| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bglX [H]
Identifier: 146301600
GI number: 146301600
Start: 4577233
End: 4579512
Strand: Direct
Name: bglX [H]
Synonym: Fjoh_3861
Alternate gene names: 146301600
Gene position: 4577233-4579512 (Clockwise)
Preceding gene: 146301599
Following gene: 146301601
Centisome position: 75.08
GC content: 36.49
Gene sequence:
>2280_bases ATGAAAAAACAAATTAAAAATTATGCCTTTCTACTGTTAGCTGTTTCTATGAACGGATATGCACAAACCAAAAAACATAT GGATACCAAAAAACCAATTGAAGACCGTATTTCACTTTTGATGAAAGAAATGACATTAGAAGAAAAGGTAGGTCAAATGA ATCAATATAATGGTTCATGGGATGTTACCGGACCAAAACCAGAATCTGGTTCTAATGAAGAAAAATACAATAACATAAAA AAAGGATGGGTCGGTTCTATGCTTACCGTTCGCGGTGTTAAGGAAGTCAGAGCAGTACAAAAAATCGCTGTCGAAGAAAC CCGACTTGGAATTCCGCTTATTTTTGGATTTGATGTTATACACGGATACAAAACCCTAAGTCCTATTCCGTTGGCAGAAG CGGCAAGCTGGGATTTAGAAGCCATCAAAAATTCGGCACGAGTAGCAGCACTCGAAGCTTCAGCTTCAGGATTAAACTGG ACTTTTGCTCCTAATGTTGACATTTCAAATGATGCCAGATGGGGGAGAGTTATGGAAGGTGCAGGCGAAGATCCATATTT AGGAAGTAAAATTGCAACGGCAAGAGTAAAAGGTTTTCAAGGTGAAAGTTTCAGTAATACCTCTATTGTTGCCTGCGCGA AGCATTTTGCCGCTTATGGTTTTGTAGAAGCAGGCCGAGAATACAATAGTGTAGATATGAGCAATTCTAAATTGTACAAT ACCGTTTTACCGCCTTTTAAAGCAACGGTAGATGCCGGAATACGCACTTTTATGAATTCATTTAATACCTTAAATGGTAT TCCGGCAACAGGAAGTGTCTTTTTGCAAAGAGACATTTTAAAAGGTGCCTGGGGATTTAAAGGATTTGTAGTATCTGACT GGGCTTCTATCGCCGAAATGATTACTCACGGTTACGCTGCAGATGCAGCCGATGCGGCTAAAAAAGCGGCTATTGCAGGT TCAGACATGGATATGGAATCGAATGTGTATGTAACAGAATTAGTTCAGTTAGTAAAAAAAGGATCTGTAAAAGAAAGCGT GATTGACGATGCTGTACGCAGAATTCTTCGAGTAAAATTTGAATTAGGTTTATTTGACGATCCTTATAAATATTGTGATG AAGCCCGTGAAAAGGCAAACATTGGCAGCAAGGCAAATAATGATGACGTTCTGGACATGGCAAAAAAATCGATTGTTTTA TTAAAAAATGATAAAAACCTTCTGCCTTTAAAAAAATCGGGAGCTAAAATTGCTTTAATTGGTGCTTTGGCAAATGATAA AAACAGCCCTTTAGGAAGCTGGAGAATTGCTGCTGATGATAATACCGCTGTTTCTGTACTAGAAGGAATGCAGCAATATA AAAACAGCGCCTTAGTTTATGAAAAAGGAACAGATGTAGCCTTAAATAAACAATTATTCGTAGACGAAGTAAAAATTAAT ACAACCGATTTTTCTGGATTTGAAGCGGCAAAAAAAGCAGCAAAAGAAGCAGAAGTTGTAGTAATGGTGCTGGGTGAAAT TGGTTTTCAAAGCGGTGAAGGACGAAGCAGAACAGAATTAGACTTACCTGGAAACCAGCAGCAATTATTAGAAGAAGTTT ATAAAGTAAATCCAAATATTGTTTTGGTTTTAAACAACGGACGTCCGTTAGCTTTACCATGGGCAGCAGAACATATTCCT GCTATTGTTGAAGCCTGGCAGTTAGGAACACAATCCGGAAACGCAATTGCACAGGTTTTATACGGAGATTATAACCCAAG TGGTAAACTGCCAATGTCATTTCCCAGAAATGTAGGCCAATGCCCTATTTATTACAATTTATACAATACCGGAAGACCTA CAGATAAAGATAAAAATGTGTTTTGGTCGCACTATTCTGATGTAGAAAAAACGCCTTTATATCCTTTTGGTTATGGATTA AGCTATACTTCTTTCATTTATAAAAATTTAAAAATTGCAAAACCTTCATTTCAAAAAGGAGAAAAAATTAAAGTTTCTGT TGAGGTTACCAATACAGGAAATTTTGACGGAAAAGAAGTAGTTCAATTGTACATAAACGATCCTGCCGCCAGTATTGTAA GACCTGTAAAAGAATTAAAAGGTTTTGAACTTATCGAATTAAAAAAAGGAGAAACTAAAACAGTTCAGTTTACTTTAACT GATTCAGCTCTTGGTTTTTATGACAATGACGGTAAATTTTTAGTAGAACCAGGTTTATTCAATGTTATGGTGGGCTGGAA TTCTAATGATGGACTTACAACTAAATTTGAACTAAAATAA
Upstream 100 bases:
>100_bases GATTTCGCACAAATAAAACAGCAAAATTATATTATTCATTAAAAAAATAAACTTCAACAACTAATACCAAAAATATTTAA GATATAAACAAAACCACCTA
Downstream 100 bases:
>100_bases AGTATTTAAAAAAAAACACATAGAAACATAGATTCATTATTTGTGAAGAAAAGTTAAAAAGAAACTCATTTATCAAACAC AGCTATGTGAATTAAAAATA
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MKKQIKNYAFLLLAVSMNGYAQTKKHMDTKKPIEDRISLLMKEMTLEEKVGQMNQYNGSWDVTGPKPESGSNEEKYNNIK KGWVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIFGFDVIHGYKTLSPIPLAEAASWDLEAIKNSARVAALEASASGLNW TFAPNVDISNDARWGRVMEGAGEDPYLGSKIATARVKGFQGESFSNTSIVACAKHFAAYGFVEAGREYNSVDMSNSKLYN TVLPPFKATVDAGIRTFMNSFNTLNGIPATGSVFLQRDILKGAWGFKGFVVSDWASIAEMITHGYAADAADAAKKAAIAG SDMDMESNVYVTELVQLVKKGSVKESVIDDAVRRILRVKFELGLFDDPYKYCDEAREKANIGSKANNDDVLDMAKKSIVL LKNDKNLLPLKKSGAKIALIGALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKNSALVYEKGTDVALNKQLFVDEVKIN TTDFSGFEAAKKAAKEAEVVVMVLGEIGFQSGEGRSRTELDLPGNQQQLLEEVYKVNPNIVLVLNNGRPLALPWAAEHIP AIVEAWQLGTQSGNAIAQVLYGDYNPSGKLPMSFPRNVGQCPIYYNLYNTGRPTDKDKNVFWSHYSDVEKTPLYPFGYGL SYTSFIYKNLKIAKPSFQKGEKIKVSVEVTNTGNFDGKEVVQLYINDPAASIVRPVKELKGFELIELKKGETKTVQFTLT DSALGFYDNDGKFLVEPGLFNVMVGWNSNDGLTTKFELK
Sequences:
>Translated_759_residues MKKQIKNYAFLLLAVSMNGYAQTKKHMDTKKPIEDRISLLMKEMTLEEKVGQMNQYNGSWDVTGPKPESGSNEEKYNNIK KGWVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIFGFDVIHGYKTLSPIPLAEAASWDLEAIKNSARVAALEASASGLNW TFAPNVDISNDARWGRVMEGAGEDPYLGSKIATARVKGFQGESFSNTSIVACAKHFAAYGFVEAGREYNSVDMSNSKLYN TVLPPFKATVDAGIRTFMNSFNTLNGIPATGSVFLQRDILKGAWGFKGFVVSDWASIAEMITHGYAADAADAAKKAAIAG SDMDMESNVYVTELVQLVKKGSVKESVIDDAVRRILRVKFELGLFDDPYKYCDEAREKANIGSKANNDDVLDMAKKSIVL LKNDKNLLPLKKSGAKIALIGALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKNSALVYEKGTDVALNKQLFVDEVKIN TTDFSGFEAAKKAAKEAEVVVMVLGEIGFQSGEGRSRTELDLPGNQQQLLEEVYKVNPNIVLVLNNGRPLALPWAAEHIP AIVEAWQLGTQSGNAIAQVLYGDYNPSGKLPMSFPRNVGQCPIYYNLYNTGRPTDKDKNVFWSHYSDVEKTPLYPFGYGL SYTSFIYKNLKIAKPSFQKGEKIKVSVEVTNTGNFDGKEVVQLYINDPAASIVRPVKELKGFELIELKKGETKTVQFTLT DSALGFYDNDGKFLVEPGLFNVMVGWNSNDGLTTKFELK >Mature_759_residues MKKQIKNYAFLLLAVSMNGYAQTKKHMDTKKPIEDRISLLMKEMTLEEKVGQMNQYNGSWDVTGPKPESGSNEEKYNNIK KGWVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIFGFDVIHGYKTLSPIPLAEAASWDLEAIKNSARVAALEASASGLNW TFAPNVDISNDARWGRVMEGAGEDPYLGSKIATARVKGFQGESFSNTSIVACAKHFAAYGFVEAGREYNSVDMSNSKLYN TVLPPFKATVDAGIRTFMNSFNTLNGIPATGSVFLQRDILKGAWGFKGFVVSDWASIAEMITHGYAADAADAAKKAAIAG SDMDMESNVYVTELVQLVKKGSVKESVIDDAVRRILRVKFELGLFDDPYKYCDEAREKANIGSKANNDDVLDMAKKSIVL LKNDKNLLPLKKSGAKIALIGALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKNSALVYEKGTDVALNKQLFVDEVKIN TTDFSGFEAAKKAAKEAEVVVMVLGEIGFQSGEGRSRTELDLPGNQQQLLEEVYKVNPNIVLVLNNGRPLALPWAAEHIP AIVEAWQLGTQSGNAIAQVLYGDYNPSGKLPMSFPRNVGQCPIYYNLYNTGRPTDKDKNVFWSHYSDVEKTPLYPFGYGL SYTSFIYKNLKIAKPSFQKGEKIKVSVEVTNTGNFDGKEVVQLYINDPAASIVRPVKELKGFELIELKKGETKTVQFTLT DSALGFYDNDGKFLVEPGLFNVMVGWNSNDGLTTKFELK
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=736, Percent_Identity=43.75, Blast_Score=593, Evalue=1e-170,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83524; Mature: 83524
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIKNYAFLLLAVSMNGYAQTKKHMDTKKPIEDRISLLMKEMTLEEKVGQMNQYNGSW CCCHHHCEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE DVTGPKPESGSNEEKYNNIKKGWVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIFGFDVI ECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH HGYKTLSPIPLAEAASWDLEAIKNSARVAALEASASGLNWTFAPNVDISNDARWGRVMEG HCHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHCC AGEDPYLGSKIATARVKGFQGESFSNTSIVACAKHFAAYGFVEAGREYNSVDMSNSKLYN CCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEH TVLPPFKATVDAGIRTFMNSFNTLNGIPATGSVFLQRDILKGAWGFKGFVVSDWASIAEM HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHH ITHGYAADAADAAKKAAIAGSDMDMESNVYVTELVQLVKKGSVKESVIDDAVRRILRVKF HHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELGLFDDPYKYCDEAREKANIGSKANNDDVLDMAKKSIVLLKNDKNLLPLKKSGAKIALI HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEE GALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKNSALVYEKGTDVALNKQLFVDEVKIN EEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEEEE TTDFSGFEAAKKAAKEAEVVVMVLGEIGFQSGEGRSRTELDLPGNQQQLLEEVYKVNPNI CCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCE VLVLNNGRPLALPWAAEHIPAIVEAWQLGTQSGNAIAQVLYGDYNPSGKLPMSFPRNVGQ EEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC CPIYYNLYNTGRPTDKDKNVFWSHYSDVEKTPLYPFGYGLSYTSFIYKNLKIAKPSFQKG CEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCC EKIKVSVEVTNTGNFDGKEVVQLYINDPAASIVRPVKELKGFELIELKKGETKTVQFTLT CEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEE DSALGFYDNDGKFLVEPGLFNVMVGWNSNDGLTTKFELK CCCCCEEECCCCEEECCCEEEEEEEECCCCCCCEEEEEC >Mature Secondary Structure MKKQIKNYAFLLLAVSMNGYAQTKKHMDTKKPIEDRISLLMKEMTLEEKVGQMNQYNGSW CCCHHHCEEEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE DVTGPKPESGSNEEKYNNIKKGWVGSMLTVRGVKEVRAVQKIAVEETRLGIPLIFGFDVI ECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH HGYKTLSPIPLAEAASWDLEAIKNSARVAALEASASGLNWTFAPNVDISNDARWGRVMEG HCHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHCC AGEDPYLGSKIATARVKGFQGESFSNTSIVACAKHFAAYGFVEAGREYNSVDMSNSKLYN CCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEH TVLPPFKATVDAGIRTFMNSFNTLNGIPATGSVFLQRDILKGAWGFKGFVVSDWASIAEM HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHH ITHGYAADAADAAKKAAIAGSDMDMESNVYVTELVQLVKKGSVKESVIDDAVRRILRVKF HHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ELGLFDDPYKYCDEAREKANIGSKANNDDVLDMAKKSIVLLKNDKNLLPLKKSGAKIALI HCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEE GALANDKNSPLGSWRIAADDNTAVSVLEGMQQYKNSALVYEKGTDVALNKQLFVDEVKIN EEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCEEECCEEEEEEEEEE TTDFSGFEAAKKAAKEAEVVVMVLGEIGFQSGEGRSRTELDLPGNQQQLLEEVYKVNPNI CCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCE VLVLNNGRPLALPWAAEHIPAIVEAWQLGTQSGNAIAQVLYGDYNPSGKLPMSFPRNVGQ EEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC CPIYYNLYNTGRPTDKDKNVFWSHYSDVEKTPLYPFGYGLSYTSFIYKNLKIAKPSFQKG CEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCC EKIKVSVEVTNTGNFDGKEVVQLYINDPAASIVRPVKELKGFELIELKKGETKTVQFTLT CEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEE DSALGFYDNDGKFLVEPGLFNVMVGWNSNDGLTTKFELK CCCCCEEECCCCEEECCCEEEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]