| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300883
Identifier: 146300883
GI number: 146300883
Start: 3727348
End: 3728043
Strand: Reverse
Name: 146300883
Synonym: Fjoh_3138
Alternate gene names: NA
Gene position: 3728043-3727348 (Counterclockwise)
Preceding gene: 146300884
Following gene: 146300882
Centisome position: 61.15
GC content: 35.49
Gene sequence:
>696_bases ATGAAAATCAGTAGTATGCAATTTTTTACACCTAAAATCATGAAAAAATTTTTACGCAATAATGGGCTTTCAATTTGTTT TTTGTTATTGTTTGCCGGCTCTTTTGCCGGACAGATTTTATTTGGATTTGCAGAACACAATAAAGATCTTTTAGAAGACG GTGCGCCGCAAATTACTCTATTTTCGTATTTCTCTACAGGACATTTTATAGAATCTACATTTGAAAATTGGGAAAGTGAA TTTTTGCAGATGGCTTTGTTAGTGGTACTGACCATTTTTTTGCAGCAGAAAGGTTCTTCAGAATCTAAAGATTTAGATAA AGAAGAAGAAGTAGACAGAGAACCATCTGCTAAAAGAAAAAATGTTCCATGGCCAGTTACAAAAGGAGGGTGGATATTAG CAGTTTATAAGCATTCTCTAAGTATTGCCTTGTTTTTATTGTTTTTTATTTCAATGGCCGCACATTTTTACGGCAGTTTA AAAGATGAAAATGAGCAGCTCGCATTAAAAGGTCTGCCTCTTGAAACTGCATCGGCATATATAGGAGATTCGCGGTTTTG GTTTGAGTCATTCCAGAACTGGCAGAGCGAATTTTTGTCGGTTTTTGCTATAGTCATTTTTTCCATTTATCTGAGACAGA TCGGTTCTTCACAGTCTAAACCTGTAGATGCTCCCCATATACAGACAGGAGAATAA
Upstream 100 bases:
>100_bases GAACCGGACTTGATAGAGAATGTTGTCACAGAATGGGAGGATGAAGAAGGGACAATTGTAAAAGGAAAATTTATGGAATC TCAGTTGCAGCCTGCGGAAG
Downstream 100 bases:
>100_bases TTTTACAAAAAAAATCCGATTATTGATTAAAGAATAAAGTGATGTTTTTTTTACAAGTTTTTTCTGAATTTAAAGAGTTT TGCTAATATTAATTGTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKISSMQFFTPKIMKKFLRNNGLSICFLLLFAGSFAGQILFGFAEHNKDLLEDGAPQITLFSYFSTGHFIESTFENWESE FLQMALLVVLTIFLQQKGSSESKDLDKEEEVDREPSAKRKNVPWPVTKGGWILAVYKHSLSIALFLLFFISMAAHFYGSL KDENEQLALKGLPLETASAYIGDSRFWFESFQNWQSEFLSVFAIVIFSIYLRQIGSSQSKPVDAPHIQTGE
Sequences:
>Translated_231_residues MKISSMQFFTPKIMKKFLRNNGLSICFLLLFAGSFAGQILFGFAEHNKDLLEDGAPQITLFSYFSTGHFIESTFENWESE FLQMALLVVLTIFLQQKGSSESKDLDKEEEVDREPSAKRKNVPWPVTKGGWILAVYKHSLSIALFLLFFISMAAHFYGSL KDENEQLALKGLPLETASAYIGDSRFWFESFQNWQSEFLSVFAIVIFSIYLRQIGSSQSKPVDAPHIQTGE >Mature_231_residues MKISSMQFFTPKIMKKFLRNNGLSICFLLLFAGSFAGQILFGFAEHNKDLLEDGAPQITLFSYFSTGHFIESTFENWESE FLQMALLVVLTIFLQQKGSSESKDLDKEEEVDREPSAKRKNVPWPVTKGGWILAVYKHSLSIALFLLFFISMAAHFYGSL KDENEQLALKGLPLETASAYIGDSRFWFESFQNWQSEFLSVFAIVIFSIYLRQIGSSQSKPVDAPHIQTGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26283; Mature: 26283
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISSMQFFTPKIMKKFLRNNGLSICFLLLFAGSFAGQILFGFAEHNKDLLEDGAPQITL CCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEE FSYFSTGHFIESTFENWESEFLQMALLVVLTIFLQQKGSSESKDLDKEEEVDREPSAKRK EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC NVPWPVTKGGWILAVYKHSLSIALFLLFFISMAAHFYGSLKDENEQLALKGLPLETASAY CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHH IGDSRFWFESFQNWQSEFLSVFAIVIFSIYLRQIGSSQSKPVDAPHIQTGE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKISSMQFFTPKIMKKFLRNNGLSICFLLLFAGSFAGQILFGFAEHNKDLLEDGAPQITL CCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEE FSYFSTGHFIESTFENWESEFLQMALLVVLTIFLQQKGSSESKDLDKEEEVDREPSAKRK EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC NVPWPVTKGGWILAVYKHSLSIALFLLFFISMAAHFYGSLKDENEQLALKGLPLETASAY CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHH IGDSRFWFESFQNWQSEFLSVFAIVIFSIYLRQIGSSQSKPVDAPHIQTGE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA