| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hisB [H]
Identifier: 146337379
GI number: 146337379
Start: 225121
End: 225714
Strand: Direct
Name: hisB [H]
Synonym: BRADO0212
Alternate gene names: 146337379
Gene position: 225121-225714 (Clockwise)
Preceding gene: 146337373
Following gene: 146337380
Centisome position: 3.02
GC content: 63.97
Gene sequence:
>594_bases ATGCGTAGCGCGGCCATCAAGCGCAAGACCAAAGAGACCGACATCGAGGTGTCCGTGAACCTCGACGGCACCGGCGTCGT CGAGATCGCGACCGGTATCGGCTTCTTCGATCACATGCTGGACCTGCTCGCCCGCCATTCCCGCATCGACATGACCGTCA AGGCGGTCGGCGACCTGCATATCGACTTCCACCACACCACCGAGGATGTCGGCATCGCGCTCGGCCAGGCTGTCAAGCAG GCGCTCGGCGACATGGCCGGCATCACCCGCTATGCCTCCATCCACATGCCGATGGACGAGACCTTGACCCGCGTCGTCAT CGACGTCTCGGGCCGGCCGATGCTGGTGTTCCGCACGGCCTTTTCGCGCGACAAGATCGGCGAGTTCGACACCGAGCTGG TGCGCGAATGGTTCAATGCGTTTGCGATGAACGCCGGCATCACCCTCCACGTCGAGACCTTGTACGGCGAGAACGCCCAT CACATCGCCGAATCCTGCTTCAAGGGTCTGGCGCGGGCGTTGCGCGCAGCGCTCGCGATCGATCCGCGCAACAAGGGTGA AGTGCCCTCCACCAAGGGTCAGCTCGGCGGCTGA
Upstream 100 bases:
>100_bases TCACCATGGCCCGAGATCAGGCACGATGCGCGTCATCCCGCAGTAGCTAAGGTGTCATCCGCCTGATAAAAGGGCCGCGT TTTCAAGGGAAAGCTGACCC
Downstream 100 bases:
>100_bases CCTCCCTCCTCCAAGCTCGTTCGTCAGAGGGATTTTCAAGATGCCCGTCTATACGGTCCACGCGCCCCTCGCTGCTGGAG CCGATCTGCGTTCGACGGAT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRSAAIKRKTKETDIEVSVNLDGTGVVEIATGIGFFDHMLDLLARHSRIDMTVKAVGDLHIDFHHTTEDVGIALGQAVKQ ALGDMAGITRYASIHMPMDETLTRVVIDVSGRPMLVFRTAFSRDKIGEFDTELVREWFNAFAMNAGITLHVETLYGENAH HIAESCFKGLARALRAALAIDPRNKGEVPSTKGQLGG
Sequences:
>Translated_197_residues MRSAAIKRKTKETDIEVSVNLDGTGVVEIATGIGFFDHMLDLLARHSRIDMTVKAVGDLHIDFHHTTEDVGIALGQAVKQ ALGDMAGITRYASIHMPMDETLTRVVIDVSGRPMLVFRTAFSRDKIGEFDTELVREWFNAFAMNAGITLHVETLYGENAH HIAESCFKGLARALRAALAIDPRNKGEVPSTKGQLGG >Mature_197_residues MRSAAIKRKTKETDIEVSVNLDGTGVVEIATGIGFFDHMLDLLARHSRIDMTVKAVGDLHIDFHHTTEDVGIALGQAVKQ ALGDMAGITRYASIHMPMDETLTRVVIDVSGRPMLVFRTAFSRDKIGEFDTELVREWFNAFAMNAGITLHVETLYGENAH HIAESCFKGLARALRAALAIDPRNKGEVPSTKGQLGG
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=45.8762886597938, Blast_Score=175, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=42.6605504587156, Blast_Score=178, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21545; Mature: 21545
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAAIKRKTKETDIEVSVNLDGTGVVEIATGIGFFDHMLDLLARHSRIDMTVKAVGDLH CCCCHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEE IDFHHTTEDVGIALGQAVKQALGDMAGITRYASIHMPMDETLTRVVIDVSGRPMLVFRTA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEECCCCEEEEEEEC FSRDKIGEFDTELVREWFNAFAMNAGITLHVETLYGENAHHIAESCFKGLARALRAALAI CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC DPRNKGEVPSTKGQLGG CCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSAAIKRKTKETDIEVSVNLDGTGVVEIATGIGFFDHMLDLLARHSRIDMTVKAVGDLH CCCCHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEE IDFHHTTEDVGIALGQAVKQALGDMAGITRYASIHMPMDETLTRVVIDVSGRPMLVFRTA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHEEEEECCCCEEEEEEEC FSRDKIGEFDTELVREWFNAFAMNAGITLHVETLYGENAHHIAESCFKGLARALRAALAI CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC DPRNKGEVPSTKGQLGG CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA