| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301372
Identifier: 146301372
GI number: 146301372
Start: 4325137
End: 4326963
Strand: Direct
Name: 146301372
Synonym: Fjoh_3630
Alternate gene names: NA
Gene position: 4325137-4326963 (Clockwise)
Preceding gene: 146301371
Following gene: 146301374
Centisome position: 70.94
GC content: 28.68
Gene sequence:
>1827_bases ATGGACAGTTCACATATCAAAGTAATATTTGAAGATTACTTAAAAACAGTTAATTCGAATTATGCTTTACTTATTAATGG TAGCTGGGGAAGCGGTAAAACTTATTTCTGGAAAGACTCTTTAAGTAAAATCTGTGACGAGAATAACTTCAAAACTTTAT ATATTTCATTAAATGGATTGAATAAAATAGAAACACTAGATTATCAGTTAAAGATTAAACTTATCCCTTTTCTAAATAAA TTAGATACAAAAAAGGCTGTCTCGACACTTAATCTCTTAAAAAATATAGGAGGAAAAATTATACAGAGTAAATACAATTT TAGTCCTGAAGAAATTTTAAAAGATGTTGAAGTTGACACTGCACTTTTTTCAAAGCAGGTAATATGCTTTGATGACCTTG AAAGATGTAATATTCCTTTAAGCGAAGTGCTGGGATATATCAATAATTTTGTTGAACATAAAAACTCGAAAGTTCTCATT CTATCTGATGAATCCAAAATACCGGATAGTGAGGATGTAAATAAATCCACGTATAACTCTATTAAAGAAAAAGTTATTGG CAGGGTATTAAATTTCAGTAATGATTTAAATTATATCTTCCCATTTTTTATTGAGAGATATAAAATTCCGGATCCTGAAT TCTCATCTTTCCTAGATCAGAATAAATCATATATACTTGAAATTTTAGCAGAGTTTAAAGAAGAAAATCTAAGGAATTTA TCTTTTTACCTTGAAGCTTTAAATAAATTATTTCCTGTTTTAAAATCAAATCTAGAATTTAAAAAAGAAATTATATTATT TACATTGATTATTACACTGGAGTTTAAAAAAGGTAATCTGAATTCCAGTAACTATAACAATTTTAATGATCTTGATTTAT TGAATCCAGCCTATGTGATGTTCAATTTCGACCCTTCATTTAGTTTACTTTCGAAAAAAGCTGAAAAAACTCAAAAAGAA GAAAGCGAACTGGAAAAATTCTATAACAGATATCTTTCCAATTATATACAGGATTACTTTTTTTATCCAGCTGTATACCA GTTCATACTCACAGGTTATTTGGATCTTGAAAAATTTAATAATGAACTTAAAAGCCGTATTCCTGTTGAGCCTACAATTG AAAATGCTACCTTCACAAATGTTGCAACAAATAAATTCAGACAGTTATCTAATGAGGAATTTAATGAAAATATTGAGCGG TTCTTACTTTTTGCAAAACAAGGCAAATATGAAATCTCAGATTATCTGCAGATTTCTAAATTTTTAAATTTCTATTCTGA AAATTTTATTATTAACCATACAAAAGATGAGATAAGGGAAATTCTGCTTGAAGGACTTCTTATTGCCAAAGAAGACTTTG TACCTATTAAGAGAACACGAAACTTTTCATTTGATATGGATCAAAATCCTGCTGATGATACAATCTTAAGAGATAAAATT ATTGAGTATATTAATGAAAGCGAGAAAGAATTTGAAAAAGAAAAAACGAATTCACTTTTAAATGCTATTGCACAGAATGA CTTGGAGAAGATGAAAGATGTATTTGATGAATATAACATAAACAAAGAGCTGTTTCAGAATTTCAGCGCCCAAAGTTTAT GGACGCACCTCCAAAGCTGTGAAAATAGAACTTTAGTCCAGTTTACGAGCCTGCTTAAACAGCGCCACGGTTTTTCAAAC ATAAAAACTTATTTTCTCGATAATACTGATCTTTTCAAGGATCTGATTCTCTGTATTAAAAATTCAGAAAGTACAGGAAA TCTTCAGAAAATGCTCAAAAAAGAATTAATAGTACAGCTCGAAGAAATTTGTGAAAGAATGGAGTAA
Upstream 100 bases:
>100_bases TAACAGATATTATAACACTTCTGAAAGAGTAAACAGTCATTTTTTGATGTTTGCTTCACATAATAACAAACGCATTTCTT AACAAAAAAATATTCAGTCT
Downstream 100 bases:
>100_bases TTCTTAAGCATCACATTAAGATTATTTCTCCTCAGTCATAGCTACTTTCCATTTTTCATTCTCATATGTTAGAAAAACTA TATTACTGAAAGTTTCACCA
Product: KAP P-loop domain-containing protein
Products: NA
Alternate protein names: KAP P-Loop Domain-Containing Protein; KAP Family P-Loop Domain Protein; Kap P-Loop Domain Protein; KAP P-Loop
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MDSSHIKVIFEDYLKTVNSNYALLINGSWGSGKTYFWKDSLSKICDENNFKTLYISLNGLNKIETLDYQLKIKLIPFLNK LDTKKAVSTLNLLKNIGGKIIQSKYNFSPEEILKDVEVDTALFSKQVICFDDLERCNIPLSEVLGYINNFVEHKNSKVLI LSDESKIPDSEDVNKSTYNSIKEKVIGRVLNFSNDLNYIFPFFIERYKIPDPEFSSFLDQNKSYILEILAEFKEENLRNL SFYLEALNKLFPVLKSNLEFKKEIILFTLIITLEFKKGNLNSSNYNNFNDLDLLNPAYVMFNFDPSFSLLSKKAEKTQKE ESELEKFYNRYLSNYIQDYFFYPAVYQFILTGYLDLEKFNNELKSRIPVEPTIENATFTNVATNKFRQLSNEEFNENIER FLLFAKQGKYEISDYLQISKFLNFYSENFIINHTKDEIREILLEGLLIAKEDFVPIKRTRNFSFDMDQNPADDTILRDKI IEYINESEKEFEKEKTNSLLNAIAQNDLEKMKDVFDEYNINKELFQNFSAQSLWTHLQSCENRTLVQFTSLLKQRHGFSN IKTYFLDNTDLFKDLILCIKNSESTGNLQKMLKKELIVQLEEICERME
Sequences:
>Translated_608_residues MDSSHIKVIFEDYLKTVNSNYALLINGSWGSGKTYFWKDSLSKICDENNFKTLYISLNGLNKIETLDYQLKIKLIPFLNK LDTKKAVSTLNLLKNIGGKIIQSKYNFSPEEILKDVEVDTALFSKQVICFDDLERCNIPLSEVLGYINNFVEHKNSKVLI LSDESKIPDSEDVNKSTYNSIKEKVIGRVLNFSNDLNYIFPFFIERYKIPDPEFSSFLDQNKSYILEILAEFKEENLRNL SFYLEALNKLFPVLKSNLEFKKEIILFTLIITLEFKKGNLNSSNYNNFNDLDLLNPAYVMFNFDPSFSLLSKKAEKTQKE ESELEKFYNRYLSNYIQDYFFYPAVYQFILTGYLDLEKFNNELKSRIPVEPTIENATFTNVATNKFRQLSNEEFNENIER FLLFAKQGKYEISDYLQISKFLNFYSENFIINHTKDEIREILLEGLLIAKEDFVPIKRTRNFSFDMDQNPADDTILRDKI IEYINESEKEFEKEKTNSLLNAIAQNDLEKMKDVFDEYNINKELFQNFSAQSLWTHLQSCENRTLVQFTSLLKQRHGFSN IKTYFLDNTDLFKDLILCIKNSESTGNLQKMLKKELIVQLEEICERME >Mature_608_residues MDSSHIKVIFEDYLKTVNSNYALLINGSWGSGKTYFWKDSLSKICDENNFKTLYISLNGLNKIETLDYQLKIKLIPFLNK LDTKKAVSTLNLLKNIGGKIIQSKYNFSPEEILKDVEVDTALFSKQVICFDDLERCNIPLSEVLGYINNFVEHKNSKVLI LSDESKIPDSEDVNKSTYNSIKEKVIGRVLNFSNDLNYIFPFFIERYKIPDPEFSSFLDQNKSYILEILAEFKEENLRNL SFYLEALNKLFPVLKSNLEFKKEIILFTLIITLEFKKGNLNSSNYNNFNDLDLLNPAYVMFNFDPSFSLLSKKAEKTQKE ESELEKFYNRYLSNYIQDYFFYPAVYQFILTGYLDLEKFNNELKSRIPVEPTIENATFTNVATNKFRQLSNEEFNENIER FLLFAKQGKYEISDYLQISKFLNFYSENFIINHTKDEIREILLEGLLIAKEDFVPIKRTRNFSFDMDQNPADDTILRDKI IEYINESEKEFEKEKTNSLLNAIAQNDLEKMKDVFDEYNINKELFQNFSAQSLWTHLQSCENRTLVQFTSLLKQRHGFSN IKTYFLDNTDLFKDLILCIKNSESTGNLQKMLKKELIVQLEEICERME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71521; Mature: 71521
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSHIKVIFEDYLKTVNSNYALLINGSWGSGKTYFWKDSLSKICDENNFKTLYISLNGL CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCEEEEEEECCC NKIETLDYQLKIKLIPFLNKLDTKKAVSTLNLLKNIGGKIIQSKYNFSPEEILKDVEVDT CCEEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHH ALFSKQVICFDDLERCNIPLSEVLGYINNFVEHKNSKVLILSDESKIPDSEDVNKSTYNS HHHHCCEEEHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH IKEKVIGRVLNFSNDLNYIFPFFIERYKIPDPEFSSFLDQNKSYILEILAEFKEENLRNL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH SFYLEALNKLFPVLKSNLEFKKEIILFTLIITLEFKKGNLNSSNYNNFNDLDLLNPAYVM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEE FNFDPSFSLLSKKAEKTQKEESELEKFYNRYLSNYIQDYFFYPAVYQFILTGYLDLEKFN EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELKSRIPVEPTIENATFTNVATNKFRQLSNEEFNENIERFLLFAKQGKYEISDYLQISK HHHHHCCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FLNFYSENFIINHTKDEIREILLEGLLIAKEDFVPIKRTRNFSFDMDQNPADDTILRDKI HHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH IEYINESEKEFEKEKTNSLLNAIAQNDLEKMKDVFDEYNINKELFQNFSAQSLWTHLQSC HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH ENRTLVQFTSLLKQRHGFSNIKTYFLDNTDLFKDLILCIKNSESTGNLQKMLKKELIVQL CCCHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEICERME HHHHHHCC >Mature Secondary Structure MDSSHIKVIFEDYLKTVNSNYALLINGSWGSGKTYFWKDSLSKICDENNFKTLYISLNGL CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCCCEEEEEEECCC NKIETLDYQLKIKLIPFLNKLDTKKAVSTLNLLKNIGGKIIQSKYNFSPEEILKDVEVDT CCEEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHH ALFSKQVICFDDLERCNIPLSEVLGYINNFVEHKNSKVLILSDESKIPDSEDVNKSTYNS HHHHCCEEEHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH IKEKVIGRVLNFSNDLNYIFPFFIERYKIPDPEFSSFLDQNKSYILEILAEFKEENLRNL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH SFYLEALNKLFPVLKSNLEFKKEIILFTLIITLEFKKGNLNSSNYNNFNDLDLLNPAYVM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEE FNFDPSFSLLSKKAEKTQKEESELEKFYNRYLSNYIQDYFFYPAVYQFILTGYLDLEKFN EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NELKSRIPVEPTIENATFTNVATNKFRQLSNEEFNENIERFLLFAKQGKYEISDYLQISK HHHHHCCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FLNFYSENFIINHTKDEIREILLEGLLIAKEDFVPIKRTRNFSFDMDQNPADDTILRDKI HHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH IEYINESEKEFEKEKTNSLLNAIAQNDLEKMKDVFDEYNINKELFQNFSAQSLWTHLQSC HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH ENRTLVQFTSLLKQRHGFSNIKTYFLDNTDLFKDLILCIKNSESTGNLQKMLKKELIVQL CCCHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEICERME HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA