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The map label for this gene is intZ [H]

Identifier: 146337601

GI number: 146337601

Start: 471638

End: 472927

Strand: Direct

Name: intZ [H]

Synonym: BRADO0462

Alternate gene names: 146337601

Gene position: 471638-472927 (Clockwise)

Preceding gene: 146337600

Following gene: 146337602

Centisome position: 6.33

GC content: 61.01

Gene sequence:

>1290_bases
GTGCTTACCCGTACTCCGATGGCAAAATTGACCAAGCGGGCCGTGGATGCGGCCGAGACTAGCGGCGCCGACCTCTTCAT
CTGGGATGACGAGTTGCCCGGCTTCGGCCTGAGGGTGAAGAAGAGCGGTGCAAAATCCTTCCTTGTCCAATATCGGAACG
CCAACGGCCGCAGCCGGCGGCTCACGATCGGGCGATTTGGGGTCCTCACGGTCGAGGAGGCACGCAAGGAAGCCAAATTG
GCCCTTGGGAATGTCGTGCGCGGTTCGGACCCGGCTGAGGCGAGAAAGCTCGCCCGTGGCGCGATGACGATCCAGGATCT
CGCCCGCGAGTATCTTGAAAAGGCCGAGCGCGGCCTGATCCTGACCCGTGGCGGCAAAGGTAAGAGCGAAACCACGCTTT
ACACGGATCGCGGGCGCGTGGAGCGCCACATCATTCCACTGATCGGCAAGCGGACCATCAAAGACTTTACGGCCTCCGAT
GCGGGGAGGTTCCTTCGGGATGTGATCGCCGGCAAGTCCGCGACGGATGTCAAAACCGAGAAGAAACGGGGGCGGGCGAT
CGTTACGGGCGGCAAAGGCACTGCCGCGCGGACGGCTGGACTGTTGGGCGGCATCTTCAGCTACGCCGTTGCGGAGGGAT
ATCGCCCCGACAATCCGGTCAGCGGCCTGCGTAGGCCGAAAGACGAAACCCGCGAATGGCGCCTCGATGACGAGGGCTAT
AGACGCTTGGGCAAAGCCCTGGAGACAGCAGAGGCGAATGGAGCGCACTGGCAACGAGTTCTTGCGTGCCGTGCTGCAGC
TCTGACTGGCTGTCGCTTGGACGAGATCCAAGGTCTATTGAAGTCGGAATTGGACACGAAGGGCATGGCGCTCCGACTCG
GGGACAGCAAGACCGGGAAAAGCGTTCGGCCGATCGGATCGGCGGCTGTTGCCGTGCTCGTCGCGGCGTCAGACAAATCC
AAGTCGAAGTATGTGTTTCCCTCGATCACGTCGGACGCGAAGCACCACACAGGGCTGACCCGGTGGCTCCAAGACATTGC
TGGAAAAGCAGTGCCTGGCATCACCAGTCACGGGTTGCGGCATTCGTACAGCTCGACCGCCGAGGATCTCGGCTTTTCAA
TCCCGACAATTAAGGCGCTGATCGGTCATTCTCGCGCGAGCGTCACGGAGGGGTATATCCATAAAATCGATTCAGCCTTG
CTGGCGGCTGCAGATCGCATCGCGAGTCACATCGATAACGCAATGACCGGCCGCTCGACCGAAAAGGTAGTCCAGCTCAG
GCAGGCTTAA

Upstream 100 bases:

>100_bases
TTTGAATTTCCGCGTGCTCCGTATACCTTATTTCGCAGCGATTTTCGAGGGCAGCGGACATTCTCAGGATTACCCGTGAT
TTCCGCCACGTGCTTACCCG

Downstream 100 bases:

>100_bases
CCCATCGGCGCGGCTAGGGTAGCTCCCGAAAAGCTGGCCCGCACCAGCCTGCCGCGTCGTCCTTTGCGGAATGCTCCAAG
CGGAGGGGCAATGAGCACTC

Product: putative phage related integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLTRTPMAKLTKRAVDAAETSGADLFIWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTIGRFGVLTVEEARKEAKL
ALGNVVRGSDPAEARKLARGAMTIQDLAREYLEKAERGLILTRGGKGKSETTLYTDRGRVERHIIPLIGKRTIKDFTASD
AGRFLRDVIAGKSATDVKTEKKRGRAIVTGGKGTAARTAGLLGGIFSYAVAEGYRPDNPVSGLRRPKDETREWRLDDEGY
RRLGKALETAEANGAHWQRVLACRAAALTGCRLDEIQGLLKSELDTKGMALRLGDSKTGKSVRPIGSAAVAVLVAASDKS
KSKYVFPSITSDAKHHTGLTRWLQDIAGKAVPGITSHGLRHSYSSTAEDLGFSIPTIKALIGHSRASVTEGYIHKIDSAL
LAAADRIASHIDNAMTGRSTEKVVQLRQA

Sequences:

>Translated_429_residues
MLTRTPMAKLTKRAVDAAETSGADLFIWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTIGRFGVLTVEEARKEAKL
ALGNVVRGSDPAEARKLARGAMTIQDLAREYLEKAERGLILTRGGKGKSETTLYTDRGRVERHIIPLIGKRTIKDFTASD
AGRFLRDVIAGKSATDVKTEKKRGRAIVTGGKGTAARTAGLLGGIFSYAVAEGYRPDNPVSGLRRPKDETREWRLDDEGY
RRLGKALETAEANGAHWQRVLACRAAALTGCRLDEIQGLLKSELDTKGMALRLGDSKTGKSVRPIGSAAVAVLVAASDKS
KSKYVFPSITSDAKHHTGLTRWLQDIAGKAVPGITSHGLRHSYSSTAEDLGFSIPTIKALIGHSRASVTEGYIHKIDSAL
LAAADRIASHIDNAMTGRSTEKVVQLRQA
>Mature_429_residues
MLTRTPMAKLTKRAVDAAETSGADLFIWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRRLTIGRFGVLTVEEARKEAKL
ALGNVVRGSDPAEARKLARGAMTIQDLAREYLEKAERGLILTRGGKGKSETTLYTDRGRVERHIIPLIGKRTIKDFTASD
AGRFLRDVIAGKSATDVKTEKKRGRAIVTGGKGTAARTAGLLGGIFSYAVAEGYRPDNPVSGLRRPKDETREWRLDDEGY
RRLGKALETAEANGAHWQRVLACRAAALTGCRLDEIQGLLKSELDTKGMALRLGDSKTGKSVRPIGSAAVAVLVAASDKS
KSKYVFPSITSDAKHHTGLTRWLQDIAGKAVPGITSHGLRHSYSSTAEDLGFSIPTIKALIGHSRASVTEGYIHKIDSAL
LAAADRIASHIDNAMTGRSTEKVVQLRQA

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=429, Percent_Identity=26.5734265734266, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46372; Mature: 46372

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRTPMAKLTKRAVDAAETSGADLFIWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRR
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCCCEE
LTIGRFGVLTVEEARKEAKLALGNVVRGSDPAEARKLARGAMTIQDLAREYLEKAERGLI
EEEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LTRGGKGKSETTLYTDRGRVERHIIPLIGKRTIKDFTASDAGRFLRDVIAGKSATDVKTE
EEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KKRGRAIVTGGKGTAARTAGLLGGIFSYAVAEGYRPDNPVSGLRRPKDETREWRLDDEGY
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCHHHH
RRLGKALETAEANGAHWQRVLACRAAALTGCRLDEIQGLLKSELDTKGMALRLGDSKTGK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
SVRPIGSAAVAVLVAASDKSKSKYVFPSITSDAKHHTGLTRWLQDIAGKAVPGITSHGLR
CCCCCCHHEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
HSYSSTAEDLGFSIPTIKALIGHSRASVTEGYIHKIDSALLAAADRIASHIDNAMTGRST
HHHCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EKVVQLRQA
HHHHHHHCC
>Mature Secondary Structure
MLTRTPMAKLTKRAVDAAETSGADLFIWDDELPGFGLRVKKSGAKSFLVQYRNANGRSRR
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCCCEE
LTIGRFGVLTVEEARKEAKLALGNVVRGSDPAEARKLARGAMTIQDLAREYLEKAERGLI
EEEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LTRGGKGKSETTLYTDRGRVERHIIPLIGKRTIKDFTASDAGRFLRDVIAGKSATDVKTE
EEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KKRGRAIVTGGKGTAARTAGLLGGIFSYAVAEGYRPDNPVSGLRRPKDETREWRLDDEGY
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCHHHH
RRLGKALETAEANGAHWQRVLACRAAALTGCRLDEIQGLLKSELDTKGMALRLGDSKTGK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
SVRPIGSAAVAVLVAASDKSKSKYVFPSITSDAKHHTGLTRWLQDIAGKAVPGITSHGLR
CCCCCCHHEEEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
HSYSSTAEDLGFSIPTIKALIGHSRASVTEGYIHKIDSALLAAADRIASHIDNAMTGRST
HHHCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EKVVQLRQA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]