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The map label for this gene is dapB [H]

Identifier: 146337327

GI number: 146337327

Start: 171467

End: 172285

Strand: Reverse

Name: dapB [H]

Synonym: BRADO0158

Alternate gene names: 146337327

Gene position: 172285-171467 (Counterclockwise)

Preceding gene: 146337328

Following gene: 146337326

Centisome position: 2.31

GC content: 68.86

Gene sequence:

>819_bases
ATGTCCAGGATGCGCTTGATCGTTGCAGGAGCCGGCGGCCGCATGGGCCGGGCGCTGGTGCGCGCCATTGCCGACAGCGA
CGGCGCTGAGCTCGCCGGCGCGCTCGAAGCTCCGGGCTCTGAGCTGATCGGCAAGGATTCCGGCCTGCTCGCCGGCCTGC
CCGCCAACAACATCAAGCTCTCGGCCGATCTCTGGGCGATGTCGGCCGAGGCCGACGGCATCCTCGATTTCACCGTGCCG
GCCGCGACCATCGCCAATGTCGCCATCGCCGCCGAGCGCGGCATCGTCCACGTCGTCGGCACGACAGGCCTGTCGGCGTC
GGACGACGCCGTGATCAAGAGCGTCACCAAGCGCGCCATCGTCGTCCAGTCCGGCAATATGAGCCTCGGCGTCAATCTGC
TGTCGGCGCTGGTCAAGCAAGTGGCGAAGTCGCTCGACGCGAATTTCGACATCGAGATTCTCGAGATGCATCACAAGCAC
AAGGTCGACGCGCCTTCGGGCACCGCCTTGATGCTGGGCCGCGCGGCGGCGGAAGGACGCGGCATCACGCTGGACGGTCA
CTCCGCGCGCGGCCGCGACGGCATCACCGGCGCGCGCCGCTCCGGCGACATCGGCTTCGCCTCGCTGCGCGGCGGCACCG
CGGCCGGCGATCACAGCGTCATCTTCGCCGGTCCGTCCGAGCGCCTCGTGCTGTCGCACCAGGCCGAGGACCGCATGATC
TTCGCCCATGGCGCGCTGAAGGCGGCGCTGTGGGCCCATGGCAAGCCGCCGGGCTACTACACGATGGACGACGTGCTCGG
CCTCAAGGACCTGTTCTAA

Upstream 100 bases:

>100_bases
TGACGGCCCGCAGCCCTGAGCGCAGCCCGGCCCGGCGGCCGCCTCGGTTGCCGCAATGGCCAGCCCCGGCTATAGCCCTG
AAGGGGCGGAGGAACGCGAC

Downstream 100 bases:

>100_bases
TCAAACCAAGTGGATCTGTTAGCAATGAGCGAACGTCTCCTGGTGCTGGTGCGCCACGGCCAGAGCGAGTGGAACCTGAA
GAACCTGTTCACCGGCTGGA

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSRMRLIVAGAGGRMGRALVRAIADSDGAELAGALEAPGSELIGKDSGLLAGLPANNIKLSADLWAMSAEADGILDFTVP
AATIANVAIAAERGIVHVVGTTGLSASDDAVIKSVTKRAIVVQSGNMSLGVNLLSALVKQVAKSLDANFDIEILEMHHKH
KVDAPSGTALMLGRAAAEGRGITLDGHSARGRDGITGARRSGDIGFASLRGGTAAGDHSVIFAGPSERLVLSHQAEDRMI
FAHGALKAALWAHGKPPGYYTMDDVLGLKDLF

Sequences:

>Translated_272_residues
MSRMRLIVAGAGGRMGRALVRAIADSDGAELAGALEAPGSELIGKDSGLLAGLPANNIKLSADLWAMSAEADGILDFTVP
AATIANVAIAAERGIVHVVGTTGLSASDDAVIKSVTKRAIVVQSGNMSLGVNLLSALVKQVAKSLDANFDIEILEMHHKH
KVDAPSGTALMLGRAAAEGRGITLDGHSARGRDGITGARRSGDIGFASLRGGTAAGDHSVIFAGPSERLVLSHQAEDRMI
FAHGALKAALWAHGKPPGYYTMDDVLGLKDLF
>Mature_271_residues
SRMRLIVAGAGGRMGRALVRAIADSDGAELAGALEAPGSELIGKDSGLLAGLPANNIKLSADLWAMSAEADGILDFTVPA
ATIANVAIAAERGIVHVVGTTGLSASDDAVIKSVTKRAIVVQSGNMSLGVNLLSALVKQVAKSLDANFDIEILEMHHKHK
VDAPSGTALMLGRAAAEGRGITLDGHSARGRDGITGARRSGDIGFASLRGGTAAGDHSVIFAGPSERLVLSHQAEDRMIF
AHGALKAALWAHGKPPGYYTMDDVLGLKDLF

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=270, Percent_Identity=41.4814814814815, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 27960; Mature: 27829

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMRLIVAGAGGRMGRALVRAIADSDGAELAGALEAPGSELIGKDSGLLAGLPANNIKL
CCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEHHCCCCHHHCCCCCCEEEECCCCCEEE
SADLWAMSAEADGILDFTVPAATIANVAIAAERGIVHVVGTTGLSASDDAVIKSVTKRAI
EEEEEEEECCCCCEEEEECCHHHHHHEEEEECCCEEEEEECCCCCCCCHHHHHHHHHEEE
VVQSGNMSLGVNLLSALVKQVAKSLDANFDIEILEMHHKHKVDAPSGTALMLGRAAAEGR
EEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCEEEEECCCCCCC
GITLDGHSARGRDGITGARRSGDIGFASLRGGTAAGDHSVIFAGPSERLVLSHQAEDRMI
CEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCEE
FAHGALKAALWAHGKPPGYYTMDDVLGLKDLF
EECCHHHHHHHCCCCCCCCEEHHHHCCHHHCC
>Mature Secondary Structure 
SRMRLIVAGAGGRMGRALVRAIADSDGAELAGALEAPGSELIGKDSGLLAGLPANNIKL
CCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEHHCCCCHHHCCCCCCEEEECCCCCEEE
SADLWAMSAEADGILDFTVPAATIANVAIAAERGIVHVVGTTGLSASDDAVIKSVTKRAI
EEEEEEEECCCCCEEEEECCHHHHHHEEEEECCCEEEEEECCCCCCCCHHHHHHHHHEEE
VVQSGNMSLGVNLLSALVKQVAKSLDANFDIEILEMHHKHKVDAPSGTALMLGRAAAEGR
EEECCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCEEEEECCCCCCC
GITLDGHSARGRDGITGARRSGDIGFASLRGGTAAGDHSVIFAGPSERLVLSHQAEDRMI
CEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCEE
FAHGALKAALWAHGKPPGYYTMDDVLGLKDLF
EECCHHHHHHHCCCCCCCCEEHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA