| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301653
Identifier: 146301653
GI number: 146301653
Start: 4661447
End: 4662571
Strand: Direct
Name: 146301653
Synonym: Fjoh_3915
Alternate gene names: NA
Gene position: 4661447-4662571 (Clockwise)
Preceding gene: 146301652
Following gene: 146301656
Centisome position: 76.46
GC content: 32.8
Gene sequence:
>1125_bases ATGAAGATATCTCTTATTTTTATACTGGGATTTGTAACGATTTGTCAGTCTCAAATAAAAATTCCTGCTATTAAAGCTTC ATCTAAAACCTGTTACATAAAAGAAGGAAATGAAGAAAAAACAAAATGGAACTTAGATCCCAAAACAAAACCTGATTTGT ATGTAACAAACAAAAGTCCGAAAGGAAAAACCGTTACTTTTTACACCAATCAGGATTCTTTAACCGTAAAACTAAAACCG GGAAAAAAATCTGATTTTGTAGTTCTGCTAAATGAAAAAGACAGTTGCTATACGCGCATTGAATGTCCGGCTCTGAAAGA TTTCTCAAAGCTGAAACCGGAAATACACGATACAATTCCTTTTGCGCTTTCGGAGTATAACAATATTATTTTTAAAGTCA CATTAGATGATAAAGAAACGCTTGATTTAAAATTCGATTCTGGAACAACTGATTTTCTTTTAACAAATGAAATATTGAAA CAATTACAACTTAAGAGTCTAAACGGGCATAGTTTTAAGCTTGGAAACCAAATCTGGAGAGAACAGCAGATTTTCCCTGT TGAACTATCAGGACAAGGCACTACAGGTCGTTTTGGGTGGAATTTATTTGATGGTAAAATTGTAGAAATTGATTACGATA AAAAGCTTTTTATAATACATTCGAAACTGCCTAAACGAGACAAAAGTTACACAAAACTGGATATGGAGTTTACGCATACT TTGTTTTGTATTCAGGGTTCACTGCAAATAAAAGATAAAGCTTATAAAGGGCGTTTTCTTTTTGATAATGGTTATCAGCG TACCGCGATGCTTGATCAGCAGTTAATAAAGGAACAGCAATATCCAAAAGAAATTCTGCCTGTTTTAAAAAAAACAATTT TAAAAAACGGACAAGGTGAAGAAATTCCGGTTTTGACTGTAAAGAATGAAAAATTGTTTTTGGGAAATTTATGTTTGAAT GATGTGCCGGTTCAGCTGCTTGCAACAAGCAATCCAGCACAATTCAAAACTCATATTTTAGGAAGCGAATTCCTAAAAAG ATTCAATACTATATTGGATTTTCAGGAGAATAAAGTCTATCTAAAACCAAATTCATTATGGAATGATCCCTACACAGAAG GCTGA
Upstream 100 bases:
>100_bases CAAAACCAAATATCTTATAAAATTCGCCGAAAGTATATTATTTAATTGAAATTGATTAATTTTCATCTATAGATTTTTAG AAAAATTGAAATTATACACT
Downstream 100 bases:
>100_bases AAACAAAAATTAATAATTAAAAATTGACAATTAATAATTGTGAATTATCAATTGTCAATTCACTTCCTATTCCTCATCCA CTTTTCTACAGGTTCTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKISLIFILGFVTICQSQIKIPAIKASSKTCYIKEGNEEKTKWNLDPKTKPDLYVTNKSPKGKTVTFYTNQDSLTVKLKP GKKSDFVVLLNEKDSCYTRIECPALKDFSKLKPEIHDTIPFALSEYNNIIFKVTLDDKETLDLKFDSGTTDFLLTNEILK QLQLKSLNGHSFKLGNQIWREQQIFPVELSGQGTTGRFGWNLFDGKIVEIDYDKKLFIIHSKLPKRDKSYTKLDMEFTHT LFCIQGSLQIKDKAYKGRFLFDNGYQRTAMLDQQLIKEQQYPKEILPVLKKTILKNGQGEEIPVLTVKNEKLFLGNLCLN DVPVQLLATSNPAQFKTHILGSEFLKRFNTILDFQENKVYLKPNSLWNDPYTEG
Sequences:
>Translated_374_residues MKISLIFILGFVTICQSQIKIPAIKASSKTCYIKEGNEEKTKWNLDPKTKPDLYVTNKSPKGKTVTFYTNQDSLTVKLKP GKKSDFVVLLNEKDSCYTRIECPALKDFSKLKPEIHDTIPFALSEYNNIIFKVTLDDKETLDLKFDSGTTDFLLTNEILK QLQLKSLNGHSFKLGNQIWREQQIFPVELSGQGTTGRFGWNLFDGKIVEIDYDKKLFIIHSKLPKRDKSYTKLDMEFTHT LFCIQGSLQIKDKAYKGRFLFDNGYQRTAMLDQQLIKEQQYPKEILPVLKKTILKNGQGEEIPVLTVKNEKLFLGNLCLN DVPVQLLATSNPAQFKTHILGSEFLKRFNTILDFQENKVYLKPNSLWNDPYTEG >Mature_374_residues MKISLIFILGFVTICQSQIKIPAIKASSKTCYIKEGNEEKTKWNLDPKTKPDLYVTNKSPKGKTVTFYTNQDSLTVKLKP GKKSDFVVLLNEKDSCYTRIECPALKDFSKLKPEIHDTIPFALSEYNNIIFKVTLDDKETLDLKFDSGTTDFLLTNEILK QLQLKSLNGHSFKLGNQIWREQQIFPVELSGQGTTGRFGWNLFDGKIVEIDYDKKLFIIHSKLPKRDKSYTKLDMEFTHT LFCIQGSLQIKDKAYKGRFLFDNGYQRTAMLDQQLIKEQQYPKEILPVLKKTILKNGQGEEIPVLTVKNEKLFLGNLCLN DVPVQLLATSNPAQFKTHILGSEFLKRFNTILDFQENKVYLKPNSLWNDPYTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43033; Mature: 43033
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISLIFILGFVTICQSQIKIPAIKASSKTCYIKEGNEEKTKWNLDPKTKPDLYVTNKSP CEEEEEEHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCEEEECCCC KGKTVTFYTNQDSLTVKLKPGKKSDFVVLLNEKDSCYTRIECPALKDFSKLKPEIHDTIP CCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHCCCHHHHCCC FALSEYNNIIFKVTLDDKETLDLKFDSGTTDFLLTNEILKQLQLKSLNGHSFKLGNQIWR HHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCEEECCHHHHH EQQIFPVELSGQGTTGRFGWNLFDGKIVEIDYDKKLFIIHSKLPKRDKSYTKLDMEFTHT CCCEEEEEECCCCCCCEECEEEECCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEEE LFCIQGSLQIKDKAYKGRFLFDNGYQRTAMLDQQLIKEQQYPKEILPVLKKTILKNGQGE EEEEECCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC EIPVLTVKNEKLFLGNLCLNDVPVQLLATSNPAQFKTHILGSEFLKRFNTILDFQENKVY EEEEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCEEE LKPNSLWNDPYTEG ECCCCCCCCCCCCC >Mature Secondary Structure MKISLIFILGFVTICQSQIKIPAIKASSKTCYIKEGNEEKTKWNLDPKTKPDLYVTNKSP CEEEEEEHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCEEEECCCC KGKTVTFYTNQDSLTVKLKPGKKSDFVVLLNEKDSCYTRIECPALKDFSKLKPEIHDTIP CCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCHHHCCCHHHHCCC FALSEYNNIIFKVTLDDKETLDLKFDSGTTDFLLTNEILKQLQLKSLNGHSFKLGNQIWR HHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCEEECCHHHHH EQQIFPVELSGQGTTGRFGWNLFDGKIVEIDYDKKLFIIHSKLPKRDKSYTKLDMEFTHT CCCEEEEEECCCCCCCEECEEEECCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEEE LFCIQGSLQIKDKAYKGRFLFDNGYQRTAMLDQQLIKEQQYPKEILPVLKKTILKNGQGE EEEEECCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC EIPVLTVKNEKLFLGNLCLNDVPVQLLATSNPAQFKTHILGSEFLKRFNTILDFQENKVY EEEEEEEECCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCEEE LKPNSLWNDPYTEG ECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA