| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ubiG
Identifier: 146337707
GI number: 146337707
Start: 592981
End: 593742
Strand: Direct
Name: ubiG
Synonym: BRADO0576
Alternate gene names: 146337707
Gene position: 592981-593742 (Clockwise)
Preceding gene: 146337706
Following gene: 146337709
Centisome position: 7.95
GC content: 64.7
Gene sequence:
>762_bases ATGACAATGTCTCAGGATTCCCGCAGTACGCCCGGCTCGACGGTCGATCCGGCCGAGATTGCGAAATTCTCCAAACTGTC GGAGACCTGGTGGGACCCCAAGGGCAAGATGGCGCCCTTGCACAAGATCAACCCGCTGCGCCTGACCTATATCCGCGACG CCGCCTGCCGGAAGTTCGAGCGCAACGCCAAGAGCCTCAACTGCCTGTCGGGTCTGCGCATGCTCGACATCGGCTGCGGC GCCGGCCTGTTGTGCGAGCCGTTCACGCGCCTCGGCGCGCAGGTCGTCGGCGTCGATCCCTCCGCGAGCAACATCGCCGC CGCCAAGCTGCACGCCGAGAAGGGCCATATGTCGATCGACTACCGCTGCACGACCATCGAAGAGATGGATCCGCGCGAGC GCTTCGACATCGTGCTGGCGATGGAGGTCGTCGAGCACGTCACCGATGTCGGCGCCTTCCTCGGCCGCTGCGCCGCCGTG CTGAAGCCGGGCGGCCTGATGGTGGTCTCGACCCTGAACCGCAACTGGAAGAGCTTCGCGCTCGCCATCGTCGGCGCCGA ATATGTCCTGCGCTGGCTGCCGCGCGGGACGCATGAATGGAGCAAGTTCGTCACTCCCGACGAGCTGACCAAATATCTCC TCGACAACCGCCTCGTCATCACCGAGCAGAGCGGCGTCGTCTACAGCCCGTTCGCCGACCGCTGGAGCCTGTCCAGCGAC ATGGACGTGAACTACATGGTGGTCGCCGAGCAGATGGTCTGA
Upstream 100 bases:
>100_bases GAAACCATTTCGACCATCGCGGAGCCGCTGGCGTTTCGCAACGCCATCACGGCGCGATAGCCCGCCCGGACGGTCCAGCT TCGATCATGAGTATGCAGCG
Downstream 100 bases:
>100_bases TCAGCTCTGACTTGGATCGTCTGCCGCTCCATATACGGTGTCGTCCCTGCGAACGCAGGGACCCATAACCACAGGGAGGG GTTAGGGGCACGCTAGGAGA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTMSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGLRMLDIGCG AGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAEKGHMSIDYRCTTIEEMDPRERFDIVLAMEVVEHVTDVGAFLGRCAAV LKPGGLMVVSTLNRNWKSFALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSD MDVNYMVVAEQMV
Sequences:
>Translated_253_residues MTMSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGLRMLDIGCG AGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAEKGHMSIDYRCTTIEEMDPRERFDIVLAMEVVEHVTDVGAFLGRCAAV LKPGGLMVVSTLNRNWKSFALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSD MDVNYMVVAEQMV >Mature_252_residues TMSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGLRMLDIGCGA GLLCEPFTRLGAQVVGVDPSASNIAAAKLHAEKGHMSIDYRCTTIEEMDPRERFDIVLAMEVVEHVTDVGAFLGRCAAVL KPGGLMVVSTLNRNWKSFALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSDM DVNYMVVAEQMV
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=246, Percent_Identity=41.869918699187, Blast_Score=201, Evalue=4e-52, Organism=Escherichia coli, GI1788564, Length=243, Percent_Identity=40.7407407407407, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI115533050, Length=246, Percent_Identity=32.9268292682927, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=275, Percent_Identity=29.4545454545455, Blast_Score=116, Evalue=3e-27, Organism=Drosophila melanogaster, GI281365311, Length=240, Percent_Identity=31.25, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24585589, Length=241, Percent_Identity=30.7053941908714, Blast_Score=125, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_BRASO (A4YKT6)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001202755.1 - ProteinModelPortal: A4YKT6 - STRING: A4YKT6 - GeneID: 5115336 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO0576 - eggNOG: COG2227 - HOGENOM: HBG738842 - OMA: KFITPDE - ProtClustDB: PRK05134 - BioCyc: BSP376:BRADO0576-MONOMER - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 28147; Mature: 28016
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHH RNAKSLNCLSGLRMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAEKGHMSID HCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCEEEE YRCTTIEEMDPRERFDIVLAMEVVEHVTDVGAFLGRCAAVLKPGGLMVVSTLNRNWKSFA EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH LAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSD HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCC MDVNYMVVAEQMV CCCEEEEEEEECC >Mature Secondary Structure TMSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHH RNAKSLNCLSGLRMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAEKGHMSID HCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCEEEE YRCTTIEEMDPRERFDIVLAMEVVEHVTDVGAFLGRCAAVLKPGGLMVVSTLNRNWKSFA EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH LAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSSD HHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCC MDVNYMVVAEQMV CCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA