| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301427
Identifier: 146301427
GI number: 146301427
Start: 4376212
End: 4377456
Strand: Direct
Name: 146301427
Synonym: Fjoh_3685
Alternate gene names: NA
Gene position: 4376212-4377456 (Clockwise)
Preceding gene: 146301426
Following gene: 146301434
Centisome position: 71.78
GC content: 37.11
Gene sequence:
>1245_bases ATGGTTGCAGTGATAAAAACAAGCTCGTCCATAAGAGGTATTCTGAATTACAACGAAAATAAAGTTGAGATCGGAAAGGC TGAATGTATAAGTGCTGTGAATTATCCATTGAAATTGGAAAAACTGAATTTCACTTCAAAATTAAACCGCTTCTTGAAAC TGGCAGAACTCAATACAAATGCGAAGCGAAACACAGTGCACATCTCGCTCAACTTTGATCCATCGGAGAATCATTCGAAA GAAAAACTGGCTGAAATTGCAGACACCTATATGGAAAAACTGGGATTCGGCAGACAGCCTTATCTAGTATACCAGCATCA TGATGCAGGGCATCCGCACTGCCATATAGTGACAAACAACATTCAGAGAGACGGAAAAAGAATCGATCTGCATTTACTGG GAATCAGAAAATCAGAACCTGCCCGAAAAGAAATTGAAGAAATGTTCGGGCTTGTAAAAGCCGAAGGAAGAAAACAGAAA GAACAATTTTCATTAAATCCGATAGATGTCGGCAGAGTCCAATACGGAAAAGCAGAGTCCAGAAAGGCAATCAATTCAGT TTTAAATCAGGTATTGTTTGACTATAAATATTCAAGCCTGCCTGAACTCAACGCGGTTTTAAACCTCTACTATGTTCATG CAGACAGAGGAAGCGAGGAATCTAGAGTTTTTAAAAATAATGGATTGCTTTACAAGATACTTGACCAAAATTCAAAACCG ATAGGCGTGCCCATAAAAGCCAGTGAATTCTACAGCAGACCTACCTTAAAATTTCTGGAGGAAAAATTCAAGGTAAACGA AACAAAGAAGGAATATTGCAAAAATCATGTCAGAAATGCTTTGAGACAGGCTTTTTATGATGAAAGAATGACTTCCGTAG AGAGATTATCCGAAAGGCTCAAAGATGAAGCGATTCATACTATTTTAAGAAAAAGCAGTGAGGGAAATCTTTATGGAATT ACTTTTATCGACTTTAAAGCACAGACCGTTGTCAATGAAAGCAGTCTGAGTAAAGAATTCAGTGCAAAAGGAATACAGGA AAGCTGTGCAATGAACATTCTTGCACTTGAAAGGAAATACCAAAAGTCCAATTCAACCGATTCAGAAATCTTTCAAAATC TCGAATCGCAAGAGTTTGTAAAAGAAAATCTGGTTGCTATACTGCTCCGTGGGGAAAAGATAAATGACTATGTTTCGAAA AAATTTAAACAGAAGAAGAAAAGAAGTCTTTATAAAGGGATTTAA
Upstream 100 bases:
>100_bases CCGAATTCAAAGGACATCTTTATCTGTTCGAAATCCAAAGAGAAAGGCTTTTTGATAAAATGGAGGAGGTTTCAGTCCAC ACCCACAAAATCGCAGAAAA
Downstream 100 bases:
>100_bases AATAATTAAGGGTGTAAAATTACACCCTTAACTTTGTCTCCTATTTTCGTTAGTACATCCATACTATAGATAAACTATTT TAGTAAAGTTTTTTTTCCTT
Product: relaxase/mobilization nuclease family protein
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Family Protein; MobB Protein; Mobilisation Protein; Relaxase/Mobilization Nuclease Domain Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MVAVIKTSSSIRGILNYNENKVEIGKAECISAVNYPLKLEKLNFTSKLNRFLKLAELNTNAKRNTVHISLNFDPSENHSK EKLAEIADTYMEKLGFGRQPYLVYQHHDAGHPHCHIVTNNIQRDGKRIDLHLLGIRKSEPARKEIEEMFGLVKAEGRKQK EQFSLNPIDVGRVQYGKAESRKAINSVLNQVLFDYKYSSLPELNAVLNLYYVHADRGSEESRVFKNNGLLYKILDQNSKP IGVPIKASEFYSRPTLKFLEEKFKVNETKKEYCKNHVRNALRQAFYDERMTSVERLSERLKDEAIHTILRKSSEGNLYGI TFIDFKAQTVVNESSLSKEFSAKGIQESCAMNILALERKYQKSNSTDSEIFQNLESQEFVKENLVAILLRGEKINDYVSK KFKQKKKRSLYKGI
Sequences:
>Translated_414_residues MVAVIKTSSSIRGILNYNENKVEIGKAECISAVNYPLKLEKLNFTSKLNRFLKLAELNTNAKRNTVHISLNFDPSENHSK EKLAEIADTYMEKLGFGRQPYLVYQHHDAGHPHCHIVTNNIQRDGKRIDLHLLGIRKSEPARKEIEEMFGLVKAEGRKQK EQFSLNPIDVGRVQYGKAESRKAINSVLNQVLFDYKYSSLPELNAVLNLYYVHADRGSEESRVFKNNGLLYKILDQNSKP IGVPIKASEFYSRPTLKFLEEKFKVNETKKEYCKNHVRNALRQAFYDERMTSVERLSERLKDEAIHTILRKSSEGNLYGI TFIDFKAQTVVNESSLSKEFSAKGIQESCAMNILALERKYQKSNSTDSEIFQNLESQEFVKENLVAILLRGEKINDYVSK KFKQKKKRSLYKGI >Mature_414_residues MVAVIKTSSSIRGILNYNENKVEIGKAECISAVNYPLKLEKLNFTSKLNRFLKLAELNTNAKRNTVHISLNFDPSENHSK EKLAEIADTYMEKLGFGRQPYLVYQHHDAGHPHCHIVTNNIQRDGKRIDLHLLGIRKSEPARKEIEEMFGLVKAEGRKQK EQFSLNPIDVGRVQYGKAESRKAINSVLNQVLFDYKYSSLPELNAVLNLYYVHADRGSEESRVFKNNGLLYKILDQNSKP IGVPIKASEFYSRPTLKFLEEKFKVNETKKEYCKNHVRNALRQAFYDERMTSVERLSERLKDEAIHTILRKSSEGNLYGI TFIDFKAQTVVNESSLSKEFSAKGIQESCAMNILALERKYQKSNSTDSEIFQNLESQEFVKENLVAILLRGEKINDYVSK KFKQKKKRSLYKGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47686; Mature: 47686
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVIKTSSSIRGILNYNENKVEIGKAECISAVNYPLKLEKLNFTSKLNRFLKLAELNTN CEEEEECCCCHHEEECCCCCEEEECHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC AKRNTVHISLNFDPSENHSKEKLAEIADTYMEKLGFGRQPYLVYQHHDAGHPHCHIVTNN CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC IQRDGKRIDLHLLGIRKSEPARKEIEEMFGLVKAEGRKQKEQFSLNPIDVGRVQYGKAES CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCHHH RKAINSVLNQVLFDYKYSSLPELNAVLNLYYVHADRGSEESRVFKNNGLLYKILDQNSKP HHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCHHHEECCCCCEEEEECCCCCC IGVPIKASEFYSRPTLKFLEEKFKVNETKKEYCKNHVRNALRQAFYDERMTSVERLSERL CCCEEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEAIHTILRKSSEGNLYGITFIDFKAQTVVNESSLSKEFSAKGIQESCAMNILALERKY HHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHH QKSNSTDSEIFQNLESQEFVKENLVAILLRGEKINDYVSKKFKQKKKRSLYKGI HCCCCCHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVAVIKTSSSIRGILNYNENKVEIGKAECISAVNYPLKLEKLNFTSKLNRFLKLAELNTN CEEEEECCCCHHEEECCCCCEEEECHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC AKRNTVHISLNFDPSENHSKEKLAEIADTYMEKLGFGRQPYLVYQHHDAGHPHCHIVTNN CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC IQRDGKRIDLHLLGIRKSEPARKEIEEMFGLVKAEGRKQKEQFSLNPIDVGRVQYGKAES CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCHHH RKAINSVLNQVLFDYKYSSLPELNAVLNLYYVHADRGSEESRVFKNNGLLYKILDQNSKP HHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCCHHHEECCCCCEEEEECCCCCC IGVPIKASEFYSRPTLKFLEEKFKVNETKKEYCKNHVRNALRQAFYDERMTSVERLSERL CCCEEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDEAIHTILRKSSEGNLYGITFIDFKAQTVVNESSLSKEFSAKGIQESCAMNILALERKY HHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHH QKSNSTDSEIFQNLESQEFVKENLVAILLRGEKINDYVSKKFKQKKKRSLYKGI HCCCCCHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA