| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300810
Identifier: 146300810
GI number: 146300810
Start: 3630744
End: 3631595
Strand: Direct
Name: 146300810
Synonym: Fjoh_3064
Alternate gene names: NA
Gene position: 3630744-3631595 (Clockwise)
Preceding gene: 146300809
Following gene: 146300811
Centisome position: 59.55
GC content: 37.09
Gene sequence:
>852_bases ATGAAATCAATTCAAAAAGGATTGATGGCAATCACTCTATTGCTGTCAGTCATAGTGTTTGGCGCACCTATAAAAAATGC AAAAAACATAAATGCAAAAATTTATGGTAATTGTTTAATGTGCAAAACTGCTATTGAAAAAGCAGGAAACATCAAAAATA TCGCTTCGGTAAACTGGAATGAAAACACCAAAATAGCGGCTATTACCTATGATGAGAAGAAAACAAATCAGGATGAAGTC CTGAAAAGAATTGCCTTAGCAGGATATGACAGCGACCAGTTCTTAGCTCCTGGTGACGCCTATGCAAAACTTCCACAATG CTGCCAATATGAAAGAACAAATATGGCGGCTCCAATAAAAAAATCCGAAATGGATATGGGTAAAATGGATCATTCACAGC ATACAGCCGCAGTTCCTGCAGATGCACAAGAAAACAGTCCTTTTAAAGCAATTTTCGACAGCTACTTTGATGTAAAAGAT GCTTTGGTGAAAACAGATGCTAAAACTGCCGCATTGAAATCTAAAGAGCTCCTTACTGCAATCAATGCTATTAAAATGGA GAACCTAAAGCCAAAAGAACATACTGCATGGATGAATGCAATGAAAAGTTTAGCTTCAGATGCCACAAATATTTCTGAAA ACCAAGATGTAAAAAAGCAAAGGGAATCCTTTAAAAGCCTTTCCAAAAACACGTACGATCTTATAAAAACTGCTGATCAG CCGCAGCCGGTTTATTATAATCATTGTCCAATGGTTGATGCGAATTGGCTCAGCAAAGAAAGCGGCATCAAGAATCCGTA TTACGGTTCACAGATGTTAAGCTGTGGATCAACTATAGAAACAATCAAATAA
Upstream 100 bases:
>100_bases TTCATTTTTTTATTTTTCGCTTTTTGTAGAATAATTCTCTATACAGTTCTTGTATGCAATTATTTCTCAAAAGCAATATT CACTTCAAATACATTTTAAA
Downstream 100 bases:
>100_bases TCCCAAATCAAAAAATGAAAAATATAATAACCGTTAGTTCAATGCTTGGAGTTTTAATTTTAGGGACCGTTTCGCTGTTT TCTTGCAGTAAAATGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Cation Efflux System Transmembrane Protein; Nb-Dependent Receptor; Heavy Metal Transporter; Cation-Transporting ATPase; Co/Zn/Cd Efflux System Membrane Fusion Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK
Sequences:
>Translated_283_residues MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK >Mature_283_residues MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31382; Mature: 31382
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCC ENTKIAAITYDEKKTNQDEVLKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIK CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC KSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKDALVKTDAKTAALKSKELLTA HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH INAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK CCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCC >Mature Secondary Structure MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCC ENTKIAAITYDEKKTNQDEVLKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIK CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC KSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKDALVKTDAKTAALKSKELLTA HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH INAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK CCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA