| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301716
Identifier: 146301716
GI number: 146301716
Start: 4764125
End: 4764580
Strand: Direct
Name: 146301716
Synonym: Fjoh_3978
Alternate gene names: NA
Gene position: 4764125-4764580 (Clockwise)
Preceding gene: 146301712
Following gene: 146301717
Centisome position: 78.14
GC content: 34.65
Gene sequence:
>456_bases ATGAATAAGAAAATCCTTTCATTACTATTAATCTGCTTTTGTTTTCTAACACAAATTTCATTTGGACAGAGCGATGATAA ACGCACCAAAATTGAAATTTCAATAAAAGATGGAAACAAAACAATCACGGTTCCTTTACGTTCGGCTACGGTTTCGTTTA CCAAAGGAGCCAATTATAAAGATCCTGAAGATAAAACAGATAACAGAAGCTACTTTTTCTCTCTGGATTTTGAAAAGCAG GATATTAATTTACTGCGTGCTTTTGCAACCAGCAAAAACGGTCTTGACGGACAGATTACAATGGTCGATACGTACGGAAA AACACCTTCAAGAAAATTTGAATTTAAGGGCGCTAAATTAGACAGTTTGAGCGATCAGCTTACCGGAGATTATTCAAGCT CTTATTTTTCATTGTATTGCTCCCTTATAATTATCGATGGTGTAACCATACAATAA
Upstream 100 bases:
>100_bases AAATAAAAATCTAAACACTCCATTTACCAATTCGCAATTGTTAATGGATTTGGTATGAAGTAATCTTGCTGTCTAAAATA ATTTTAAAATCAAATTTATT
Downstream 100 bases:
>100_bases ATGACAATGACGCATTTAAAATATTTTGAAAAAAACGGCAGTCAATATACCTTGAAACGAGAATATGGTTTTGGCATTAT AGTGAGTGTTGGAATGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MNKKILSLLLICFCFLTQISFGQSDDKRTKIEISIKDGNKTITVPLRSATVSFTKGANYKDPEDKTDNRSYFFSLDFEKQ DINLLRAFATSKNGLDGQITMVDTYGKTPSRKFEFKGAKLDSLSDQLTGDYSSSYFSLYCSLIIIDGVTIQ
Sequences:
>Translated_151_residues MNKKILSLLLICFCFLTQISFGQSDDKRTKIEISIKDGNKTITVPLRSATVSFTKGANYKDPEDKTDNRSYFFSLDFEKQ DINLLRAFATSKNGLDGQITMVDTYGKTPSRKFEFKGAKLDSLSDQLTGDYSSSYFSLYCSLIIIDGVTIQ >Mature_151_residues MNKKILSLLLICFCFLTQISFGQSDDKRTKIEISIKDGNKTITVPLRSATVSFTKGANYKDPEDKTDNRSYFFSLDFEKQ DINLLRAFATSKNGLDGQITMVDTYGKTPSRKFEFKGAKLDSLSDQLTGDYSSSYFSLYCSLIIIDGVTIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16993; Mature: 16993
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKILSLLLICFCFLTQISFGQSDDKRTKIEISIKDGNKTITVPLRSATVSFTKGANYK CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEEECCEEEEEECCCCCC DPEDKTDNRSYFFSLDFEKQDINLLRAFATSKNGLDGQITMVDTYGKTPSRKFEFKGAKL CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCC DSLSDQLTGDYSSSYFSLYCSLIIIDGVTIQ CCCHHHHCCCCCHHHHHHHEEEEEECCEEEC >Mature Secondary Structure MNKKILSLLLICFCFLTQISFGQSDDKRTKIEISIKDGNKTITVPLRSATVSFTKGANYK CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEEECCEEEEEECCCCCC DPEDKTDNRSYFFSLDFEKQDINLLRAFATSKNGLDGQITMVDTYGKTPSRKFEFKGAKL CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCC DSLSDQLTGDYSSSYFSLYCSLIIIDGVTIQ CCCHHHHCCCCCHHHHHHHEEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA