| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is cusB [H]
Identifier: 146300817
GI number: 146300817
Start: 3640520
End: 3641734
Strand: Direct
Name: cusB [H]
Synonym: Fjoh_3072
Alternate gene names: 146300817
Gene position: 3640520-3641734 (Clockwise)
Preceding gene: 146300816
Following gene: 146300818
Centisome position: 59.71
GC content: 40.0
Gene sequence:
>1215_bases ATGAACAATAAATTAATAATTCGTACTATTTTGCTCATTGCAATGGTTTTTCCACTTCTATTTACAGCATGTGCCCAAAA AGAAGAAAAAAAAACCAGTCAGGAAAAAGCTCAAACCTATACCTGCCCCATGCATCCGCAAATTGTAAAAGATGGCCCCG GCTCATGCCCGATCTGTGGAATGGATTTAGTGCCTTTCGAAAAAAACAACGCACAGGACTTTCTAACCTTGGGACCGAGC CAGCAGGCACTAGCTAATCTGACTACAATAACTGCTGGGGAAAATGAATTTTCAAATTCTTCTCATCTTAACGGACGTTT GGTTACTGACCCTGAGCAAACTATTTACATTTCAAGTCGCGTGGCAGGAAGGATTGAAGAGTTGTATGTAAAAGAAACTG GTGTTCCCGTTCGAAAAGGCCAGCCTTTGTACAAAATATATTCAGAGCAGCTTTCAGCCCTGCAGCAGGAGTACCTTCTA GCTACGGCACAGGCTGCAAGCTTTACTGAGGATAAACGATTTGCCCAAATAAAAAATGCTGCAAAACAAAAACTATTATT ATATGGACAATCTGAAGCACAGCTTAATGAATTATTAAAAAAACAAAAAGCTTCTCCTTATGTTGTTTATTATGCCCCGT ATTCAGGAATAGTTGCAGAACTTTCCATAACAGAAGGCCAATATGTAGCAGAAGGAGGCTCTATTATGAAACTGGAAGAT TATACCCGTTTATGGGTCGAAGCTGATGTCTATCCTGCAGATGCCGGTAAAGTTAAAATAGGCCAAAAAGTAAAAGTTAT TGTCTCGGGTTATGAAGATCAGCCCCAAACAATGACGGTAGATTTTATAAATCCTGCCCTGCAGACAAGCAAACAGCTCA TACAGCTGCGAGGTGCTATTGCCAATCCAAACAAGCAATGGCAGGCAGGTCAACAGGCAATTGTTTTACTGCCTTCATCA GAACAAAAAATGAAATTAACCATACCTGTAGATGCCGTAATAAGAGACGGCAGCGGTACACATGTGTGGATTGAAATTGA AAAAGGCAAGTATCAGCCTAAAATGGTGGCTATTGGTTCTGAAACCTTCGATGAAGTGGAAATTACTAGCGGTTTAAAAA AAGGAGATATCGTCGTTGCATCCGGTGCCTATCTTTTGTACAGTGAATTTATATTAAAGAAAGGCAAAAACCCTATGTCA GGAATGAAAATGTAA
Upstream 100 bases:
>100_bases AGACATCAGTAATTGGAATATCGCCAGTAATGCGGCTTATATGATAGACAGTGAGAGTTTTATCAAGACAGCTTCAGAAA ATAAATTAAAAAATTAAGCC
Downstream 100 bases:
>100_bases TAATCAATCACACAGACAATGAAAAAATTAATCAAAATCGGAATTCCAATAGCCTCACTCTTCCTGCTTATTGCGTGCGG TAACGGTGAAAACAATAAGA
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNNKLIIRTILLIAMVFPLLFTACAQKEEKKTSQEKAQTYTCPMHPQIVKDGPGSCPICGMDLVPFEKNNAQDFLTLGPS QQALANLTTITAGENEFSNSSHLNGRLVTDPEQTIYISSRVAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLL ATAQAASFTEDKRFAQIKNAAKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELSITEGQYVAEGGSIMKLED YTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQTMTVDFINPALQTSKQLIQLRGAIANPNKQWQAGQQAIVLLPSS EQKMKLTIPVDAVIRDGSGTHVWIEIEKGKYQPKMVAIGSETFDEVEITSGLKKGDIVVASGAYLLYSEFILKKGKNPMS GMKM
Sequences:
>Translated_404_residues MNNKLIIRTILLIAMVFPLLFTACAQKEEKKTSQEKAQTYTCPMHPQIVKDGPGSCPICGMDLVPFEKNNAQDFLTLGPS QQALANLTTITAGENEFSNSSHLNGRLVTDPEQTIYISSRVAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLL ATAQAASFTEDKRFAQIKNAAKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELSITEGQYVAEGGSIMKLED YTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQTMTVDFINPALQTSKQLIQLRGAIANPNKQWQAGQQAIVLLPSS EQKMKLTIPVDAVIRDGSGTHVWIEIEKGKYQPKMVAIGSETFDEVEITSGLKKGDIVVASGAYLLYSEFILKKGKNPMS GMKM >Mature_404_residues MNNKLIIRTILLIAMVFPLLFTACAQKEEKKTSQEKAQTYTCPMHPQIVKDGPGSCPICGMDLVPFEKNNAQDFLTLGPS QQALANLTTITAGENEFSNSSHLNGRLVTDPEQTIYISSRVAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLL ATAQAASFTEDKRFAQIKNAAKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELSITEGQYVAEGGSIMKLED YTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQTMTVDFINPALQTSKQLIQLRGAIANPNKQWQAGQQAIVLLPSS EQKMKLTIPVDAVIRDGSGTHVWIEIEKGKYQPKMVAIGSETFDEVEITSGLKKGDIVVASGAYLLYSEFILKKGKNPMS GMKM
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=393, Percent_Identity=26.972010178117, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44632; Mature: 44632
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKLIIRTILLIAMVFPLLFTACAQKEEKKTSQEKAQTYTCPMHPQIVKDGPGSCPICG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEC MDLVPFEKNNAQDFLTLGPSQQALANLTTITAGENEFSNSSHLNGRLVTDPEQTIYISSR CCCCCCCCCCCCCEEEECCCHHHHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEHH VAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLLATAQAASFTEDKRFAQIKNA HHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELSITEGQYVAEGGSIMKLED HHHEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEC YTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQTMTVDFINPALQTSKQLIQLRGAI CEEEEEEEEEEECCCCCEEECCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCC ANPNKQWQAGQQAIVLLPSSEQKMKLTIPVDAVIRDGSGTHVWIEIEKGKYQPKMVAIGS CCCCHHHCCCCEEEEEEECCCCCEEEEEEHEEEEECCCCCEEEEEEECCCCCCEEEEECC ETFDEVEITSGLKKGDIVVASGAYLLYSEFILKKGKNPMSGMKM CCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNNKLIIRTILLIAMVFPLLFTACAQKEEKKTSQEKAQTYTCPMHPQIVKDGPGSCPICG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEC MDLVPFEKNNAQDFLTLGPSQQALANLTTITAGENEFSNSSHLNGRLVTDPEQTIYISSR CCCCCCCCCCCCCEEEECCCHHHHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEHH VAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLLATAQAASFTEDKRFAQIKNA HHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELSITEGQYVAEGGSIMKLED HHHEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEC YTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQTMTVDFINPALQTSKQLIQLRGAI CEEEEEEEEEEECCCCCEEECCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCC ANPNKQWQAGQQAIVLLPSSEQKMKLTIPVDAVIRDGSGTHVWIEIEKGKYQPKMVAIGS CCCCHHHCCCCEEEEEEECCCCCEEEEEEHEEEEECCCCCEEEEEEECCCCCCEEEEECC ETFDEVEITSGLKKGDIVVASGAYLLYSEFILKKGKNPMSGMKM CCCCHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]