| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337511
Identifier: 146337511
GI number: 146337511
Start: 373356
End: 373727
Strand: Reverse
Name: 146337511
Synonym: BRADO0362
Alternate gene names: NA
Gene position: 373727-373356 (Counterclockwise)
Preceding gene: 146337512
Following gene: 146337509
Centisome position: 5.01
GC content: 66.4
Gene sequence:
>372_bases ATGAGTCTGCCGAATCTGCACCGCAATACCTGGCTCCATGTCGGCGCCGCGATCCTGCTCGCGCTCGCCGCAATGCTGCT GATCCGGCTGCACTACGCCAATGGTGCCACGCCCGCGGCGGAGAGCGTCCAGGCCGGCCGCAAGCTGGCGGAGTCCTGGT GCAGTCCGTGCCACGCCATCGACGCGAGCGGCGCCAGAGCCCAGACCCGGACGGCGCCTGATTTCGCGGCAGTGGCCAAC ATGCCATCGACGACCGAGCTGTCGCTGAAGGTGTTCCTGCAGAGCAGCCACCCGACGATGCCCAACGTCATCCTCACGTC GGAGCAGCGCGGCGACCTCGTCAACTACATCCTGAGCCTTCGACAGATCTGA
Upstream 100 bases:
>100_bases GGATTACTGCCTCAACGCGCCGACCATCGACCGCCTCGGCGTCGCCGTCACCAAGCACTGATCGCCGCTCTCCTCCCCTC ACATCAAGCGGAGCAAAGCG
Downstream 100 bases:
>100_bases CGCGGCGAGTCCTCCTTCTGACTACTTCGTCATCTCGGCGATCGCGTCCGCGATCGCGATCGTGCGCTTGGCCATCTCGG CATGCAGCCGCTCGACCATG
Product: putative cytochrome c (cytochrome c552)(cycB)
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Class I
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSLPNLHRNTWLHVGAAILLALAAMLLIRLHYANGATPAAESVQAGRKLAESWCSPCHAIDASGARAQTRTAPDFAAVAN MPSTTELSLKVFLQSSHPTMPNVILTSEQRGDLVNYILSLRQI
Sequences:
>Translated_123_residues MSLPNLHRNTWLHVGAAILLALAAMLLIRLHYANGATPAAESVQAGRKLAESWCSPCHAIDASGARAQTRTAPDFAAVAN MPSTTELSLKVFLQSSHPTMPNVILTSEQRGDLVNYILSLRQI >Mature_122_residues SLPNLHRNTWLHVGAAILLALAAMLLIRLHYANGATPAAESVQAGRKLAESWCSPCHAIDASGARAQTRTAPDFAAVANM PSTTELSLKVFLQSSHPTMPNVILTSEQRGDLVNYILSLRQI
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13244; Mature: 13113
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPNLHRNTWLHVGAAILLALAAMLLIRLHYANGATPAAESVQAGRKLAESWCSPCHAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC DASGARAQTRTAPDFAAVANMPSTTELSLKVFLQSSHPTMPNVILTSEQRGDLVNYILSL CCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH RQI HCC >Mature Secondary Structure SLPNLHRNTWLHVGAAILLALAAMLLIRLHYANGATPAAESVQAGRKLAESWCSPCHAI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHC DASGARAQTRTAPDFAAVANMPSTTELSLKVFLQSSHPTMPNVILTSEQRGDLVNYILSL CCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH RQI HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA