETCLAPLTFASHAY ETFHLLMPLYICRRWEGVVTAREGQKLAWVRPNKLRDYPMPPADIPLLPHLIDLLM
Sequences:
>Translated_136_residues MTDFKLTLVVACALVDTDNRVLLAQRPPGKTLAGLWEFPGGKLEPGERPEASLIRELDEELGITVRETCLAPLTFASHAY ETFHLLMPLYICRRWEGVVTAREGQKLAWVRPNKLRDYPMPPADIPLLPHLIDLLM >Mature_135_residues TDFKLTLVVACALVDTDNRVLLAQRPPGKTLAGLWEFPGGKLEPGERPEASLIRELDEELGITVRETCLAPLTFASHAYE TFHLLMPLYICRRWEGVVTAREGQKLAWVRPNKLRDYPMPPADIPLLPHLIDLLM
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=135, Percent_Identity=42.962962962963, Blast_Score=93, Evalue=7e-21, Organism=Escherichia coli, GI1786288, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 15360; Mature: 15229
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFKLTLVVACALVDTDNRVLLAQRPPGKTLAGLWEFPGGKLEPGERPEASLIRELDEE CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LGITVRETCLAPLTFASHAYETFHLLMPLYICRRWEGVVTAREGQKLAWVRPNKLRDYPM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCC PPADIPLLPHLIDLLM CCCCCCHHHHHHHHHC >Mature Secondary Structure TDFKLTLVVACALVDTDNRVLLAQRPPGKTLAGLWEFPGGKLEPGERPEASLIRELDEE CCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LGITVRETCLAPLTFASHAYETFHLLMPLYICRRWEGVVTAREGQKLAWVRPNKLRDYPM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCC PPADIPLLPHLIDLLM CCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]