| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301377
Identifier: 146301377
GI number: 146301377
Start: 4330165
End: 4330761
Strand: Direct
Name: 146301377
Synonym: Fjoh_3635
Alternate gene names: NA
Gene position: 4330165-4330761 (Clockwise)
Preceding gene: 146301376
Following gene: 146301390
Centisome position: 71.02
GC content: 32.83
Gene sequence:
>597_bases ATGAAGAAAATTTTAATCATGTTAACTCTTTTACTGCCTATTTACAATTCTTTTTCGCAAACAAAAGATGATACTTCAAA ACATTTGGTATTTAAAGGTGTTCCGCTTGATGGCACGCTTGAAGAATATGTATTAAAAATGAAACAAAATGGATTCGACC ATCTAAGCACGAAAGATGGAGTGGCAACATTGCAGGGAGATTTTGCAGGTTATAAAGACTGCTATGTAGGCGTTTCTACA TTAAACCAGAAAGATTTAGTCCACAAAATAGCCGTTCTTTTTCCTGAAAAAGATACTTGGTCAACTCTTTACGATAATTA TATTAATCTAAAAGAGATGCTGACAGAAAAATATGGGAAACCTTCTGCTGTGGTTGAGAAGTTTGACAACCGCTCTTCTG AGCCCAAAGATGATGGAACAAAAATGTTTGATGTTAAGTTTGACCGTTGTAAATATTATTCGATTTGGGAAACAGACAAG GGAAAAATACAATTATCAATTGATCATAAAAGTGTAACAAGCTGTTTCGTTAAATTAGCATATTTTGACAAAATCAATAG TTCAACAGTAAAAAAAACTGCACTAGACGATTTGTAA
Upstream 100 bases:
>100_bases ACTTTATTTAATACTTACCGTAAAGAAATTGTTTTAGATCAACTGCCGAGAACTGAAAGTAGCAATCATCATTAATTAAA GAAATTAAAAATAATAGATT
Downstream 100 bases:
>100_bases TTATCTTTTAATATTATCTTAAATCGTTTAGTTTATCTAATTTATAATTTCAGGCAGATAAGGATTAATTTCATTCCCAT AACTATCAATTCTACAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKKILIMLTLLLPIYNSFSQTKDDTSKHLVFKGVPLDGTLEEYVLKMKQNGFDHLSTKDGVATLQGDFAGYKDCYVGVST LNQKDLVHKIAVLFPEKDTWSTLYDNYINLKEMLTEKYGKPSAVVEKFDNRSSEPKDDGTKMFDVKFDRCKYYSIWETDK GKIQLSIDHKSVTSCFVKLAYFDKINSSTVKKTALDDL
Sequences:
>Translated_198_residues MKKILIMLTLLLPIYNSFSQTKDDTSKHLVFKGVPLDGTLEEYVLKMKQNGFDHLSTKDGVATLQGDFAGYKDCYVGVST LNQKDLVHKIAVLFPEKDTWSTLYDNYINLKEMLTEKYGKPSAVVEKFDNRSSEPKDDGTKMFDVKFDRCKYYSIWETDK GKIQLSIDHKSVTSCFVKLAYFDKINSSTVKKTALDDL >Mature_198_residues MKKILIMLTLLLPIYNSFSQTKDDTSKHLVFKGVPLDGTLEEYVLKMKQNGFDHLSTKDGVATLQGDFAGYKDCYVGVST LNQKDLVHKIAVLFPEKDTWSTLYDNYINLKEMLTEKYGKPSAVVEKFDNRSSEPKDDGTKMFDVKFDRCKYYSIWETDK GKIQLSIDHKSVTSCFVKLAYFDKINSSTVKKTALDDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22643; Mature: 22643
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILIMLTLLLPIYNSFSQTKDDTSKHLVFKGVPLDGTLEEYVLKMKQNGFDHLSTKDG CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC VATLQGDFAGYKDCYVGVSTLNQKDLVHKIAVLFPEKDTWSTLYDNYINLKEMLTEKYGK CEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCC PSAVVEKFDNRSSEPKDDGTKMFDVKFDRCKYYSIWETDKGKIQLSIDHKSVTSCFVKLA CHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEEEECHHHHHHHHHHHH YFDKINSSTVKKTALDDL HHHCCCCCHHHHHHCCCC >Mature Secondary Structure MKKILIMLTLLLPIYNSFSQTKDDTSKHLVFKGVPLDGTLEEYVLKMKQNGFDHLSTKDG CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCC VATLQGDFAGYKDCYVGVSTLNQKDLVHKIAVLFPEKDTWSTLYDNYINLKEMLTEKYGK CEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCC PSAVVEKFDNRSSEPKDDGTKMFDVKFDRCKYYSIWETDKGKIQLSIDHKSVTSCFVKLA CHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCEEEEEECHHHHHHHHHHHH YFDKINSSTVKKTALDDL HHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA