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The map label for this gene is 146301295

Identifier: 146301295

GI number: 146301295

Start: 4240960

End: 4242636

Strand: Direct

Name: 146301295

Synonym: Fjoh_3553

Alternate gene names: NA

Gene position: 4240960-4242636 (Clockwise)

Preceding gene: 146301259

Following gene: 146301296

Centisome position: 69.56

GC content: 32.98

Gene sequence:

>1677_bases
ATGACTCAGCATCGCTATCTCTTTCTTCTTATTACCACTCAGTTAATTATATCCCAAGGAAATAATTTCAAGATACCTGA
TTCCTTAAGGAACAAGAACTATGAATATCTTGACGATAAAATTTACTTCTACAAAGGAGATAGCACAAAAGCTGCAATAT
ATATGTATACGTATCTCTATAAGGCAAAAAAAGAACAGAACTACACAGAAATTGTCAATGGCTATCAAAATATCCTTCAT
GAATCGCCAGAAAAACAAAGATTAATTTATGCTGACAGCATGATATTGGAAGCACAAAAATCAGGTATGAATACTTTACT
GGGTTCAGCCTATCTGTCCAAAGGGATTGTATATTATAGTAGAAAAGAGCTTCATGAGGCCTTAGACAATTACATAGAAG
CAAACAAATACATTTCCAAAACTTCGGACCAGTATTTAAAATATAAGGTTAAGTATAATATTGCCATTATTAAATCCTAT
TTAGGTTATTATGATGAAGCTATTGCCTTATTGACTGAGTGTGTGGATCATTTTAAGAATGAGGGGGCAAGACCCTATTT
AAATTCTCTTCATGCCCTGGGACTTGCCTACAATAAAATTGGAAATTATGGCAAATGCACCCAGACCAATCTTTTAGGAC
TATCCGAAAGCGAACGGCTGGGAAATAAGGACATGGTCCCCTATTTCATCCATTCCGAAGCAGTCAATCAATTTTTTAAG
GAAGATTACAATGATGCTATAAAAAATCTTAAATCAGTATCAGACCAGATCAAAAAAAATGAAGATTTTGCAAGTGAATC
TATAAGCTGTTTTTACATTGGCAAAAGTTACTGGAAATTAAAAAAGTATGAAAATGCCGTTTCTTATTTTTTAAAAGTAG
ATCAAATTTATAAAAGTCATGGCTATATCAGGCCTGATCTGCGTGAGGCTTATGAATTATTAATCAAATATTATAAAACG
AAGAACAACTTGGATTTACAACTATATTGTATTGATCAATTGCTTCTGGCAGATAACTACCTTAATGAAACCTATAAATA
TTTGGTAAGTAAACTGCACAAGGAATACGACACAAATGAGCTTATCTTTGAAAAAGAACAAATCCAGGAGCAGTTCATAA
AAAAGAAAAAACAAGTTTATGCATTCACAGGTTTGGCAGTTTCACTGCTCTTGCTATCATTGTTTTTGACCTTTAACCAC
TTTAGAAACAGGAGACTTTACAAAAAAAACTTTGATCAGTTAATGCTGCAGTTGAATACTGGTAAGGCTCCTAAAGATAA
ATTCAGATCATCTGGTGATAATCTGGCAGATATAAATCCTGAAACGGTTTCCTATATAATTAAACAGCTGGAAAAATTTG
AAAACGAAAAAAAATTCCTGCAGAAGGATTTAACTATCTCTAAATTGGCCGTAATGTTTAATTCAAATCAAACCTATGTA
TCAAGAATCATTCGTCATTACAGCGGAAAAGCATTCAAAGATTATATAAATGATCTGAAAATTGAACACATTATCGCCTT
GCTTCACAATAACAAAAAAATAAGAAAATATAATAATGTAGCGTTGGCAGAAGAAGCTGGTTTCGGCAGCAAACAGCTCT
TTGCGCAATTATTTAAAGCCAAAACAGGTATGCCGACAGCTTACTTTATCGAACAGCTTAAAACGGAAAGTCTGTGA

Upstream 100 bases:

>100_bases
ATGTAAATTTTATGTTACTTTTATGTTATGGAGACGTTAATAAGACTAGAATAGCGTTTGATTCTCCTTTTACGAAAGAT
TCGCCTCAAAAACATCAAAT

Downstream 100 bases:

>100_bases
TGTATAAACTGTAACAAATTTTTAAATTATATATTTGCCCGCGTAATTAAAAAAACAATTTATCATGAACGATCTTATTG
CAAAAATCAACGCAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MTQHRYLFLLITTQLIISQGNNFKIPDSLRNKNYEYLDDKIYFYKGDSTKAAIYMYTYLYKAKKEQNYTEIVNGYQNILH
ESPEKQRLIYADSMILEAQKSGMNTLLGSAYLSKGIVYYSRKELHEALDNYIEANKYISKTSDQYLKYKVKYNIAIIKSY
LGYYDEAIALLTECVDHFKNEGARPYLNSLHALGLAYNKIGNYGKCTQTNLLGLSESERLGNKDMVPYFIHSEAVNQFFK
EDYNDAIKNLKSVSDQIKKNEDFASESISCFYIGKSYWKLKKYENAVSYFLKVDQIYKSHGYIRPDLREAYELLIKYYKT
KNNLDLQLYCIDQLLLADNYLNETYKYLVSKLHKEYDTNELIFEKEQIQEQFIKKKKQVYAFTGLAVSLLLLSLFLTFNH
FRNRRLYKKNFDQLMLQLNTGKAPKDKFRSSGDNLADINPETVSYIIKQLEKFENEKKFLQKDLTISKLAVMFNSNQTYV
SRIIRHYSGKAFKDYINDLKIEHIIALLHNNKKIRKYNNVALAEEAGFGSKQLFAQLFKAKTGMPTAYFIEQLKTESL

Sequences:

>Translated_558_residues
MTQHRYLFLLITTQLIISQGNNFKIPDSLRNKNYEYLDDKIYFYKGDSTKAAIYMYTYLYKAKKEQNYTEIVNGYQNILH
ESPEKQRLIYADSMILEAQKSGMNTLLGSAYLSKGIVYYSRKELHEALDNYIEANKYISKTSDQYLKYKVKYNIAIIKSY
LGYYDEAIALLTECVDHFKNEGARPYLNSLHALGLAYNKIGNYGKCTQTNLLGLSESERLGNKDMVPYFIHSEAVNQFFK
EDYNDAIKNLKSVSDQIKKNEDFASESISCFYIGKSYWKLKKYENAVSYFLKVDQIYKSHGYIRPDLREAYELLIKYYKT
KNNLDLQLYCIDQLLLADNYLNETYKYLVSKLHKEYDTNELIFEKEQIQEQFIKKKKQVYAFTGLAVSLLLLSLFLTFNH
FRNRRLYKKNFDQLMLQLNTGKAPKDKFRSSGDNLADINPETVSYIIKQLEKFENEKKFLQKDLTISKLAVMFNSNQTYV
SRIIRHYSGKAFKDYINDLKIEHIIALLHNNKKIRKYNNVALAEEAGFGSKQLFAQLFKAKTGMPTAYFIEQLKTESL
>Mature_557_residues
TQHRYLFLLITTQLIISQGNNFKIPDSLRNKNYEYLDDKIYFYKGDSTKAAIYMYTYLYKAKKEQNYTEIVNGYQNILHE
SPEKQRLIYADSMILEAQKSGMNTLLGSAYLSKGIVYYSRKELHEALDNYIEANKYISKTSDQYLKYKVKYNIAIIKSYL
GYYDEAIALLTECVDHFKNEGARPYLNSLHALGLAYNKIGNYGKCTQTNLLGLSESERLGNKDMVPYFIHSEAVNQFFKE
DYNDAIKNLKSVSDQIKKNEDFASESISCFYIGKSYWKLKKYENAVSYFLKVDQIYKSHGYIRPDLREAYELLIKYYKTK
NNLDLQLYCIDQLLLADNYLNETYKYLVSKLHKEYDTNELIFEKEQIQEQFIKKKKQVYAFTGLAVSLLLLSLFLTFNHF
RNRRLYKKNFDQLMLQLNTGKAPKDKFRSSGDNLADINPETVSYIIKQLEKFENEKKFLQKDLTISKLAVMFNSNQTYVS
RIIRHYSGKAFKDYINDLKIEHIIALLHNNKKIRKYNNVALAEEAGFGSKQLFAQLFKAKTGMPTAYFIEQLKTESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65496; Mature: 65365

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50293 TPR_REGION ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHRYLFLLITTQLIISQGNNFKIPDSLRNKNYEYLDDKIYFYKGDSTKAAIYMYTYLY
CCCCCEEHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCEEEEEECCCCCCHHHHHHHHH
KAKKEQNYTEIVNGYQNILHESPEKQRLIYADSMILEAQKSGMNTLLGSAYLSKGIVYYS
HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
RKELHEALDNYIEANKYISKTSDQYLKYKVKYNIAIIKSYLGYYDEAIALLTECVDHFKN
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGARPYLNSLHALGLAYNKIGNYGKCTQTNLLGLSESERLGNKDMVPYFIHSEAVNQFFK
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
EDYNDAIKNLKSVSDQIKKNEDFASESISCFYIGKSYWKLKKYENAVSYFLKVDQIYKSH
HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
GYIRPDLREAYELLIKYYKTKNNLDLQLYCIDQLLLADNYLNETYKYLVSKLHKEYDTNE
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LIFEKEQIQEQFIKKKKQVYAFTGLAVSLLLLSLFLTFNHFRNRRLYKKNFDQLMLQLNT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECC
GKAPKDKFRSSGDNLADINPETVSYIIKQLEKFENEKKFLQKDLTISKLAVMFNSNQTYV
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH
SRIIRHYSGKAFKDYINDLKIEHIIALLHNNKKIRKYNNVALAEEAGFGSKQLFAQLFKA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEHHCCCCHHHHHHHHHHH
KTGMPTAYFIEQLKTESL
CCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TQHRYLFLLITTQLIISQGNNFKIPDSLRNKNYEYLDDKIYFYKGDSTKAAIYMYTYLY
CCCCEEHHHHHHHHHHHCCCCCCCCHHHHCCCCCEECCEEEEEECCCCCCHHHHHHHHH
KAKKEQNYTEIVNGYQNILHESPEKQRLIYADSMILEAQKSGMNTLLGSAYLSKGIVYYS
HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
RKELHEALDNYIEANKYISKTSDQYLKYKVKYNIAIIKSYLGYYDEAIALLTECVDHFKN
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGARPYLNSLHALGLAYNKIGNYGKCTQTNLLGLSESERLGNKDMVPYFIHSEAVNQFFK
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
EDYNDAIKNLKSVSDQIKKNEDFASESISCFYIGKSYWKLKKYENAVSYFLKVDQIYKSH
HHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
GYIRPDLREAYELLIKYYKTKNNLDLQLYCIDQLLLADNYLNETYKYLVSKLHKEYDTNE
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LIFEKEQIQEQFIKKKKQVYAFTGLAVSLLLLSLFLTFNHFRNRRLYKKNFDQLMLQLNT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECC
GKAPKDKFRSSGDNLADINPETVSYIIKQLEKFENEKKFLQKDLTISKLAVMFNSNQTYV
CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH
SRIIRHYSGKAFKDYINDLKIEHIIALLHNNKKIRKYNNVALAEEAGFGSKQLFAQLFKA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEHHCCCCHHHHHHHHHHH
KTGMPTAYFIEQLKTESL
CCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA