| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301340
Identifier: 146301340
GI number: 146301340
Start: 4294715
End: 4295689
Strand: Direct
Name: 146301340
Synonym: Fjoh_3598
Alternate gene names: NA
Gene position: 4294715-4295689 (Clockwise)
Preceding gene: 146301339
Following gene: 146301341
Centisome position: 70.44
GC content: 39.49
Gene sequence:
>975_bases ATGAAAAACTTTACTTCTCTAATGTCACTTGTGTTTTTAATATTATCAAGTCCAGCTACATCACAAGTCGATTACAAATT AACAGGCGAGCTTCTTAAAGCAATAAAAGAACATAATGACGGATATGAGCAGCTGAACAAGCTATCTTCAATAATTAAAA AAATGGAAGAAACAGGTGAAAAACCCGAAACTGAACCAGATGACAACTGGCACGCTCTGGCTCAGAAATATAAAAATGCT GATGAAGACATAAAAGCGGCAAAACTTCCTACTGACTTTCCTGCCGATCGTTATAAAATTTCTTCAGAACAGTTCAATAA CTGCTTTAGCAAGAGCTCAAATTTGGATATCCTTACCCGTTATCAAACTGAACTTTCAAATGCATCTGCTGTCGGCGAGC AGGAATTAAAGACAATAGAGACCGAGAAGGAAAAAATTAAGAGTTCCTTTGCCGCGCTAAATTATCTCATCGACGGTTAT GCGCTATTCTCAACAGAGCCGATATATGGAAGCTTATTCACTTCAGATCTGTTCTCACTTCTCAATACCGTTAGACCTGC GCTGGGGGAGTACAGCGCTTCACTGAATAAGTACGAGAAAAAACTGCGAAAAGAGGTTGATGCCGCTAGGCTCCACAGCT CAAATCTGCAGAATAACATAAACACCCTCAGAGGCAGTTTCTGCTCCCTTGATGGTGTTTACAACGGCGAGGACAGACCA GCTGGAGCCAACTTTTCTTGGAAACATATGCTGAATTTAAAAAGAAGCGGCAGCTCTTACACCGGCAAATTTACAATGGT TAAGTCAAACGGCGCCAGCAAGAGAGAGTCTAATGTATCCGGTATCTCAATATCAGGGAATAATATAACATTCAATACAT CATGGGGCAAGTATACAGGCAGAATATCTACAAATTTTTCAGATATTACTATTTTAAGAGATCCTTATGGTGCAAGCTAT GTAATGTCAAAATAG
Upstream 100 bases:
>100_bases TAAAAAGAGTATTATATGTTTCAATCTTCCTCATCACTTTGAAAAACCTTTGTAAAACAACTGAATTTAACTGTTATCTA TTAACCACAAACATTTAAAT
Downstream 100 bases:
>100_bases GAAAGTAAGTTCGTTTCATGTATTGCGTGCTAACCCAAACATCAATAAGAATGTCAAATTTGGATTTAGGGCTGTATTGT CTTAACATGCGGGATTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKNFTSLMSLVFLILSSPATSQVDYKLTGELLKAIKEHNDGYEQLNKLSSIIKKMEETGEKPETEPDDNWHALAQKYKNA DEDIKAAKLPTDFPADRYKISSEQFNNCFSKSSNLDILTRYQTELSNASAVGEQELKTIETEKEKIKSSFAALNYLIDGY ALFSTEPIYGSLFTSDLFSLLNTVRPALGEYSASLNKYEKKLRKEVDAARLHSSNLQNNINTLRGSFCSLDGVYNGEDRP AGANFSWKHMLNLKRSGSSYTGKFTMVKSNGASKRESNVSGISISGNNITFNTSWGKYTGRISTNFSDITILRDPYGASY VMSK
Sequences:
>Translated_324_residues MKNFTSLMSLVFLILSSPATSQVDYKLTGELLKAIKEHNDGYEQLNKLSSIIKKMEETGEKPETEPDDNWHALAQKYKNA DEDIKAAKLPTDFPADRYKISSEQFNNCFSKSSNLDILTRYQTELSNASAVGEQELKTIETEKEKIKSSFAALNYLIDGY ALFSTEPIYGSLFTSDLFSLLNTVRPALGEYSASLNKYEKKLRKEVDAARLHSSNLQNNINTLRGSFCSLDGVYNGEDRP AGANFSWKHMLNLKRSGSSYTGKFTMVKSNGASKRESNVSGISISGNNITFNTSWGKYTGRISTNFSDITILRDPYGASY VMSK >Mature_324_residues MKNFTSLMSLVFLILSSPATSQVDYKLTGELLKAIKEHNDGYEQLNKLSSIIKKMEETGEKPETEPDDNWHALAQKYKNA DEDIKAAKLPTDFPADRYKISSEQFNNCFSKSSNLDILTRYQTELSNASAVGEQELKTIETEKEKIKSSFAALNYLIDGY ALFSTEPIYGSLFTSDLFSLLNTVRPALGEYSASLNKYEKKLRKEVDAARLHSSNLQNNINTLRGSFCSLDGVYNGEDRP AGANFSWKHMLNLKRSGSSYTGKFTMVKSNGASKRESNVSGISISGNNITFNTSWGKYTGRISTNFSDITILRDPYGASY VMSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36188; Mature: 36188
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFTSLMSLVFLILSSPATSQVDYKLTGELLKAIKEHNDGYEQLNKLSSIIKKMEETGE CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC KPETEPDDNWHALAQKYKNADEDIKAAKLPTDFPADRYKISSEQFNNCFSKSSNLDILTR CCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHEEECHHHHHHHHCCCCCCEEEEH YQTELSNASAVGEQELKTIETEKEKIKSSFAALNYLIDGYALFSTEPIYGSLFTSDLFSL HHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH LNTVRPALGEYSASLNKYEKKLRKEVDAARLHSSNLQNNINTLRGSFCSLDGVYNGEDRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC AGANFSWKHMLNLKRSGSSYTGKFTMVKSNGASKRESNVSGISISGNNITFNTSWGKYTG CCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCEEC RISTNFSDITILRDPYGASYVMSK EEECCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKNFTSLMSLVFLILSSPATSQVDYKLTGELLKAIKEHNDGYEQLNKLSSIIKKMEETGE CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC KPETEPDDNWHALAQKYKNADEDIKAAKLPTDFPADRYKISSEQFNNCFSKSSNLDILTR CCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHEEECHHHHHHHHCCCCCCEEEEH YQTELSNASAVGEQELKTIETEKEKIKSSFAALNYLIDGYALFSTEPIYGSLFTSDLFSL HHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH LNTVRPALGEYSASLNKYEKKLRKEVDAARLHSSNLQNNINTLRGSFCSLDGVYNGEDRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC AGANFSWKHMLNLKRSGSSYTGKFTMVKSNGASKRESNVSGISISGNNITFNTSWGKYTG CCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCEEC RISTNFSDITILRDPYGASYVMSK EEECCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA