| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337288
Identifier: 146337288
GI number: 146337288
Start: 130189
End: 130887
Strand: Reverse
Name: 146337288
Synonym: BRADO0115
Alternate gene names: NA
Gene position: 130887-130189 (Counterclockwise)
Preceding gene: 146337289
Following gene: 146337287
Centisome position: 1.76
GC content: 69.53
Gene sequence:
>699_bases ATGACATACCGTTTCGTTCCCGCGCTCTGTCGCGCTGCCGGTTTTGCCGCGCTGGCGCTGGTCGCGTTCGCCGATTCGCT TCAGGCGCAGAGCGCGACCACCGGCGTGCCGAATGCGCTGCAGGGCTTCTCGCAGAACCGCGACCAGCCAATCCAGATCG AGGCGGCCTCGCTGGAGATGCGCGACAAGAAGAAGGAGGCGACCTTCACCGGCAACGTGAAGGTCGTGCAGGGCGACACC ACCATGACCTCGAAGTCGCTGGTGGTGTTCTATGATGGCGGCGCCCAGCAGGGCGGCGCGAAGGCGACCAAGGCCACGCC GGCCGCGACGCCGGGGCCGGACGGCAGCTCGGCGATCCGGCGGCTCGAGGCGCGCGGCGACGTCAAGGTGACGCAGAAGG ACCAGGTCGTGACCGGCGAGACCGCGGTCTACGACACCAAGACCAACATGATCACGATGCAGGGCGGCGTGGTGCTGACC CAGTGCAAGAACGTGATGCGCGGCGACCGCCTGACCGTCGACATGACCACCGGCGTGTCGCGGGTCGAGTCGGACGGCGG GCGCGGCGTGCAGGTGCTGCTGCCGCAGGCCGGGTCGGGCTCGGGCGGCAATGGCGGCTGCGGATCATCGCCCGGCGGCA CCGGTTCGCCGGTCTCGGTCGGCGCGCCGCTGTCGCTGGGCGCCAACAAACCAAAGTGA
Upstream 100 bases:
>100_bases GTGGTGATGAATCTCGACAACATGAATGCCGCTCCGGCCGCTCCCGCCACCACGGCGAGCGCCGATCCGGGCCGTTCGGC CCGCAACGTGAAGTGATCCG
Downstream 100 bases:
>100_bases ACTCAACTATTTAGTAAAAGGCTTGCGGCTCCAGTTGAACCGCGCCGCACCTGCCTCTATCTAGCGGGCTGGCCGTCCTT GTCGCAGGGCCGCGCCGCCG
Product: putative OstA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTYRFVPALCRAAGFAALALVAFADSLQAQSATTGVPNALQGFSQNRDQPIQIEAASLEMRDKKKEATFTGNVKVVQGDT TMTSKSLVVFYDGGAQQGGAKATKATPAATPGPDGSSAIRRLEARGDVKVTQKDQVVTGETAVYDTKTNMITMQGGVVLT QCKNVMRGDRLTVDMTTGVSRVESDGGRGVQVLLPQAGSGSGGNGGCGSSPGGTGSPVSVGAPLSLGANKPK
Sequences:
>Translated_232_residues MTYRFVPALCRAAGFAALALVAFADSLQAQSATTGVPNALQGFSQNRDQPIQIEAASLEMRDKKKEATFTGNVKVVQGDT TMTSKSLVVFYDGGAQQGGAKATKATPAATPGPDGSSAIRRLEARGDVKVTQKDQVVTGETAVYDTKTNMITMQGGVVLT QCKNVMRGDRLTVDMTTGVSRVESDGGRGVQVLLPQAGSGSGGNGGCGSSPGGTGSPVSVGAPLSLGANKPK >Mature_231_residues TYRFVPALCRAAGFAALALVAFADSLQAQSATTGVPNALQGFSQNRDQPIQIEAASLEMRDKKKEATFTGNVKVVQGDTT MTSKSLVVFYDGGAQQGGAKATKATPAATPGPDGSSAIRRLEARGDVKVTQKDQVVTGETAVYDTKTNMITMQGGVVLTQ CKNVMRGDRLTVDMTTGVSRVESDGGRGVQVLLPQAGSGSGGNGGCGSSPGGTGSPVSVGAPLSLGANKPK
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005653 [H]
Pfam domain/function: PF03968 OstA [H]
EC number: NA
Molecular weight: Translated: 23643; Mature: 23512
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRFVPALCRAAGFAALALVAFADSLQAQSATTGVPNALQGFSQNRDQPIQIEAASLEM CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCHH RDKKKEATFTGNVKVVQGDTTMTSKSLVVFYDGGAQQGGAKATKATPAATPGPDGSSAIR HCCCCCCEEECCEEEEECCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH RLEARGDVKVTQKDQVVTGETAVYDTKTNMITMQGGVVLTQCKNVMRGDRLTVDMTTGVS HHHCCCCEEEECCCCEEECCEEEEECCCCEEEEECCEEEEHHHHHHCCCEEEEEECCCCH RVESDGGRGVQVLLPQAGSGSGGNGGCGSSPGGTGSPVSVGAPLSLGANKPK HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure TYRFVPALCRAAGFAALALVAFADSLQAQSATTGVPNALQGFSQNRDQPIQIEAASLEM CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCHH RDKKKEATFTGNVKVVQGDTTMTSKSLVVFYDGGAQQGGAKATKATPAATPGPDGSSAIR HCCCCCCEEECCEEEEECCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH RLEARGDVKVTQKDQVVTGETAVYDTKTNMITMQGGVVLTQCKNVMRGDRLTVDMTTGVS HHHCCCCEEEECCCCEEECCEEEEECCCCEEEEECCEEEEHHHHHHCCCEEEEEECCCCH RVESDGGRGVQVLLPQAGSGSGGNGGCGSSPGGTGSPVSVGAPLSLGANKPK HHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430; 2703463 [H]