Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301552
Identifier: 146301552
GI number: 146301552
Start: 4520530
End: 4521510
Strand: Reverse
Name: 146301552
Synonym: Fjoh_3813
Alternate gene names: NA
Gene position: 4521510-4520530 (Counterclockwise)
Preceding gene: 146301553
Following gene: 146301543
Centisome position: 74.16
GC content: 40.06
Gene sequence:
>981_bases ATGAAAAATACCTTTTTTATGCTGCTATGCATGGTTGTCTCAGCAGGATGTGACAGCGAAAAAAAAACATCGGGTACTCC AGTGGTTCTTAAAGGCAGATATACGCTGACAGAGACTGGACTTTATCCTGAAGGGATTGACTATGATTTAAACAATGGAA GGTTTCTGTTGAGCTCCCTTTATAAGGGTGTTGTCTATTCAGTAAATCCAAAAGGCGAAATGGCTGTTTTTGCATCAAGC AGTAAACTTGTTCTGCCTACAGGCGTTTTTACAGATGAAACCAGAAACCGATTAATAGTGGCTAATGCTGATTTAGGTGT TTCGCAGAAAAGCACCGCTTCAAGTGCCGGAACAATTGCCTCGGTAAGTGTTTTCGATCTTTCATCAGGAGCGTTAATCA AAGAAATTGATTTAAAAAATTTCACGCCAAATAAAGGTTCGTGTCCAAATGATATTGCGGTGGATAATGAAGGAAATATT TATATAACCGATTCGTTCGCTCCCAATATCTATAAAATTGATCTTAATTATAATGCGTCGATATTTGCCAGCAGTATGCT TTTTACACCCGCCGCTGATAAATTCGGATTAAATGGAATTGTTTTCCACCCAGACGGCTATCTGCTGGCCGTAAAAACAG ATGACGCTAAGCTGTATAAAATTTCTCTCCCTGTTCCGTCATCCGTTACTGAAGTGAAGGGAATGTCTTTCAGTTCTCCA GACGGCATTGAGCTTGATAAAAACAATAATCTTGTGCTGGTAGAAAACGGCCTAGGCCAGGGTACTGCATACACGTTTTC CAGCAGTGATAAATGGAAAACGGCCGTAAAAATCAAGCAGACCAATATTGGAAAGCAGGAATTTCCAACCACAGCGGCAA TGGCATCAGATGGGAATATATATGTTGTGAATTCGAAATTAGGAGAACTTCTTTCGGGAGATCGATCGCAGTCAATTTAC ACCATTCAAAAAATAGACTGA
Upstream 100 bases:
>100_bases ATCTAGTTCAACCTTATTTCTTAAACCAGTTCATTTTTATTTCTGCTTTTCTACACCAGATTTGCATTGTCAATAAGACA ATAATCTAAAATGAAATAAA
Downstream 100 bases:
>100_bases TTTAGACAAGGTGCTTTAGCTTGTTTAGATTACATTACACACAAAAAGGCTGCATACCGTCAGAGACTCATTTTGGCGGT CTGTAGTTTATTAGAAGCGA
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: NA
Alternate protein names: Superoxide Dismutase; SMP-30/Gluconolaconase/LRE Domain Protein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKNTFFMLLCMVVSAGCDSEKKTSGTPVVLKGRYTLTETGLYPEGIDYDLNNGRFLLSSLYKGVVYSVNPKGEMAVFASS SKLVLPTGVFTDETRNRLIVANADLGVSQKSTASSAGTIASVSVFDLSSGALIKEIDLKNFTPNKGSCPNDIAVDNEGNI YITDSFAPNIYKIDLNYNASIFASSMLFTPAADKFGLNGIVFHPDGYLLAVKTDDAKLYKISLPVPSSVTEVKGMSFSSP DGIELDKNNNLVLVENGLGQGTAYTFSSSDKWKTAVKIKQTNIGKQEFPTTAAMASDGNIYVVNSKLGELLSGDRSQSIY TIQKID
Sequences:
>Translated_326_residues MKNTFFMLLCMVVSAGCDSEKKTSGTPVVLKGRYTLTETGLYPEGIDYDLNNGRFLLSSLYKGVVYSVNPKGEMAVFASS SKLVLPTGVFTDETRNRLIVANADLGVSQKSTASSAGTIASVSVFDLSSGALIKEIDLKNFTPNKGSCPNDIAVDNEGNI YITDSFAPNIYKIDLNYNASIFASSMLFTPAADKFGLNGIVFHPDGYLLAVKTDDAKLYKISLPVPSSVTEVKGMSFSSP DGIELDKNNNLVLVENGLGQGTAYTFSSSDKWKTAVKIKQTNIGKQEFPTTAAMASDGNIYVVNSKLGELLSGDRSQSIY TIQKID >Mature_326_residues MKNTFFMLLCMVVSAGCDSEKKTSGTPVVLKGRYTLTETGLYPEGIDYDLNNGRFLLSSLYKGVVYSVNPKGEMAVFASS SKLVLPTGVFTDETRNRLIVANADLGVSQKSTASSAGTIASVSVFDLSSGALIKEIDLKNFTPNKGSCPNDIAVDNEGNI YITDSFAPNIYKIDLNYNASIFASSMLFTPAADKFGLNGIVFHPDGYLLAVKTDDAKLYKISLPVPSSVTEVKGMSFSSP DGIELDKNNNLVLVENGLGQGTAYTFSSSDKWKTAVKIKQTNIGKQEFPTTAAMASDGNIYVVNSKLGELLSGDRSQSIY TIQKID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35035; Mature: 35035
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTFFMLLCMVVSAGCDSEKKTSGTPVVLKGRYTLTETGLYPEGIDYDLNNGRFLLSSL CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCEECCCCEEHHHHH YKGVVYSVNPKGEMAVFASSSKLVLPTGVFTDETRNRLIVANADLGVSQKSTASSAGTIA HCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEE SVSVFDLSSGALIKEIDLKNFTPNKGSCPNDIAVDNEGNIYITDSFAPNIYKIDLNYNAS EEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCC IFASSMLFTPAADKFGLNGIVFHPDGYLLAVKTDDAKLYKISLPVPSSVTEVKGMSFSSP EEEEEEEECCCCHHCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCHHHHCCCCCCCC DGIELDKNNNLVLVENGLGQGTAYTFSSSDKWKTAVKIKQTNIGKQEFPTTAAMASDGNI CCEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCHHHCCCEEEEECCCCE YVVNSKLGELLSGDRSQSIYTIQKID EEEECCHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure MKNTFFMLLCMVVSAGCDSEKKTSGTPVVLKGRYTLTETGLYPEGIDYDLNNGRFLLSSL CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCEECCCCEEHHHHH YKGVVYSVNPKGEMAVFASSSKLVLPTGVFTDETRNRLIVANADLGVSQKSTASSAGTIA HCCEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEE SVSVFDLSSGALIKEIDLKNFTPNKGSCPNDIAVDNEGNIYITDSFAPNIYKIDLNYNAS EEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCC IFASSMLFTPAADKFGLNGIVFHPDGYLLAVKTDDAKLYKISLPVPSSVTEVKGMSFSSP EEEEEEEECCCCHHCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCHHHHCCCCCCCC DGIELDKNNNLVLVENGLGQGTAYTFSSSDKWKTAVKIKQTNIGKQEFPTTAAMASDGNI CCEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCHHHCCCEEEEECCCCE YVVNSKLGELLSGDRSQSIYTIQKID EEEECCHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA