| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gpmA [H]
Identifier: 146337326
GI number: 146337326
Start: 170819
End: 171442
Strand: Reverse
Name: gpmA [H]
Synonym: BRADO0157
Alternate gene names: 146337326
Gene position: 171442-170819 (Counterclockwise)
Preceding gene: 146337327
Following gene: 146337325
Centisome position: 2.3
GC content: 66.35
Gene sequence:
>624_bases ATGAGCGAACGTCTCCTGGTGCTGGTGCGCCACGGCCAGAGCGAGTGGAACCTGAAGAACCTGTTCACCGGCTGGAAGGA TCCTGACCTCACCGCGCAGGGCGTCAGCGAAGCCAAGGACGCCGGCCGCAAGCTGAAGGCGCATGGCCTGTCCTTCGATG TCGCCTTCACCTCCGAGCTGACCCGCGCCCAGCACACCCTGAAGCTGATCCTCGACGAGCTCGGCCAGCCCGGCCTGCCG ACGTCGAAGAACCTCGCGCTCAACGAGCGCGACTATGGCGATCTCTCCGGCCTCAATAAGGACGACGCCCGCGCCAAATG GGGCGAGGAGCAGGTCCACGTCTGGCGCCGCTCCTACGACGTCCCCCCGCCCGGCGGCGAAAGCCTCAAGGACACCCTCG CCCGCGCGCTGCCCTACTACGTCCAGGAAATCCTCCCCGGCGTCCTCAACGGCCAGCGCACTTTGGTCGCCGCCCACGGC AACTCGCTCCGCGCCTTGATCATGGTGCTGGAGAAGCTGACCCCGGAAGGCATTTTGAAGCGCGAGCTCGCCACCGGCGT TCCGATCATCTACCGCCTGAAGGCGGATTCGACGGTGGAGTCGAAGCTGGATCTGGCGGGCTGA
Upstream 100 bases:
>100_bases GGCGCTGTGGGCCCATGGCAAGCCGCCGGGCTACTACACGATGGACGACGTGCTCGGCCTCAAGGACCTGTTCTAATCAA ACCAAGTGGATCTGTTAGCA
Downstream 100 bases:
>100_bases GCGCGGCAACGTCAACGTTGCGATCGCGCTTCGGTCACGTTCGACGTTGCTCCTCTGAGTTGGATACCCGCCGTTCCCCA AGCGCCGCTGCACTCCCTCT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSERLLVLVRHGQSEWNLKNLFTGWKDPDLTAQGVSEAKDAGRKLKAHGLSFDVAFTSELTRAQHTLKLILDELGQPGLP TSKNLALNERDYGDLSGLNKDDARAKWGEEQVHVWRRSYDVPPPGGESLKDTLARALPYYVQEILPGVLNGQRTLVAAHG NSLRALIMVLEKLTPEGILKRELATGVPIIYRLKADSTVESKLDLAG
Sequences:
>Translated_207_residues MSERLLVLVRHGQSEWNLKNLFTGWKDPDLTAQGVSEAKDAGRKLKAHGLSFDVAFTSELTRAQHTLKLILDELGQPGLP TSKNLALNERDYGDLSGLNKDDARAKWGEEQVHVWRRSYDVPPPGGESLKDTLARALPYYVQEILPGVLNGQRTLVAAHG NSLRALIMVLEKLTPEGILKRELATGVPIIYRLKADSTVESKLDLAG >Mature_206_residues SERLLVLVRHGQSEWNLKNLFTGWKDPDLTAQGVSEAKDAGRKLKAHGLSFDVAFTSELTRAQHTLKLILDELGQPGLPT SKNLALNERDYGDLSGLNKDDARAKWGEEQVHVWRRSYDVPPPGGESLKDTLARALPYYVQEILPGVLNGQRTLVAAHGN SLRALIMVLEKLTPEGILKRELATGVPIIYRLKADSTVESKLDLAG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI4505753, Length=220, Percent_Identity=46.8181818181818, Blast_Score=191, Evalue=3e-49, Organism=Homo sapiens, GI50593010, Length=223, Percent_Identity=43.4977578475336, Blast_Score=190, Evalue=6e-49, Organism=Homo sapiens, GI71274132, Length=220, Percent_Identity=44.0909090909091, Blast_Score=177, Evalue=7e-45, Organism=Homo sapiens, GI4502445, Length=222, Percent_Identity=42.7927927927928, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI40353764, Length=222, Percent_Identity=42.7927927927928, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI310129614, Length=165, Percent_Identity=46.6666666666667, Blast_Score=134, Evalue=4e-32, Organism=Escherichia coli, GI1786970, Length=218, Percent_Identity=47.2477064220183, Blast_Score=192, Evalue=1e-50, Organism=Escherichia coli, GI1786857, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6322697, Length=213, Percent_Identity=41.3145539906103, Blast_Score=157, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6324516, Length=265, Percent_Identity=25.6603773584906, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320183, Length=269, Percent_Identity=23.7918215613383, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324857, Length=163, Percent_Identity=28.8343558282209, Blast_Score=75, Evalue=7e-15, Organism=Drosophila melanogaster, GI24646216, Length=216, Percent_Identity=43.5185185185185, Blast_Score=181, Evalue=2e-46, Organism=Drosophila melanogaster, GI85725270, Length=216, Percent_Identity=45.3703703703704, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI85725272, Length=216, Percent_Identity=45.3703703703704, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24650981, Length=216, Percent_Identity=45.3703703703704, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571815, Length=216, Percent_Identity=35.1851851851852, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI28571817, Length=216, Percent_Identity=35.1851851851852, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI24648979, Length=216, Percent_Identity=35.1851851851852, Blast_Score=124, Evalue=5e-29,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22858; Mature: 22727
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLLVLVRHGQSEWNLKNLFTGWKDPDLTAQGVSEAKDAGRKLKAHGLSFDVAFTSEL CCCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHH TRAQHTLKLILDELGQPGLPTSKNLALNERDYGDLSGLNKDDARAKWGEEQVHVWRRSYD HHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCC VPPPGGESLKDTLARALPYYVQEILPGVLNGQRTLVAAHGNSLRALIMVLEKLTPEGILK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHHHH RELATGVPIIYRLKADSTVESKLDLAG HHHHCCCCEEEEECCCCCHHHHHCCCC >Mature Secondary Structure SERLLVLVRHGQSEWNLKNLFTGWKDPDLTAQGVSEAKDAGRKLKAHGLSFDVAFTSEL CCCEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHH TRAQHTLKLILDELGQPGLPTSKNLALNERDYGDLSGLNKDDARAKWGEEQVHVWRRSYD HHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCC VPPPGGESLKDTLARALPYYVQEILPGVLNGQRTLVAAHGNSLRALIMVLEKLTPEGILK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHHHH RELATGVPIIYRLKADSTVESKLDLAG HHHHCCCCEEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA