Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is folD [H]
Identifier: 146337437
GI number: 146337437
Start: 290848
End: 291732
Strand: Reverse
Name: folD [H]
Synonym: BRADO0277
Alternate gene names: 146337437
Gene position: 291732-290848 (Counterclockwise)
Preceding gene: 146337438
Following gene: 146337433
Centisome position: 3.91
GC content: 68.47
Gene sequence:
>885_bases ATGACCGCACGCATCATCGACGGGAAGATCATCGCGGCCGACCTGCGCGCGCAGGTCGCGCGGGAGGTGGAGCGGGTCAA GCACGACCTTGGCCTGACGCCGGGGCTTGCGGTGGTGCTGGTCGGCAACGACCCGGCCTCCGAGGTTTACGTCCGCAGCA AGCACACCCAGACCCAGGCCGCTGGCATGGCTTCGTTCGAGCACAAGCTGCCGGCCGACGTCGCTCAGGCTGAGCTGCTG GCGCTGATCTCGAAGCTCAATCAGGACCCCTCGGTGCATGGCATCCTGGTGCAGCTGCCGCTGCCGAAAGGGTTGGACAC CGAGGCCGTGATCAATGCCATCGACCCGGCCAAGGATGTCGACGGCCTACATCCGCACAATGCCGGCCGGCTCGCCGGCG GCCAGCCGGCGCTGGCGCCGTGCACGCCGCTCGGCTGCATCATCCTCAGCAAGACCGTGCATGCCTCGCTGGAGGGCATG AATGCGATCGTCATCGGCCGCTCCAACCTGGTCGGCCGCCCCCTGGTGCAGCTGCTTCTGAACGAGAACGCCACTGTCAC GATCGCCCATTCGCGCTCGCGCGATCTGCCGGCGCTGACTGCGCGCGCCGATCTCGTCTATGCGGCGGTCGGCCGTCCGG AGATGGTGAAGCGCGACTGGATCAAGCCGGGCGCGACCGTGATCGACGTCGGCATCAACCGCATTCCGACGCCTGAGGGC AAGACCAGGCTGGTCGGGGATGTCGCCTATGCCGAGGTCGCTGAAGTCGCCGGCGCGATCACGCCGGTGCCGGGCGGCGT CGGCCAGATGACGGTGGCCTGCCTGCTGGTGAACACGCTGCGCGCGGCCTGCGCCATCGCCGGGTTGCCGAAGCCTTCGG TCTAG
Upstream 100 bases:
>100_bases TGCCAGCCGTGGTCCACACCCTCCCCTGGAGAGGCGGGAGCCTGCGGCAGCGATCTTGCTGTCGACGAACTGAATAGGCG CTGCGACGAGGGGACCACGC
Downstream 100 bases:
>100_bases GCCGGACCAGCGGCTGTCTCCAGCAGCCGCCGATAGAAGCGGATCATGTCGCCATAGCCTTCGACCGACAGCCGCTCATT GGTGCCGTGAAAGCGCTTGA
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTARIIDGKIIAADLRAQVAREVERVKHDLGLTPGLAVVLVGNDPASEVYVRSKHTQTQAAGMASFEHKLPADVAQAELL ALISKLNQDPSVHGILVQLPLPKGLDTEAVINAIDPAKDVDGLHPHNAGRLAGGQPALAPCTPLGCIILSKTVHASLEGM NAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRDLPALTARADLVYAAVGRPEMVKRDWIKPGATVIDVGINRIPTPEG KTRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAACAIAGLPKPSV
Sequences:
>Translated_294_residues MTARIIDGKIIAADLRAQVAREVERVKHDLGLTPGLAVVLVGNDPASEVYVRSKHTQTQAAGMASFEHKLPADVAQAELL ALISKLNQDPSVHGILVQLPLPKGLDTEAVINAIDPAKDVDGLHPHNAGRLAGGQPALAPCTPLGCIILSKTVHASLEGM NAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRDLPALTARADLVYAAVGRPEMVKRDWIKPGATVIDVGINRIPTPEG KTRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAACAIAGLPKPSV >Mature_293_residues TARIIDGKIIAADLRAQVAREVERVKHDLGLTPGLAVVLVGNDPASEVYVRSKHTQTQAAGMASFEHKLPADVAQAELLA LISKLNQDPSVHGILVQLPLPKGLDTEAVINAIDPAKDVDGLHPHNAGRLAGGQPALAPCTPLGCIILSKTVHASLEGMN AIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRDLPALTARADLVYAAVGRPEMVKRDWIKPGATVIDVGINRIPTPEGK TRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAACAIAGLPKPSV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=298, Percent_Identity=45.9731543624161, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=44.7457627118644, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI94721354, Length=303, Percent_Identity=42.5742574257426, Blast_Score=190, Evalue=1e-48, Organism=Homo sapiens, GI36796743, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=49.2957746478873, Blast_Score=256, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17568735, Length=291, Percent_Identity=41.9243986254296, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319558, Length=285, Percent_Identity=47.3684210526316, Blast_Score=261, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6321643, Length=297, Percent_Identity=43.0976430976431, Blast_Score=233, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=27.0096463022508, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=45.6445993031359, Blast_Score=234, Evalue=4e-62, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=45.6445993031359, Blast_Score=234, Evalue=4e-62, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=45.6445993031359, Blast_Score=234, Evalue=4e-62, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=45.6445993031359, Blast_Score=234, Evalue=4e-62, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=46.5753424657534, Blast_Score=230, Evalue=7e-61, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=46.5753424657534, Blast_Score=230, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30626; Mature: 30495
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00766 THF_DHG_CYH_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARIIDGKIIAADLRAQVAREVERVKHDLGLTPGLAVVLVGNDPASEVYVRSKHTQTQA CCCEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHH AGMASFEHKLPADVAQAELLALISKLNQDPSVHGILVQLPLPKGLDTEAVINAIDPAKDV HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHC DGLHPHNAGRLAGGQPALAPCTPLGCIILSKTVHASLEGMNAIVIGRSNLVGRPLVQLLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH NENATVTIAHSRSRDLPALTARADLVYAAVGRPEMVKRDWIKPGATVIDVGINRIPTPEG CCCCEEEEEECCCCCCCCHHHHHHEEEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCC KTRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAACAIAGLPKPSV CCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TARIIDGKIIAADLRAQVAREVERVKHDLGLTPGLAVVLVGNDPASEVYVRSKHTQTQA CCEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCHHHH AGMASFEHKLPADVAQAELLALISKLNQDPSVHGILVQLPLPKGLDTEAVINAIDPAKDV HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCCHHHC DGLHPHNAGRLAGGQPALAPCTPLGCIILSKTVHASLEGMNAIVIGRSNLVGRPLVQLLL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH NENATVTIAHSRSRDLPALTARADLVYAAVGRPEMVKRDWIKPGATVIDVGINRIPTPEG CCCCEEEEEECCCCCCCCHHHHHHEEEEECCCCHHHHHHCCCCCCEEEEECCCCCCCCCC KTRLVGDVAYAEVAEVAGAITPVPGGVGQMTVACLLVNTLRAACAIAGLPKPSV CCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA