| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300815
Identifier: 146300815
GI number: 146300815
Start: 3637951
End: 3639198
Strand: Direct
Name: 146300815
Synonym: Fjoh_3070
Alternate gene names: NA
Gene position: 3637951-3639198 (Clockwise)
Preceding gene: 146300814
Following gene: 146300816
Centisome position: 59.67
GC content: 39.98
Gene sequence:
>1248_bases ATGTCAAACATTAAAATACTGGCAGTACTATTGCTTTTACTGCCATTACAGCTATTGAGCCAGACCCAACAGGTCTTGTC TCTTGATACAATCCTTCACAGGATTGATAAAAAAAACGTGCTCCTGCAAAGCTATAGCCTAAAGGCTGAAGGGTACAAAT ATAGTGCTGATGCCGCAACGGCATGGATGGCACCAATGGTGGGTGTTGGGACATTTATGACACCCTATCCTTTTCAGGAA GTTATGGATGACCGCGACAAAGGATCTTTAATGTTCAGAGTTGAACAAGATATCCCCAATATAGGAAAGCTAAACAAGAA GAAAAAATTTATCCAGTCCCAAGGAAATATTGAGAACGCTACGCGGACCGTTACCCTTAACGACTATAAAGCGCAGGCCA AACAGCTCTACTACAGCTGGATGGTAGCCGAAGAGCGAATGAAAGTTTTGGATCAGAACGAAAAGATAATGTTGACCATG AAAAAGATTGAGGAAGTACGCTATCCTTACAATCAGTCGCAATTGGGTAATGTATACAAGATTGACGCAAGGATTGAAGA GAACAAAAATATGATCCGCATGCAGGAAGGTGAAATCGCAAAAGCAAGAGCATGGCTCAACAGCTTGATGAACCAGCCTG GCAATGCTGATTTTTCAATCGACACAAGTATTACTCCTGTCTTCAACCCTGCTTTGCACGACACCACAAGTCTTGCTGCT GTGCGGGGAGATATTAAAAAGATGGATGCGGGAATTGAATCGATGCAGCTCAGTATTCAGGCGATGAAAGCGGAGAAAAA TCCCTCTTTTAAAATCCAGTTTGACCACATGAATTCTTTCGATAAAATGATGCCCAAAGCCTATTCGGTAATGGCAATGA TGTCTATTCCTATTGCTCCATGGTCATCAAAAATGTATAAATCAGATGTTAAAGCAATGCAATATAATGTACAGGCAATG GAGAAAGAGAAATCCGCCATGCTGCAGGAAACCCAGGGTATGTTATATGGTATGCAATATGAAATACTGACCATGCAAAA AAGAATCCAGGGACTCGAAACAAAAATAATCCCTTCAATGCAAAAATCGCTGGATGTAAACTTTCTGAACTATCAGGAAA ACAAACTGCAGATTCCTGTAGTAATTGACTCCTGGGAAGCTTTAAATATGCTGCAGAATAACTTATTAGATGAAAAATTA AAACTATATCAAATGATTGTCGATTATGAAAAAGAACTCTATCGCTAA
Upstream 100 bases:
>100_bases GTATTTACCTCTGCCGTACATATCTTATTAGTAACCCCGCTTATTTTCCTAATGTCTAAAGAATATGAATTACGAAAATA TGGCAAACTTGAAGTACATG
Downstream 100 bases:
>100_bases GTTAGTCGGATTGTTATTCGTTTCGATATTATTATTGACAGCCTGTAACAAGAAAACCGAGCCTAACAATAAGCCAGCAC ACCAGCATAGTACAAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Efflux Protein; Outer Membrane Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSNIKILAVLLLLLPLQLLSQTQQVLSLDTILHRIDKKNVLLQSYSLKAEGYKYSADAATAWMAPMVGVGTFMTPYPFQE VMDDRDKGSLMFRVEQDIPNIGKLNKKKKFIQSQGNIENATRTVTLNDYKAQAKQLYYSWMVAEERMKVLDQNEKIMLTM KKIEEVRYPYNQSQLGNVYKIDARIEENKNMIRMQEGEIAKARAWLNSLMNQPGNADFSIDTSITPVFNPALHDTTSLAA VRGDIKKMDAGIESMQLSIQAMKAEKNPSFKIQFDHMNSFDKMMPKAYSVMAMMSIPIAPWSSKMYKSDVKAMQYNVQAM EKEKSAMLQETQGMLYGMQYEILTMQKRIQGLETKIIPSMQKSLDVNFLNYQENKLQIPVVIDSWEALNMLQNNLLDEKL KLYQMIVDYEKELYR
Sequences:
>Translated_415_residues MSNIKILAVLLLLLPLQLLSQTQQVLSLDTILHRIDKKNVLLQSYSLKAEGYKYSADAATAWMAPMVGVGTFMTPYPFQE VMDDRDKGSLMFRVEQDIPNIGKLNKKKKFIQSQGNIENATRTVTLNDYKAQAKQLYYSWMVAEERMKVLDQNEKIMLTM KKIEEVRYPYNQSQLGNVYKIDARIEENKNMIRMQEGEIAKARAWLNSLMNQPGNADFSIDTSITPVFNPALHDTTSLAA VRGDIKKMDAGIESMQLSIQAMKAEKNPSFKIQFDHMNSFDKMMPKAYSVMAMMSIPIAPWSSKMYKSDVKAMQYNVQAM EKEKSAMLQETQGMLYGMQYEILTMQKRIQGLETKIIPSMQKSLDVNFLNYQENKLQIPVVIDSWEALNMLQNNLLDEKL KLYQMIVDYEKELYR >Mature_414_residues SNIKILAVLLLLLPLQLLSQTQQVLSLDTILHRIDKKNVLLQSYSLKAEGYKYSADAATAWMAPMVGVGTFMTPYPFQEV MDDRDKGSLMFRVEQDIPNIGKLNKKKKFIQSQGNIENATRTVTLNDYKAQAKQLYYSWMVAEERMKVLDQNEKIMLTMK KIEEVRYPYNQSQLGNVYKIDARIEENKNMIRMQEGEIAKARAWLNSLMNQPGNADFSIDTSITPVFNPALHDTTSLAAV RGDIKKMDAGIESMQLSIQAMKAEKNPSFKIQFDHMNSFDKMMPKAYSVMAMMSIPIAPWSSKMYKSDVKAMQYNVQAME KEKSAMLQETQGMLYGMQYEILTMQKRIQGLETKIIPSMQKSLDVNFLNYQENKLQIPVVIDSWEALNMLQNNLLDEKLK LYQMIVDYEKELYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47878; Mature: 47746
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIKILAVLLLLLPLQLLSQTQQVLSLDTILHRIDKKNVLLQSYSLKAEGYKYSADAAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCHHH AWMAPMVGVGTFMTPYPFQEVMDDRDKGSLMFRVEQDIPNIGKLNKKKKFIQSQGNIENA HHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCC TRTVTLNDYKAQAKQLYYSWMVAEERMKVLDQNEKIMLTMKKIEEVRYPYNQSQLGNVYK EEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCEEE IDARIEENKNMIRMQEGEIAKARAWLNSLMNQPGNADFSIDTSITPVFNPALHDTTSLAA EEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHH VRGDIKKMDAGIESMQLSIQAMKAEKNPSFKIQFDHMNSFDKMMPKAYSVMAMMSIPIAP HHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC WSSKMYKSDVKAMQYNVQAMEKEKSAMLQETQGMLYGMQYEILTMQKRIQGLETKIIPSM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCHHHHHHHHH QKSLDVNFLNYQENKLQIPVVIDSWEALNMLQNNLLDEKLKLYQMIVDYEKELYR HHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNIKILAVLLLLLPLQLLSQTQQVLSLDTILHRIDKKNVLLQSYSLKAEGYKYSADAAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCHHH AWMAPMVGVGTFMTPYPFQEVMDDRDKGSLMFRVEQDIPNIGKLNKKKKFIQSQGNIENA HHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCC TRTVTLNDYKAQAKQLYYSWMVAEERMKVLDQNEKIMLTMKKIEEVRYPYNQSQLGNVYK EEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCEEE IDARIEENKNMIRMQEGEIAKARAWLNSLMNQPGNADFSIDTSITPVFNPALHDTTSLAA EEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHH VRGDIKKMDAGIESMQLSIQAMKAEKNPSFKIQFDHMNSFDKMMPKAYSVMAMMSIPIAP HHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC WSSKMYKSDVKAMQYNVQAMEKEKSAMLQETQGMLYGMQYEILTMQKRIQGLETKIIPSM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCHHHHHHHHH QKSLDVNFLNYQENKLQIPVVIDSWEALNMLQNNLLDEKLKLYQMIVDYEKELYR HHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA