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The map label for this gene is ydhS [H]

Identifier: 146300875

GI number: 146300875

Start: 3719656

End: 3721374

Strand: Reverse

Name: ydhS [H]

Synonym: Fjoh_3130

Alternate gene names: 146300875

Gene position: 3721374-3719656 (Counterclockwise)

Preceding gene: 146300878

Following gene: 146300874

Centisome position: 61.04

GC content: 37.29

Gene sequence:

>1719_bases
ATGACCGCCAACAATAAAAAACGTATTGCAATTATAGGAGGAGGTCCAAGCGGACTTTTTGTATATAAAAGATTGGTTGA
ATCTGGAAAGAATAATTTTGAAGTAGAAATCTTTGAACGTAAAGCACAACTTGGTTCAGGAATGCCATACAGCAGTGAAG
GTGCAAACAATGAACATATTACCAATGTTTCCGGTAATGAGGTTCCGGATATTGTAATTCCAATGTCTGAATGGGTTCAC
ATTGCGCCTCCGGAACTTCTTGAAAGATTTAAAATTAATCCGCATAAATTTAACGATTACAAAGTATTTCCCCGATTGTT
TTTTGGGGAATATCTTGCTGCACAATTTGAAATGCTGATCGAGGCAGGATCTAAAGCCGGAATCAGTTCAGAAATACATT
TTCAAAGTGTAGTAACTGATATTAAGTATGATACAAAAAGCAGTACAGTAGAGATTCAAACCGAAGCAGGGCAGACAAAA
GTATTTGATTCAGCTGTTATCTGCACAGGACATAACTGGCCGAGAACTCATGAAGGAAAAATTCCGGGTTATTACGATGC
TCCTTATCCTCCGCAAAAACTAGTGCAGAAGTTTAATCATACTGTGGCAGTTAAAGGCTCTTCTTTGACAGCGATAGATG
CAGTGAGGACTATTGCAAGAAACAATGGTTCATTTGAATCAGACAAAGACGGGAACTTACTTTTTACTTTATTCCCTGAA
AGCAGCGAATTTAAAATTATGATGCACTCGAAAAACGGTATGCTTCCTGCTGTACGATTCCATCTGGAAGATTCGCGTCT
TTTCAATGATTCTTTATTAACCACTGATGAAATAGAAGATCACAGAAAAAATAATAATGGTTTTTTGTCGCTGGATTTTG
TATTTGAAAAGAATTTTAAAGAGATATTCCGTGACAGGGATTATGATTTTTATGAACGCATCAAAGATTTATCAATTGAA
GATTTTGTTGAAGAAATGATGAAACTCCGCGAGCGTTTGGATCCCTTCCTGCTTTTAAGGGCTGAATATGCCGAGGCAGA
AAAATCAATTAAGAGACAGGAATCGATTTATTGGAAAGAGATGATTGGTGTGCTTAGTTTCGCCATGAACCATCCTGCAA
AATATCTTTCAGCAGAAGACATGCAGCGGCTGCAGAAAGTCCTCATGCCGCTTATTTCAATTGTAATTGCTTTTATTCCG
CAGAAATCCTGTGAAGAACTCCTCGCTCTTCATCATGCAGGTGTGCTTGATCTAATTTCTGTAGGTTCTGACAGTACAAT
AGAACCCCAGCTTAACGGCGGAATAGTATATCACTTCAGTGATGATGATCAGAAAAAGCATTCAGTTTATTATAAAACAT
TTATTGACTGTGTAGGCCAGCCTCACCTTGAATACAATAATTTTCCTTTTAAATCACTGTTGTCACAAAAAGCCGTAAGT
CCTGCACGTTTAAAATTTAAATCGAACCAAGCCGGTCATGCAGCCTTTATACTCAATGAGAATTTAGTAAAAAAAGATGA
GGCTGGTGACTATTTTATGAATGTTTCAGGCATAGCCATAAATGACAATTTTCAAGTTATTGATCAGTACGGAGCCTATA
ATAAAAACCTGTACATTATGGCGGTGCCGTACATAGGCGGACTTAATCCTGATTATTCTGGCTTAGATTTTTGTGAAGCA
GCTTCAATGCAGATTATTCAGAATTTTTTGCAGGATTAA

Upstream 100 bases:

>100_bases
ATCAGGTGTCAAACACATCATAAAAAATAGAAATACTGCTGTTAGATATCAGTGGTTTTTACTTGAAGATAATAATCCGA
ACCTTAAAAATGTAAATTCA

Downstream 100 bases:

>100_bases
TTAATTTCTAATCTTTTCTTGATTTAAAAATCAACACTGCAACTGATTTGCTGTAATCAAACAATTAGACATGAAAAACA
TAAAATCAAAGAAATCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MTANNKKRIAIIGGGPSGLFVYKRLVESGKNNFEVEIFERKAQLGSGMPYSSEGANNEHITNVSGNEVPDIVIPMSEWVH
IAPPELLERFKINPHKFNDYKVFPRLFFGEYLAAQFEMLIEAGSKAGISSEIHFQSVVTDIKYDTKSSTVEIQTEAGQTK
VFDSAVICTGHNWPRTHEGKIPGYYDAPYPPQKLVQKFNHTVAVKGSSLTAIDAVRTIARNNGSFESDKDGNLLFTLFPE
SSEFKIMMHSKNGMLPAVRFHLEDSRLFNDSLLTTDEIEDHRKNNNGFLSLDFVFEKNFKEIFRDRDYDFYERIKDLSIE
DFVEEMMKLRERLDPFLLLRAEYAEAEKSIKRQESIYWKEMIGVLSFAMNHPAKYLSAEDMQRLQKVLMPLISIVIAFIP
QKSCEELLALHHAGVLDLISVGSDSTIEPQLNGGIVYHFSDDDQKKHSVYYKTFIDCVGQPHLEYNNFPFKSLLSQKAVS
PARLKFKSNQAGHAAFILNENLVKKDEAGDYFMNVSGIAINDNFQVIDQYGAYNKNLYIMAVPYIGGLNPDYSGLDFCEA
ASMQIIQNFLQD

Sequences:

>Translated_572_residues
MTANNKKRIAIIGGGPSGLFVYKRLVESGKNNFEVEIFERKAQLGSGMPYSSEGANNEHITNVSGNEVPDIVIPMSEWVH
IAPPELLERFKINPHKFNDYKVFPRLFFGEYLAAQFEMLIEAGSKAGISSEIHFQSVVTDIKYDTKSSTVEIQTEAGQTK
VFDSAVICTGHNWPRTHEGKIPGYYDAPYPPQKLVQKFNHTVAVKGSSLTAIDAVRTIARNNGSFESDKDGNLLFTLFPE
SSEFKIMMHSKNGMLPAVRFHLEDSRLFNDSLLTTDEIEDHRKNNNGFLSLDFVFEKNFKEIFRDRDYDFYERIKDLSIE
DFVEEMMKLRERLDPFLLLRAEYAEAEKSIKRQESIYWKEMIGVLSFAMNHPAKYLSAEDMQRLQKVLMPLISIVIAFIP
QKSCEELLALHHAGVLDLISVGSDSTIEPQLNGGIVYHFSDDDQKKHSVYYKTFIDCVGQPHLEYNNFPFKSLLSQKAVS
PARLKFKSNQAGHAAFILNENLVKKDEAGDYFMNVSGIAINDNFQVIDQYGAYNKNLYIMAVPYIGGLNPDYSGLDFCEA
ASMQIIQNFLQD
>Mature_571_residues
TANNKKRIAIIGGGPSGLFVYKRLVESGKNNFEVEIFERKAQLGSGMPYSSEGANNEHITNVSGNEVPDIVIPMSEWVHI
APPELLERFKINPHKFNDYKVFPRLFFGEYLAAQFEMLIEAGSKAGISSEIHFQSVVTDIKYDTKSSTVEIQTEAGQTKV
FDSAVICTGHNWPRTHEGKIPGYYDAPYPPQKLVQKFNHTVAVKGSSLTAIDAVRTIARNNGSFESDKDGNLLFTLFPES
SEFKIMMHSKNGMLPAVRFHLEDSRLFNDSLLTTDEIEDHRKNNNGFLSLDFVFEKNFKEIFRDRDYDFYERIKDLSIED
FVEEMMKLRERLDPFLLLRAEYAEAEKSIKRQESIYWKEMIGVLSFAMNHPAKYLSAEDMQRLQKVLMPLISIVIAFIPQ
KSCEELLALHHAGVLDLISVGSDSTIEPQLNGGIVYHFSDDDQKKHSVYYKTFIDCVGQPHLEYNNFPFKSLLSQKAVSP
ARLKFKSNQAGHAAFILNENLVKKDEAGDYFMNVSGIAINDNFQVIDQYGAYNKNLYIMAVPYIGGLNPDYSGLDFCEAA
SMQIIQNFLQD

Specific function: Unknown

COG id: COG4529

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787957, Length=475, Percent_Identity=27.5789473684211, Blast_Score=186, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64970; Mature: 64838

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANNKKRIAIIGGGPSGLFVYKRLVESGKNNFEVEIFERKAQLGSGMPYSSEGANNEHI
CCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEE
TNVSGNEVPDIVIPMSEWVHIAPPELLERFKINPHKFNDYKVFPRLFFGEYLAAQFEMLI
ECCCCCCCCEEEEECCCCEECCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
EAGSKAGISSEIHFQSVVTDIKYDTKSSTVEIQTEAGQTKVFDSAVICTGHNWPRTHEGK
HCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCCCC
IPGYYDAPYPPQKLVQKFNHTVAVKGSSLTAIDAVRTIARNNGSFESDKDGNLLFTLFPE
CCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
SSEFKIMMHSKNGMLPAVRFHLEDSRLFNDSLLTTDEIEDHRKNNNGFLSLDFVFEKNFK
CCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEHHHHH
EIFRDRDYDFYERIKDLSIEDFVEEMMKLRERLDPFLLLRAEYAEAEKSIKRQESIYWKE
HHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH
MIGVLSFAMNHPAKYLSAEDMQRLQKVLMPLISIVIAFIPQKSCEELLALHHAGVLDLIS
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHC
VGSDSTIEPQLNGGIVYHFSDDDQKKHSVYYKTFIDCVGQPHLEYNNFPFKSLLSQKAVS
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
PARLKFKSNQAGHAAFILNENLVKKDEAGDYFMNVSGIAINDNFQVIDQYGAYNKNLYIM
CCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCCCCEEEE
AVPYIGGLNPDYSGLDFCEAASMQIIQNFLQD
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TANNKKRIAIIGGGPSGLFVYKRLVESGKNNFEVEIFERKAQLGSGMPYSSEGANNEHI
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEE
TNVSGNEVPDIVIPMSEWVHIAPPELLERFKINPHKFNDYKVFPRLFFGEYLAAQFEMLI
ECCCCCCCCEEEEECCCCEECCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
EAGSKAGISSEIHFQSVVTDIKYDTKSSTVEIQTEAGQTKVFDSAVICTGHNWPRTHEGK
HCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCEEEEECCCCCCCCCCC
IPGYYDAPYPPQKLVQKFNHTVAVKGSSLTAIDAVRTIARNNGSFESDKDGNLLFTLFPE
CCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
SSEFKIMMHSKNGMLPAVRFHLEDSRLFNDSLLTTDEIEDHRKNNNGFLSLDFVFEKNFK
CCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEHHHHH
EIFRDRDYDFYERIKDLSIEDFVEEMMKLRERLDPFLLLRAEYAEAEKSIKRQESIYWKE
HHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH
MIGVLSFAMNHPAKYLSAEDMQRLQKVLMPLISIVIAFIPQKSCEELLALHHAGVLDLIS
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHC
VGSDSTIEPQLNGGIVYHFSDDDQKKHSVYYKTFIDCVGQPHLEYNNFPFKSLLSQKAVS
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
PARLKFKSNQAGHAAFILNENLVKKDEAGDYFMNVSGIAINDNFQVIDQYGAYNKNLYIM
CCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCCCCCEEEE
AVPYIGGLNPDYSGLDFCEAASMQIIQNFLQD
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503 [H]