Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337606
Identifier: 146337606
GI number: 146337606
Start: 475458
End: 476627
Strand: Direct
Name: 146337606
Synonym: BRADO0467
Alternate gene names: NA
Gene position: 475458-476627 (Clockwise)
Preceding gene: 146337605
Following gene: 146337607
Centisome position: 6.38
GC content: 61.71
Gene sequence:
>1170_bases ATGCTGCAAGAGCAAGTAAGCCGCGCCTTCTCCGTGGTGATGAACGACGAGCCTCCGTTTCCGAGCGGACCGGAGGATTA CGGCTATTCCGTCGCGCCCGCTCCAGCCCCCGCAGAGCCTATCGCTCCGTTCGCGCCGATTACACCGGCTGCGTGGCGCG GTATCGAGCCGACACCGCAACGGTGGCTTGCAGAAGGTCGAATTCCTCTGGGAGATCTCACCATCCTGGCAGGCAACGGA GGCTCTGGCAAAACCGAGATTGCCGCGCAATTGCTGGTTTCTGTTGCCGCAGGGCTTGGCGACTGGCTTGGCTGCGTCGC CGAGACGGGGCCGGCGCTCTTCCTTTCGTGCGAGGAGCCGGAAGACAACGTTCGGGACCGCGTCGAACGTATCGCCAAAC ACCGCAATATTGATCCTCACGGCATCGACAGTTTGCATCTCGTGTTTCCCGACCTTGATCAGACGTGGCTTTGCAACGTC GACAAGAGCGGGAAAGTCCAGCGAACGCATTTGCTGCAGCAGCTTGAGTCCTGGATTGTCCAGAACAAGCCGGCGCTCGT TGCCATAGACAGCGTGGCGGCGGTTTTCGACGGCGACGCAATCCAGCGGCGGCAAGTTCGAGCTTTCCTAGCGATGCTGC GCAAGCTGGCGCGCGAACAGGAAACCGCGATCCTGTTGCTTGATCACCCGAGCGTGCGGGGAATGGCGGACGGCAGTGGT ACGGCAAACTCCGTCGACTGGCGGAATTCGGTTCGGAGCATGTTGCACCTTTCGGACCCTGATAAGGACGATCCCGACGC ACGGTATCTGGAAGTGAAGAAAAGTAATCGCGGTCGCACGGGAGAGAAGACACGCATCCAATGGGCTGGACTAACATTTA GCACCGCCTTGTCGGCCGGGTCGCCTCGTCAGGCGGCAGCTGAACGGGAGGTTGACGAGCTTTTCTTGCGCCTCCTCGAC AAGCGCAACGCTCAGGGGCGCCGCGTTCATGCGAGCAACGCGAAGGGCAACGCCCCATCGGAATTCGCCCAAGACCCCGA AGCGGCAGGCGTCACAGCGCACGCCTTCCGCTCCTCAATGGAGCGACTGCTTACTGCTGGCACCATCAGGGCCGTTGAGA CCGGACCGGCCAGCAAGCGCCGGCAGCATCTGGAAAGGGACGGGCGATGA
Upstream 100 bases:
>100_bases TTTGGTACACGGTGCACAACGAAGATGAAGCGACGCTGAGACAGTGGCTGTTGGATCATCCGGCGGATGCACCGTACCTC CGAAAGCTTTGGGAGGCTCG
Downstream 100 bases:
>100_bases CCTTCCAACCCCCCTACCAACCGGTTTTTTCACCTTCCAACCCCCATGCCGACGCCACTACCAACCGCGTTCCAAAGCCT TCCAACCCCCCTACCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: RecA-Family ATPase; ATPase
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MLQEQVSRAFSVVMNDEPPFPSGPEDYGYSVAPAPAPAEPIAPFAPITPAAWRGIEPTPQRWLAEGRIPLGDLTILAGNG GSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEPEDNVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNV DKSGKVQRTHLLQQLESWIVQNKPALVAIDSVAAVFDGDAIQRRQVRAFLAMLRKLAREQETAILLLDHPSVRGMADGSG TANSVDWRNSVRSMLHLSDPDKDDPDARYLEVKKSNRGRTGEKTRIQWAGLTFSTALSAGSPRQAAAEREVDELFLRLLD KRNAQGRRVHASNAKGNAPSEFAQDPEAAGVTAHAFRSSMERLLTAGTIRAVETGPASKRRQHLERDGR
Sequences:
>Translated_389_residues MLQEQVSRAFSVVMNDEPPFPSGPEDYGYSVAPAPAPAEPIAPFAPITPAAWRGIEPTPQRWLAEGRIPLGDLTILAGNG GSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEPEDNVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNV DKSGKVQRTHLLQQLESWIVQNKPALVAIDSVAAVFDGDAIQRRQVRAFLAMLRKLAREQETAILLLDHPSVRGMADGSG TANSVDWRNSVRSMLHLSDPDKDDPDARYLEVKKSNRGRTGEKTRIQWAGLTFSTALSAGSPRQAAAEREVDELFLRLLD KRNAQGRRVHASNAKGNAPSEFAQDPEAAGVTAHAFRSSMERLLTAGTIRAVETGPASKRRQHLERDGR >Mature_389_residues MLQEQVSRAFSVVMNDEPPFPSGPEDYGYSVAPAPAPAEPIAPFAPITPAAWRGIEPTPQRWLAEGRIPLGDLTILAGNG GSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEPEDNVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNV DKSGKVQRTHLLQQLESWIVQNKPALVAIDSVAAVFDGDAIQRRQVRAFLAMLRKLAREQETAILLLDHPSVRGMADGSG TANSVDWRNSVRSMLHLSDPDKDDPDARYLEVKKSNRGRTGEKTRIQWAGLTFSTALSAGSPRQAAAEREVDELFLRLLD KRNAQGRRVHASNAKGNAPSEFAQDPEAAGVTAHAFRSSMERLLTAGTIRAVETGPASKRRQHLERDGR
Specific function: Unknown
COG id: COG3598
COG function: function code L; RecA-family ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42442; Mature: 42442
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQEQVSRAFSVVMNDEPPFPSGPEDYGYSVAPAPAPAEPIAPFAPITPAAWRGIEPTPQ CCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHH RWLAEGRIPLGDLTILAGNGGSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEP HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC EDNVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNVDKSGKVQRTHLLQQLESWIV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH QNKPALVAIDSVAAVFDGDAIQRRQVRAFLAMLRKLAREQETAILLLDHPSVRGMADGSG CCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC TANSVDWRNSVRSMLHLSDPDKDDPDARYLEVKKSNRGRTGEKTRIQWAGLTFSTALSAG CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCC SPRQAAAEREVDELFLRLLDKRNAQGRRVHASNAKGNAPSEFAQDPEAAGVTAHAFRSSM CCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHH ERLLTAGTIRAVETGPASKRRQHLERDGR HHHHHHHHHEEECCCCCHHHHHHHHHCCC >Mature Secondary Structure MLQEQVSRAFSVVMNDEPPFPSGPEDYGYSVAPAPAPAEPIAPFAPITPAAWRGIEPTPQ CCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHH RWLAEGRIPLGDLTILAGNGGSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEP HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC EDNVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNVDKSGKVQRTHLLQQLESWIV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHH QNKPALVAIDSVAAVFDGDAIQRRQVRAFLAMLRKLAREQETAILLLDHPSVRGMADGSG CCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC TANSVDWRNSVRSMLHLSDPDKDDPDARYLEVKKSNRGRTGEKTRIQWAGLTFSTALSAG CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHCCC SPRQAAAEREVDELFLRLLDKRNAQGRRVHASNAKGNAPSEFAQDPEAAGVTAHAFRSSM CCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHH ERLLTAGTIRAVETGPASKRRQHLERDGR HHHHHHHHHEEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA