Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337598
Identifier: 146337598
GI number: 146337598
Start: 465995
End: 466903
Strand: Direct
Name: 146337598
Synonym: BRADO0454
Alternate gene names: NA
Gene position: 465995-466903 (Clockwise)
Preceding gene: 146337597
Following gene: 146337599
Centisome position: 6.25
GC content: 61.28
Gene sequence:
>909_bases TTGCCGATGAGCTACTGCGTCTTCATGCATCGGACCGACTCGATCTACGACGACAGTCCGGCGGAGCAGTACCAATTTCC CAAGCAATATCTCGGCCGGGCCGAGGGCAGCGTCGGTGACTGGATCGTCTACCTCGAGCCGACGAAGGTGGCGGCCACGC GCGGTTATTTCGCGATCGCGCGGGTCGAGCGGATCATCCCAGATCCGAAGGCGTCGGGCATGTATCTCGCGCTTATTCAG CCCGGTTCATATCTCGAATTCGTCAACGCCGTTCCATTCAGCGAACTGGACGGTCCGATCGAGCGCGGCCTGCGCAATGA GGCCGGCAGGTTATCGGGACGGGCTCAGGCGGCCGTTCGACCGATTTCGCCGCAGGATTTCCAGCGCATCATCGAGCGCG GCTTGGACGATCACGACCCGATCCTGCCGCGCGTTCCAGACGTGGTCCACCCGCCGGATGGTTTTGCGGAAGAGCAGTCG CCGGTTGTTGTCGAGCAATTGCGCGAACGCATTCAGCGCCTCACGTCGCGCGTCTTGCGCGATCGCCTGTTTCGGACGAT CGTGCTCCGCGCTTATGGCGAGCGCTGCGCGATCACCGGGCTCAAGCTCATCAATGGCGGCGGGCGCGCTGAGGTGAATG CGGCCCATATTCGGCCTGTCGAGGCGAATGGACCGGACCTCGTGACCAACGGCCTTGCGCTTTCGGGTACGGTTCATTGG ATGTTCGACCGTGGACTGATCAGTCTGAGCGATGATCTCGCCATTCTGCTGTCTCGGCAGATCAACGACGCCGATCGAAT CCGCGGGTTCATCAATCCCTCGGGATTCGCTTTTTCTCCCGAGCGCGCTGGTGACCGGCCTCACCCGCATTTTCTGCAAT GGCATCGCGAGCATTGTTTCAAACACTAA
Upstream 100 bases:
>100_bases GTTCGGGCTGGTGCCGATCGCGGTTGCAAGCCGCCGGCACCGGCGAGCGTCCGCCGACCCGGTGTCGTTCTGTTGCTCGC GGAGGCCAATCGGCTAGACT
Downstream 100 bases:
>100_bases GTCGAAAAAGTCTCCTTCAGCGAATCCTTTTGCTGCCGTCGCTGCCTCCTGACATCCGGGACGACACATCCCGGATCGGC ATTGGCCGGGATAACATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPMSYCVFMHRTDSIYDDSPAEQYQFPKQYLGRAEGSVGDWIVYLEPTKVAATRGYFAIARVERIIPDPKASGMYLALIQ PGSYLEFVNAVPFSELDGPIERGLRNEAGRLSGRAQAAVRPISPQDFQRIIERGLDDHDPILPRVPDVVHPPDGFAEEQS PVVVEQLRERIQRLTSRVLRDRLFRTIVLRAYGERCAITGLKLINGGGRAEVNAAHIRPVEANGPDLVTNGLALSGTVHW MFDRGLISLSDDLAILLSRQINDADRIRGFINPSGFAFSPERAGDRPHPHFLQWHREHCFKH
Sequences:
>Translated_302_residues MPMSYCVFMHRTDSIYDDSPAEQYQFPKQYLGRAEGSVGDWIVYLEPTKVAATRGYFAIARVERIIPDPKASGMYLALIQ PGSYLEFVNAVPFSELDGPIERGLRNEAGRLSGRAQAAVRPISPQDFQRIIERGLDDHDPILPRVPDVVHPPDGFAEEQS PVVVEQLRERIQRLTSRVLRDRLFRTIVLRAYGERCAITGLKLINGGGRAEVNAAHIRPVEANGPDLVTNGLALSGTVHW MFDRGLISLSDDLAILLSRQINDADRIRGFINPSGFAFSPERAGDRPHPHFLQWHREHCFKH >Mature_301_residues PMSYCVFMHRTDSIYDDSPAEQYQFPKQYLGRAEGSVGDWIVYLEPTKVAATRGYFAIARVERIIPDPKASGMYLALIQP GSYLEFVNAVPFSELDGPIERGLRNEAGRLSGRAQAAVRPISPQDFQRIIERGLDDHDPILPRVPDVVHPPDGFAEEQSP VVVEQLRERIQRLTSRVLRDRLFRTIVLRAYGERCAITGLKLINGGGRAEVNAAHIRPVEANGPDLVTNGLALSGTVHWM FDRGLISLSDDLAILLSRQINDADRIRGFINPSGFAFSPERAGDRPHPHFLQWHREHCFKH
Specific function: Unknown
COG id: COG3440
COG function: function code V; Predicted restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33972; Mature: 33841
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS51042 CUT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSYCVFMHRTDSIYDDSPAEQYQFPKQYLGRAEGSVGDWIVYLEPTKVAATRGYFAIA CCCCEEEEEECCCCCCCCCCHHHHCCCHHHHCCCCCCCCCEEEEECCCHHHHHCCHHHHH RVERIIPDPKASGMYLALIQPGSYLEFVNAVPFSELDGPIERGLRNEAGRLSGRAQAAVR HHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCHHHEEC PISPQDFQRIIERGLDDHDPILPRVPDVVHPPDGFAEEQSPVVVEQLRERIQRLTSRVLR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DRLFRTIVLRAYGERCAITGLKLINGGGRAEVNAAHIRPVEANGPDLVTNGLALSGTVHW HHHHHHHHHHHHCCHHEEEEEEEECCCCCCEEEHEEEEEECCCCCCEEECCEEECCEEEE MFDRGLISLSDDLAILLSRQINDADRIRGFINPSGFAFSPERAGDRPHPHFLQWHREHCF EECCCEEECCCHHHHHHHHCCCCHHHHHCCCCCCCCEECHHHCCCCCCHHHHHHHHHHHC KH CC >Mature Secondary Structure PMSYCVFMHRTDSIYDDSPAEQYQFPKQYLGRAEGSVGDWIVYLEPTKVAATRGYFAIA CCCEEEEEECCCCCCCCCCHHHHCCCHHHHCCCCCCCCCEEEEECCCHHHHHCCHHHHH RVERIIPDPKASGMYLALIQPGSYLEFVNAVPFSELDGPIERGLRNEAGRLSGRAQAAVR HHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCHHHEEC PISPQDFQRIIERGLDDHDPILPRVPDVVHPPDGFAEEQSPVVVEQLRERIQRLTSRVLR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DRLFRTIVLRAYGERCAITGLKLINGGGRAEVNAAHIRPVEANGPDLVTNGLALSGTVHW HHHHHHHHHHHHCCHHEEEEEEEECCCCCCEEEHEEEEEECCCCCCEEECCEEECCEEEE MFDRGLISLSDDLAILLSRQINDADRIRGFINPSGFAFSPERAGDRPHPHFLQWHREHCF EECCCEEECCCHHHHHHHHCCCCHHHHHCCCCCCCCEECHHHCCCCCCHHHHHHHHHHHC KH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA