Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is yfeJ [H]
Identifier: 146337440
GI number: 146337440
Start: 292932
End: 293678
Strand: Reverse
Name: yfeJ [H]
Synonym: BRADO0280
Alternate gene names: 146337440
Gene position: 293678-292932 (Counterclockwise)
Preceding gene: 146337441
Following gene: 146337439
Centisome position: 3.94
GC content: 69.21
Gene sequence:
>747_bases TTGTCCACGCCGGCTGCGGCAGCTGCGCCGCGGCGGCCCGTGCTCATCATCCTGCACCAGGAAACCTCGAGCCCCGGGCG GATCGGCAACGCGCTGCGCGCGCGGGGCTACCGGCTGGACATCCGCCGGCCACGCTTCGGCGATCCGCTGCCGAAGACGC TGGCCGAGCATTCGGGCGCCGTGATCTTCGGCGGGCCGATGAGCGCCAACGATCCCGACGATTTCGTCCGGCGCGAGATC GACTGGATCGAGGTGCCGTTGCGCGAGCAGCGGCCGTTCCTCGGGATCTGCCTGGGGGCGCAGATGCTGGCGATCCAGCT CGGCGCCAAGGTCGCACCGCATCCGCAAGGGCGTGCCGAGATCGGCTACTACCCGATCCGCCCGACGCGCGCCGGCAAGA GGCTCTGCCCGCATTGGCCCGACAATGTCTATCACTGGCACCGCGAAGGTTTCGACCTGCCTTCCGGCGCCGACCTGCTC GCCGAGGGCGTCGACTTCCCGGTCCAGGCCTATCAATACGGCAACGCCACCGGGCTGCAGTTCCACCCTGATGTGACCTA CGCGATGATGTGCCGCTGGACCACGCGCGGTCATGCGCGGCTGGACACGCCGGGCGCCTGCCCGCGCCACCATCATTTTG AAGGCCGCGCCGTGCATGATGCTGCGGAACGGGTTTGGCTGAAGCATTTCCTGGATGGATGGCTGGCCCGGCAGCCGGTC GCGGCGATGGCCGAGGCAGCGGAGTAA
Upstream 100 bases:
>100_bases CCCCCGTTAACCTTCGTTTAGCTATGATCGCCAGGTGATGCTCAGGCCAGACCCTTCGCTCGACTCGAACGGGACCGCCA AGGCGGACGTTCGGCCCCTG
Downstream 100 bases:
>100_bases AAGTCGCGTCTTCGGACAGTCGGTGGGTGGTTAACTCGATAACTCTGTGTCAGCCCGGCTTCGCCAAGTGGCTACGCCGG GCACCACGCCTCGCCCTTGG
Product: glutamine amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREI DWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLL AEGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV AAMAEAAE
Sequences:
>Translated_248_residues MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREI DWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLL AEGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV AAMAEAAE >Mature_247_residues STPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPDDFVRREID WIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLA EGVDFPVQAYQYGNATGLQFHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPVA AMAEAAE
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 27666; Mature: 27535
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGA CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCE VIFGGPMSANDPDDFVRREIDWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAE EEECCCCCCCCHHHHHHHHCCCEECCHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC IGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLAEGVDFPVQAYQYGNATGLQ CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCE FHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV ECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH AAMAEAAE HHHHHCCC >Mature Secondary Structure STPAAAAAPRRPVLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGA CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCE VIFGGPMSANDPDDFVRREIDWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAE EEECCCCCCCCHHHHHHHHCCCEECCHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCC IGYYPIRPTRAGKRLCPHWPDNVYHWHREGFDLPSGADLLAEGVDFPVQAYQYGNATGLQ CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCE FHPDVTYAMMCRWTTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPV ECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH AAMAEAAE HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]