| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yhjA [C]
Identifier: 146300814
GI number: 146300814
Start: 3634258
End: 3634728
Strand: Direct
Name: yhjA [C]
Synonym: Fjoh_3068
Alternate gene names: 146300814
Gene position: 3634258-3634728 (Clockwise)
Preceding gene: 146300813
Following gene: 146300815
Centisome position: 59.61
GC content: 36.73
Gene sequence:
>471_bases ATGAAACGGTTCATCAGAAAGATTCTTTTTATTGGGTTAATTATTTTTCTACTGATGCAATTGTATCAGCCTGCCCGCAA TTCCGATTACGGGCAGGTTTTACCAATTCACATTTCAAAAGTCTATCCCATTCCCAAAAATATACAAACGATTCTTAAGA CTTCTTGTTACGATTGTCACAGCAGCAACACGCAATATCCATGGTACTCCTACATCCAGCCGGCACGTACCTTTATGGAA GGACATATCAAGGAAGGAAAAGAAAATTTGAATTTCAGCCAATGGGGAAGTTATTCGAAACGAAAACAGGAAAATAAATT AGACCGAATTGCCAAGCAGATAAAAGCCAATCAAATGCCTTTGGCTTCCTATACGCTGATCCATAAAGATGCAGTACTGA ATACTGTTCAGAAAGAACAGCTACTCAATTGGATTGAAAAAGTAAGTGATAGTCTTTCAAAAATAAATTAA
Upstream 100 bases:
>100_bases GGAAAAGGAGCTATCTGGATCAGTGAAACAAAAGAGATAAAAAACCCTTACTATGGTTCTAAAATGCTTACCTGCGGTTC AATGAAAAAACAATTGTAAA
Downstream 100 bases:
>100_bases ATCTATGGTACACAAATTAATAGAATGGTCCCTGCGCAACCGTTTCATCATATTACTATTATCAGCAGGAATATTTGTTT GGGGTATTATCTCTATTCAA
Product: hypothetical protein
Products: 2 Ferricytochrome C; 2 H2O. [C]
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKRFIRKILFIGLIIFLLMQLYQPARNSDYGQVLPIHISKVYPIPKNIQTILKTSCYDCHSSNTQYPWYSYIQPARTFME GHIKEGKENLNFSQWGSYSKRKQENKLDRIAKQIKANQMPLASYTLIHKDAVLNTVQKEQLLNWIEKVSDSLSKIN
Sequences:
>Translated_156_residues MKRFIRKILFIGLIIFLLMQLYQPARNSDYGQVLPIHISKVYPIPKNIQTILKTSCYDCHSSNTQYPWYSYIQPARTFME GHIKEGKENLNFSQWGSYSKRKQENKLDRIAKQIKANQMPLASYTLIHKDAVLNTVQKEQLLNWIEKVSDSLSKIN >Mature_156_residues MKRFIRKILFIGLIIFLLMQLYQPARNSDYGQVLPIHISKVYPIPKNIQTILKTSCYDCHSSNTQYPWYSYIQPARTFME GHIKEGKENLNFSQWGSYSKRKQENKLDRIAKQIKANQMPLASYTLIHKDAVLNTVQKEQLLNWIEKVSDSLSKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.11.1.5 [C]
Molecular weight: Translated: 18325; Mature: 18325
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFIRKILFIGLIIFLLMQLYQPARNSDYGQVLPIHISKVYPIPKNIQTILKTSCYDCH CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCC SSNTQYPWYSYIQPARTFMEGHIKEGKENLNFSQWGSYSKRKQENKLDRIAKQIKANQMP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LASYTLIHKDAVLNTVQKEQLLNWIEKVSDSLSKIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRFIRKILFIGLIIFLLMQLYQPARNSDYGQVLPIHISKVYPIPKNIQTILKTSCYDCH CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCC SSNTQYPWYSYIQPARTFMEGHIKEGKENLNFSQWGSYSKRKQENKLDRIAKQIKANQMP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LASYTLIHKDAVLNTVQKEQLLNWIEKVSDSLSKIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 Ferrocytochrome C; H2O2 [C]
Specific reaction: 2 Ferrocytochrome C + H2O2 = 2 Ferricytochrome C + 2 H2O. [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA