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The map label for this gene is ylcD [C]

Identifier: 146300816

GI number: 146300816

Start: 3639176

End: 3640516

Strand: Direct

Name: ylcD [C]

Synonym: Fjoh_3071

Alternate gene names: 146300816

Gene position: 3639176-3640516 (Clockwise)

Preceding gene: 146300815

Following gene: 146300817

Centisome position: 59.69

GC content: 41.76

Gene sequence:

>1341_bases
ATGAAAAAGAACTCTATCGCTAAGTTAGTCGGATTGTTATTCGTTTCGATATTATTATTGACAGCCTGTAACAAGAAAAC
CGAGCCTAACAATAAGCCAGCACACCAGCATAGTACAAATCAGGAATATACCTGTCCAATGCATCCCGAAGTTATCCAGG
ATAAGCCCGGCAGCTGTCCAATATGCGGGATGGAATTGGTCCCAAGGCATACCGCTGGAACGGAAACAGCCATAGACAGC
AGCTTAAAACACCTGCTAAAACCAGTTAACGAACAAGTCGTTTCAAATATATCTGTCATAAAAGCTGACCAGAGTACTAA
AATATTCTCCATGCATGTACAGGGAATTATTACCTACGATACCCGTGACCAGACCAGCATTTCCAGCAGGGTAAGCGGAA
GGATTGAGCGTCTGCTGATTAATTATAATTACCAGCCCGTAAAAAAAGGACAGTTGATCATGGAAATCTATTCCCCTGAT
CTGGCTGCCGCGCAAAGAGAGTTGTTGTTTATTTATCAATCTGACCCAAACAATCCGATGCTTCAAAAAGCAAAAGACAG
ACTGTCTCTCCTGGGTATGCAGCAGGGGCAAATTCAACAGGTATTAAAAACAGGTAAAATCTCCTATCGCATTCCTGTTT
ACAGTAATGCCACCGGGTACATCTTAGACAACACGGCAGCGGCAAATGCTTCTACAGCAGCTCCTGCGGCTTCGCCTCAA
AGCGCACCGTCAGATGATGGCATGGGCGCAATGGGTTCAAGTAGCAGTGCAGCATCAAATAGCAGCGCATCTACCCCTAC
TTCCTCTGCTATTATGCTAAGAGAAGGACAATATGTTGGTGCAGGACAATCTCTTTTTACAATTTATACCAACAAAAACC
TTATCGCTGAGTTTGCTTTTGATCCATCGGTATCATCCCAGATTAAAAAAGGACAAAAGTTGGTGTTTTATGAACCCTCA
GATAAGCAAACCGTGTATACTGGTACTATCGGACTCATTCAACCCGTCTTTAAAGAGGGAAGCAACTTTACCATAGCACG
GATTTATTTGCAGGATAATAAATTTCAGACCGGAAAATTAGTAACTGCAGCCATTCCTATTGTCAGTAAAGGCTGGTGGC
TTCCGCAAAGCGCCGTTCTTAATTTAGGAAATAAATCCATCGTTTTCAAAAAAGAGCAGGACGTGTTTGTTCCCAGAGAA
GTTAAAACGAAAAATAATGGTGATGGAATGGTGCTAATAGACCAAGACATCAGTAATTGGAATATCGCCAGTAATGCGGC
TTATATGATAGACAGTGAGAGTTTTATCAAGACAGCTTCAGAAAATAAATTAAAAAATTAA

Upstream 100 bases:

>100_bases
CTGCAGATTCCTGTAGTAATTGACTCCTGGGAAGCTTTAAATATGCTGCAGAATAACTTATTAGATGAAAAATTAAAACT
ATATCAAATGATTGTCGATT

Downstream 100 bases:

>100_bases
GCCATGAACAATAAATTAATAATTCGTACTATTTTGCTCATTGCAATGGTTTTTCCACTTCTATTTACAGCATGTGCCCA
AAAAGAAGAAAAAAAAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Metal Transport-Related Exported Protein; Cation Efflux System Transmembrane Protein; Heavy Metal Efflux System Protein; Cation Efflux System Protein CusB; HlyD Family Secretion Protein; Membrane-Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; H+-Transporting Two-Sector ATPase Delta Subunit; Component Of Copper Transport System; Cation Efflux System Protein; Heavy Metal Efflux Pump Membrane Fusion Protein; Heavy Metal Efflux Protein; Silver Efflux Protein; Membrane-Fusion Protein-Like; Copper/Silver Resistance Periplasmic Protein; Copper/Silver Efflux System Protein CusB; Copper/Silver Efflux System Membrane Fusion Protein; Efflux System Protein; Copper/Silver Efflux System Protein Cusb; Membrane-Fusion Protein RND-Like Efflux System Component; Cobalt-Zinc-Cadmium Resistance Membrane-Fusion Protein; Fis Family Transcriptional Regulator; Membrane-Fusion Protein-Like Protein; Copper Efflux System Protein; Co/Zn/Cd Efflux System Membrane Fusion Protein

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKKNSIAKLVGLLFVSILLLTACNKKTEPNNKPAHQHSTNQEYTCPMHPEVIQDKPGSCPICGMELVPRHTAGTETAIDS
SLKHLLKPVNEQVVSNISVIKADQSTKIFSMHVQGIITYDTRDQTSISSRVSGRIERLLINYNYQPVKKGQLIMEIYSPD
LAAAQRELLFIYQSDPNNPMLQKAKDRLSLLGMQQGQIQQVLKTGKISYRIPVYSNATGYILDNTAAANASTAAPAASPQ
SAPSDDGMGAMGSSSSAASNSSASTPTSSAIMLREGQYVGAGQSLFTIYTNKNLIAEFAFDPSVSSQIKKGQKLVFYEPS
DKQTVYTGTIGLIQPVFKEGSNFTIARIYLQDNKFQTGKLVTAAIPIVSKGWWLPQSAVLNLGNKSIVFKKEQDVFVPRE
VKTKNNGDGMVLIDQDISNWNIASNAAYMIDSESFIKTASENKLKN

Sequences:

>Translated_446_residues
MKKNSIAKLVGLLFVSILLLTACNKKTEPNNKPAHQHSTNQEYTCPMHPEVIQDKPGSCPICGMELVPRHTAGTETAIDS
SLKHLLKPVNEQVVSNISVIKADQSTKIFSMHVQGIITYDTRDQTSISSRVSGRIERLLINYNYQPVKKGQLIMEIYSPD
LAAAQRELLFIYQSDPNNPMLQKAKDRLSLLGMQQGQIQQVLKTGKISYRIPVYSNATGYILDNTAAANASTAAPAASPQ
SAPSDDGMGAMGSSSSAASNSSASTPTSSAIMLREGQYVGAGQSLFTIYTNKNLIAEFAFDPSVSSQIKKGQKLVFYEPS
DKQTVYTGTIGLIQPVFKEGSNFTIARIYLQDNKFQTGKLVTAAIPIVSKGWWLPQSAVLNLGNKSIVFKKEQDVFVPRE
VKTKNNGDGMVLIDQDISNWNIASNAAYMIDSESFIKTASENKLKN
>Mature_446_residues
MKKNSIAKLVGLLFVSILLLTACNKKTEPNNKPAHQHSTNQEYTCPMHPEVIQDKPGSCPICGMELVPRHTAGTETAIDS
SLKHLLKPVNEQVVSNISVIKADQSTKIFSMHVQGIITYDTRDQTSISSRVSGRIERLLINYNYQPVKKGQLIMEIYSPD
LAAAQRELLFIYQSDPNNPMLQKAKDRLSLLGMQQGQIQQVLKTGKISYRIPVYSNATGYILDNTAAANASTAAPAASPQ
SAPSDDGMGAMGSSSSAASNSSASTPTSSAIMLREGQYVGAGQSLFTIYTNKNLIAEFAFDPSVSSQIKKGQKLVFYEPS
DKQTVYTGTIGLIQPVFKEGSNFTIARIYLQDNKFQTGKLVTAAIPIVSKGWWLPQSAVLNLGNKSIVFKKEQDVFVPRE
VKTKNNGDGMVLIDQDISNWNIASNAAYMIDSESFIKTASENKLKN

Specific function: Possible component of copper transport system [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786787, Length=455, Percent_Identity=22.8571428571429, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48713; Mature: 48713

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNSIAKLVGLLFVSILLLTACNKKTEPNNKPAHQHSTNQEYTCPMHPEVIQDKPGSCP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCC
ICGMELVPRHTAGTETAIDSSLKHLLKPVNEQVVSNISVIKADQSTKIFSMHVQGIITYD
EECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEC
TRDQTSISSRVSGRIERLLINYNYQPVKKGQLIMEIYSPDLAAAQRELLFIYQSDPNNPM
CCCCHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEEEECCCCCHH
LQKAKDRLSLLGMQQGQIQQVLKTGKISYRIPVYSNATGYILDNTAAANASTAAPAASPQ
HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
SAPSDDGMGAMGSSSSAASNSSASTPTSSAIMLREGQYVGAGQSLFTIYTNKNLIAEFAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEECCCEEEEEEC
DPSVSSQIKKGQKLVFYEPSDKQTVYTGTIGLIQPVFKEGSNFTIARIYLQDNKFQTGKL
CCCHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCE
VTAAIPIVSKGWWLPQSAVLNLGNKSIVFKKEQDVFVPREVKTKNNGDGMVLIDQDISNW
EEEECCHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCC
NIASNAAYMIDSESFIKTASENKLKN
CCCCCEEEEEECHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKNSIAKLVGLLFVSILLLTACNKKTEPNNKPAHQHSTNQEYTCPMHPEVIQDKPGSCP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCCC
ICGMELVPRHTAGTETAIDSSLKHLLKPVNEQVVSNISVIKADQSTKIFSMHVQGIITYD
EECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEC
TRDQTSISSRVSGRIERLLINYNYQPVKKGQLIMEIYSPDLAAAQRELLFIYQSDPNNPM
CCCCHHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEEEECCCCCHH
LQKAKDRLSLLGMQQGQIQQVLKTGKISYRIPVYSNATGYILDNTAAANASTAAPAASPQ
HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCC
SAPSDDGMGAMGSSSSAASNSSASTPTSSAIMLREGQYVGAGQSLFTIYTNKNLIAEFAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCEEEEEEECCCEEEEEEC
DPSVSSQIKKGQKLVFYEPSDKQTVYTGTIGLIQPVFKEGSNFTIARIYLQDNKFQTGKL
CCCHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCE
VTAAIPIVSKGWWLPQSAVLNLGNKSIVFKKEQDVFVPREVKTKNNGDGMVLIDQDISNW
EEEECCHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCC
NIASNAAYMIDSESFIKTASENKLKN
CCCCCEEEEEECHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA