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The map label for this gene is 146301673

Identifier: 146301673

GI number: 146301673

Start: 4688418

End: 4689338

Strand: Direct

Name: 146301673

Synonym: Fjoh_3935

Alternate gene names: NA

Gene position: 4688418-4689338 (Clockwise)

Preceding gene: 146301664

Following gene: 146301678

Centisome position: 76.9

GC content: 36.26

Gene sequence:

>921_bases
ATGCCTTGGACTATTCTTGAAAAACTATGGAAACGTTCTTTACAGCCAGTAAAAATTACTGCTGCCGACACTTCTCAAAC
CTGGGATCTGGAAATTAAGACTTTATATGAGCTGGGTATAAGCATGGAAGATACTCTGCAGTTTTTGTATTTTGAAAAAC
CTGATTTTGAAACTTTTAAAACATGGATTACCAGCAGGCAAAAGAAAACAACCTTAGTTGATGAAGACTCCTTAGAAGAT
GTTCTTTCTGAAAAGGATCTTCAATTTTGGAATGAAAACGGTTATGTAATCGTAAAAAATGCTATTTCAAAAAGTGACTG
TGAAGCGGCTCAAAAAGCTATTTGGGAATACTTGGAAATGGAACCTGATAATAACGAAACCTGGTATAAGAGACATCCGG
ATCAAAAAGGTTTAATGCTTAATTTTTCTGATCACGAAACTTTAAATAAAAACCGATTTTCTCCCAGAATAAAAAAAGCG
TATGAACAGCTTTACAATTCAAAGAATATTTATAAAACTATTGACAAAGTAAGTTTTAATCCGCCTGAAAATGAAAGTTT
TAGTTTTTTAGGAAGCGGACTTCATTGGGATACGAGTTTAAAACAGCCTATTGTTTTTGGACTTCAGGGACTGCTTTATC
TTACGGACTGCGGCCCGGATGATGGTGCTTTTCATTGTGTGCCAGGTTTTCATACTAAAATAAATGACTGGCTGAATAAT
CTGGAACCCGATGAAGATCCGAGACAGAAAGCTCTTCTAACACTAAAACCGGAACCTGTAATTGGCAATACTGGCGATTT
TATAATCTGGGACAGTACTTTACCGCATTGTGCAACGCCAAATAAAGGCAAGAACCCCAGAATGGTACAGTATCTTACTT
ATTTACCCGGTAATTATGATGCTTCGGGAGAATGGATATAA

Upstream 100 bases:

>100_bases
GGCATTCTTGTGTTAAATAAAAGAAACAAAAATCCCGTACAATTACTTGGTTTCAAGTCAATTCATTTTTTTAATTTCAC
TTGAAAAAAATATTTATTCT

Downstream 100 bases:

>100_bases
TTACAAAAGAGTTTCTTCCGGGTCACACGGAAAATAAATTTTTATTTCGGTCCCTTCTCCTACTTTTCCAACAGCTTCAA
TATTACCTCCAACGGTCTGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Superfamily Protein; Phytanoyl-CoA Dioxygenase Family; Phytanoyl-CoA Deoxygenase Family Protein; Phytanoyl-CoA Deoxygenase PhyH Family Protein

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPWTILEKLWKRSLQPVKITAADTSQTWDLEIKTLYELGISMEDTLQFLYFEKPDFETFKTWITSRQKKTTLVDEDSLED
VLSEKDLQFWNENGYVIVKNAISKSDCEAAQKAIWEYLEMEPDNNETWYKRHPDQKGLMLNFSDHETLNKNRFSPRIKKA
YEQLYNSKNIYKTIDKVSFNPPENESFSFLGSGLHWDTSLKQPIVFGLQGLLYLTDCGPDDGAFHCVPGFHTKINDWLNN
LEPDEDPRQKALLTLKPEPVIGNTGDFIIWDSTLPHCATPNKGKNPRMVQYLTYLPGNYDASGEWI

Sequences:

>Translated_306_residues
MPWTILEKLWKRSLQPVKITAADTSQTWDLEIKTLYELGISMEDTLQFLYFEKPDFETFKTWITSRQKKTTLVDEDSLED
VLSEKDLQFWNENGYVIVKNAISKSDCEAAQKAIWEYLEMEPDNNETWYKRHPDQKGLMLNFSDHETLNKNRFSPRIKKA
YEQLYNSKNIYKTIDKVSFNPPENESFSFLGSGLHWDTSLKQPIVFGLQGLLYLTDCGPDDGAFHCVPGFHTKINDWLNN
LEPDEDPRQKALLTLKPEPVIGNTGDFIIWDSTLPHCATPNKGKNPRMVQYLTYLPGNYDASGEWI
>Mature_305_residues
PWTILEKLWKRSLQPVKITAADTSQTWDLEIKTLYELGISMEDTLQFLYFEKPDFETFKTWITSRQKKTTLVDEDSLEDV
LSEKDLQFWNENGYVIVKNAISKSDCEAAQKAIWEYLEMEPDNNETWYKRHPDQKGLMLNFSDHETLNKNRFSPRIKKAY
EQLYNSKNIYKTIDKVSFNPPENESFSFLGSGLHWDTSLKQPIVFGLQGLLYLTDCGPDDGAFHCVPGFHTKINDWLNNL
EPDEDPRQKALLTLKPEPVIGNTGDFIIWDSTLPHCATPNKGKNPRMVQYLTYLPGNYDASGEWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35535; Mature: 35404

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWTILEKLWKRSLQPVKITAADTSQTWDLEIKTLYELGISMEDTLQFLYFEKPDFETFK
CCHHHHHHHHHCCCCCEEEEECCCCCEEEEEHEEHHHHCCCHHHHHHEEEECCCCHHHHH
TWITSRQKKTTLVDEDSLEDVLSEKDLQFWNENGYVIVKNAISKSDCEAAQKAIWEYLEM
HHHHCCCCCCEECCCHHHHHHHHHCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHC
EPDNNETWYKRHPDQKGLMLNFSDHETLNKNRFSPRIKKAYEQLYNSKNIYKTIDKVSFN
CCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
PPENESFSFLGSGLHWDTSLKQPIVFGLQGLLYLTDCGPDDGAFHCVPGFHTKINDWLNN
CCCCCCHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHC
LEPDEDPRQKALLTLKPEPVIGNTGDFIIWDSTLPHCATPNKGKNPRMVQYLTYLPGNYD
CCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
ASGEWI
CCCCCC
>Mature Secondary Structure 
PWTILEKLWKRSLQPVKITAADTSQTWDLEIKTLYELGISMEDTLQFLYFEKPDFETFK
CHHHHHHHHHCCCCCEEEEECCCCCEEEEEHEEHHHHCCCHHHHHHEEEECCCCHHHHH
TWITSRQKKTTLVDEDSLEDVLSEKDLQFWNENGYVIVKNAISKSDCEAAQKAIWEYLEM
HHHHCCCCCCEECCCHHHHHHHHHCCHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHC
EPDNNETWYKRHPDQKGLMLNFSDHETLNKNRFSPRIKKAYEQLYNSKNIYKTIDKVSFN
CCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
PPENESFSFLGSGLHWDTSLKQPIVFGLQGLLYLTDCGPDDGAFHCVPGFHTKINDWLNN
CCCCCCHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHC
LEPDEDPRQKALLTLKPEPVIGNTGDFIIWDSTLPHCATPNKGKNPRMVQYLTYLPGNYD
CCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
ASGEWI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA