| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301337
Identifier: 146301337
GI number: 146301337
Start: 4290792
End: 4292000
Strand: Direct
Name: 146301337
Synonym: Fjoh_3595
Alternate gene names: NA
Gene position: 4290792-4292000 (Clockwise)
Preceding gene: 146301336
Following gene: 146301338
Centisome position: 70.38
GC content: 34.08
Gene sequence:
>1209_bases ATGAGCGAATTATTCAGAAAATATCATCTAGGCCATTTTATAGGGGAATACAGAAATAATCTTTTCGAGCGAATAGACAA ATTGGAAATAACTGATAGCACTAATATTTCCGAACTTGCTGAAAGGCTAAAATCTGAATTCACCATTTTTCCAATTATTA TAGGTGAGCCAAAACCCTCACAGCCAATAGAAACAACAAAAAAAATGTACAATCCTTGGGGACAATTGTATAACCAGAAT GTTCTGGAGATTACGGTTACGATTCCATTTGAGGGAAACCATAAGTTATTTTACTGCATGCCTTCGCGATCCACGATAGT TTATCTTGAGGATAATGTTGTTATTGGCAATACTAATATCAAGGCAACAATCACGCTGACTCAGTTTGACGAGAAGGCTT ACTTTTCAGAAGTAAACGAAATTATCAGCACTGTAAGCACAAACTTACCCGCAATACACGATGAAATTAAACCTTGGAAT GACAGACTTGAAAATTTAATTCAGCAGGCCTTAGAAAGCAGAAAAGGAATTGTGTCAAAGAAGTTTGATTTTATGGAAAA AATTGGATTGAAAGTAAATCCAAATTCTACCGAATATTTAGTGCCGCCAACTATTACCAAAAAAGCAATTCCAACTCCAG TAACAGAAACAAGTAAAACAGTAGCAAAAGAAAAAGTTCCAATACTTCAAGAAGAAGTTTACATAGATATTAGAGAAGTT TTGTATAATGTCGGAAAAGCAATTGAACGAAAACCTTCATTATACAAGGATAAGTATGAAGAAGATTTGCGAGATATTTT CCTGCTGTTTCTTGAAACAAGATATGAAGCTGCTACAGGAGTTGGGGAAGCGTTCAATAAAAAAGGAAAGACAGACATCC TTCTAAAGTATGCAAAAGATGGAACTAATCTCTTTGTTGCGGAATGCAAGTATTGGAAAGGACAAAAAAAATTAACTGAA GGCATTGACCAATTATTAGGCTACTTGACACATAGAGACACTAAAACAGCATTGATATTTTTTGTCGACCAAAAAGAAAT AACAAGTGTTGTGAGCACAATAAAAAGTGAAATCAGCTGCCACAAAAATTACAGCAGACATATCAAGAACACATACGAAC ATTCTATTAACTATGAATTTACTCTACCCGACGATAGCGACAAAAAAATTCAGGTTGAATTAATGCTTTTTCATTTTCCG AAAATTTAA
Upstream 100 bases:
>100_bases ATTCACCTTCGGACTTAGAATGGACAAGTGCATTGAAAGAGATTATCTGCTGACCGGCTATAAGGGTCAGTGTAGAAAGA CAAAAAAGAAATAAAAAACA
Downstream 100 bases:
>100_bases CGAATAAAAAACGGTATAAATTATTAATCGGCAATACTTAAAACAGTTATGCATACACTATTCGACCATATTGAACGTGA TTTCCATGGATCATCTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSELFRKYHLGHFIGEYRNNLFERIDKLEITDSTNISELAERLKSEFTIFPIIIGEPKPSQPIETTKKMYNPWGQLYNQN VLEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNIKATITLTQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWN DRLENLIQQALESRKGIVSKKFDFMEKIGLKVNPNSTEYLVPPTITKKAIPTPVTETSKTVAKEKVPILQEEVYIDIREV LYNVGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKDGTNLFVAECKYWKGQKKLTE GIDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISCHKNYSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHFP KI
Sequences:
>Translated_402_residues MSELFRKYHLGHFIGEYRNNLFERIDKLEITDSTNISELAERLKSEFTIFPIIIGEPKPSQPIETTKKMYNPWGQLYNQN VLEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNIKATITLTQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWN DRLENLIQQALESRKGIVSKKFDFMEKIGLKVNPNSTEYLVPPTITKKAIPTPVTETSKTVAKEKVPILQEEVYIDIREV LYNVGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKDGTNLFVAECKYWKGQKKLTE GIDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISCHKNYSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHFP KI >Mature_401_residues SELFRKYHLGHFIGEYRNNLFERIDKLEITDSTNISELAERLKSEFTIFPIIIGEPKPSQPIETTKKMYNPWGQLYNQNV LEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNIKATITLTQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWND RLENLIQQALESRKGIVSKKFDFMEKIGLKVNPNSTEYLVPPTITKKAIPTPVTETSKTVAKEKVPILQEEVYIDIREVL YNVGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKDGTNLFVAECKYWKGQKKLTEG IDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISCHKNYSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHFPK I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46582; Mature: 46451
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELFRKYHLGHFIGEYRNNLFERIDKLEITDSTNISELAERLKSEFTIFPIIIGEPKPS CHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCC QPIETTKKMYNPWGQLYNQNVLEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNI CCHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCEEEEEECCEEEECCCE KATITLTQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWNDRLENLIQQALESRKGIVSK EEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH KFDFMEKIGLKVNPNSTEYLVPPTITKKAIPTPVTETSKTVAKEKVPILQEEVYIDIREV HHHHHHHCCCEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH LYNVGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECC GTNLFVAECKYWKGQKKLTEGIDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISC CCEEEEEECHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH HKNYSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHFPKI HHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEECCCC >Mature Secondary Structure SELFRKYHLGHFIGEYRNNLFERIDKLEITDSTNISELAERLKSEFTIFPIIIGEPKPS HHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCC QPIETTKKMYNPWGQLYNQNVLEITVTIPFEGNHKLFYCMPSRSTIVYLEDNVVIGNTNI CCHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCEEEEEECCEEEECCCE KATITLTQFDEKAYFSEVNEIISTVSTNLPAIHDEIKPWNDRLENLIQQALESRKGIVSK EEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH KFDFMEKIGLKVNPNSTEYLVPPTITKKAIPTPVTETSKTVAKEKVPILQEEVYIDIREV HHHHHHHCCCEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH LYNVGKAIERKPSLYKDKYEEDLRDIFLLFLETRYEAATGVGEAFNKKGKTDILLKYAKD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEECC GTNLFVAECKYWKGQKKLTEGIDQLLGYLTHRDTKTALIFFVDQKEITSVVSTIKSEISC CCEEEEEECHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH HKNYSRHIKNTYEHSINYEFTLPDDSDKKIQVELMLFHFPKI HHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA