Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301625
Identifier: 146301625
GI number: 146301625
Start: 4632393
End: 4632905
Strand: Reverse
Name: 146301625
Synonym: Fjoh_3886
Alternate gene names: NA
Gene position: 4632905-4632393 (Counterclockwise)
Preceding gene: 146301627
Following gene: 146301624
Centisome position: 75.99
GC content: 35.09
Gene sequence:
>513_bases ATGGATACGAAACAAAGAAATTTATACCGACTGGATGAACTTTCTGATTATAAGATTGCTTCTAATTACTCAGATGTAAG AGGATGGAAAATAGTAGATGCTGACAACCGCACTATAGGAACTATTGATAACCTTTGGGTGAATAAGGATATGCAGCGAG TGATTTATCTGGATGTTAAGGTCGATAAAAAATTAATAGAAGACGGACGCAAGGAAGTACACGATGCTATTGCTTACGAC AATGGAAAAGAGTTTGTTTATAAGGATGGAGACAGCCACATTATCATTCCCATTGGATCGGTAAACATTAATAAAGACAC AAAGATTGTTATGGCCAACAGCATAGGATATGACACCTTTAGAAATACAAGCAGATATAACAGCCAGGATAAGTTCGACA GGAACTATGAAAGAAATGTAATGCGATCTTATTATCCTTCTAACGATCCTGAATTTTATGACAGTGATGATGATAAATTT TACAATCGTCGAGAGTTCGAAAATCATTTATAA
Upstream 100 bases:
>100_bases GTAGGCACAGACACTATAGCAAAATAATAAAGAGCAAGACAGGCACGATTAGTTTTCAAGTCTGTCAAAAAAATTAAGTG TAACACATAAACAAAATACC
Downstream 100 bases:
>100_bases TTTCATTACTCCAGTATAACTGTTCAATAATAAATAGAATTAATTATGGAAACAGAGATTTTTAATTTAGAAAAAAAATA TTGGCAGGGCATGGAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MDTKQRNLYRLDELSDYKIASNYSDVRGWKIVDADNRTIGTIDNLWVNKDMQRVIYLDVKVDKKLIEDGRKEVHDAIAYD NGKEFVYKDGDSHIIIPIGSVNINKDTKIVMANSIGYDTFRNTSRYNSQDKFDRNYERNVMRSYYPSNDPEFYDSDDDKF YNRREFENHL
Sequences:
>Translated_170_residues MDTKQRNLYRLDELSDYKIASNYSDVRGWKIVDADNRTIGTIDNLWVNKDMQRVIYLDVKVDKKLIEDGRKEVHDAIAYD NGKEFVYKDGDSHIIIPIGSVNINKDTKIVMANSIGYDTFRNTSRYNSQDKFDRNYERNVMRSYYPSNDPEFYDSDDDKF YNRREFENHL >Mature_170_residues MDTKQRNLYRLDELSDYKIASNYSDVRGWKIVDADNRTIGTIDNLWVNKDMQRVIYLDVKVDKKLIEDGRKEVHDAIAYD NGKEFVYKDGDSHIIIPIGSVNINKDTKIVMANSIGYDTFRNTSRYNSQDKFDRNYERNVMRSYYPSNDPEFYDSDDDKF YNRREFENHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20239; Mature: 20239
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKQRNLYRLDELSDYKIASNYSDVRGWKIVDADNRTIGTIDNLWVNKDMQRVIYLDVK CCCCCCCEEECCCCCCEEEECCCCCCCCEEEEECCCCEECCHHHEEECCCCEEEEEEEEE VDKKLIEDGRKEVHDAIAYDNGKEFVYKDGDSHIIIPIGSVNINKDTKIVMANSIGYDTF CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEECCCCEEEEECCCCCCHH RNTSRYNSQDKFDRNYERNVMRSYYPSNDPEFYDSDDDKFYNRREFENHL CCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MDTKQRNLYRLDELSDYKIASNYSDVRGWKIVDADNRTIGTIDNLWVNKDMQRVIYLDVK CCCCCCCEEECCCCCCEEEECCCCCCCCEEEEECCCCEECCHHHEEECCCCEEEEEEEEE VDKKLIEDGRKEVHDAIAYDNGKEFVYKDGDSHIIIPIGSVNINKDTKIVMANSIGYDTF CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEECCCCEEEEECCCCCCHH RNTSRYNSQDKFDRNYERNVMRSYYPSNDPEFYDSDDDKFYNRREFENHL CCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA