| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is eptA [H]
Identifier: 146300795
GI number: 146300795
Start: 3610835
End: 3612355
Strand: Direct
Name: eptA [H]
Synonym: Fjoh_3047
Alternate gene names: 146300795
Gene position: 3610835-3612355 (Clockwise)
Preceding gene: 146300794
Following gene: 146300796
Centisome position: 59.22
GC content: 51.28
Gene sequence:
>1521_bases ATGTTAAAAGGTAGTCTTCCGGCAGCCCGTCTGGCGGCTTTAGCAAGCCTGGCCAACTGCATATTTTTCCATATCCCCTT CTTCGCTTTTGTGGTCGGGAACCTCAATTACGCGGGATTCAGCGGCATGATGACCATAGCCAGCCTCATCCTGCTGATGC TTGTGCTGGATTTCCTGGTCTTCTATCTGCTGGTCTACCTTGCCGGACTTATCGGCAGAATTATCATTTCGCTTTTTTTT GCCCTCAGCGCGGCGGCCCTGTATTTTATCAATGCCTACAGCGTGATCATAGACGAAAGCATGATCGGGAATATCCTCAA CACCAATTATGCGGAATCAAGCGCCTATTTTTCTATCACCCTGGCCCTCTATGTGCTCGTGCTCGGGATACTTCCCTCGG CGGCGCTCTTGAGGATCAGGACCGTAAAAGAGCCCCTTAAAAGGTTTGCAGCGCTCTGTTCGGGAAGCTTTCTCATTGCG CTTGCACTGGTTTTTATCAATTCTGCCGGCTGGCTTTGGATCGACAAGAATTCCAAAAAATTGGGAGGCCTGGCAATGCC TTGGTCCTATGCGGTCAACACCACTCTTTTCTACGTGCACCAGTATAAGAAAAACCAGAAGGAAATCCTTCTTCCCGATG CCCGCATCAGCAGCAGGAAGAAATCCATTGTGGTGCTGGTCATCGGGGAATCCGCAAGAAAGGCCAATTTCTCCCTGTAC GGCTATCCGAAGAACACCAATCCGATGCTTGCAGACATAGAAAATGTGCACCCTTTGGACGCGGTTTCCGCCGCAACCTA CACCACGGCCGGGGTAAAGGCGATCCTGGATTACAAAAAGACGGATGAGCTGTACGAAATACTGCCCAACTACCTCTTCC GGAACAATGTGGAGGTCATATGGAGGACCGCCAACTGGGGAGAGCCGCCGCTGCACATCAAAAATTACCAGGACAGGAAA TACCTTGGCGCAGCCTGCAGGGGAAAAGCCTGCGGCTATGACGAAATCCTGCTGGCGCTTTTCAAAGAGCAGATACTGGC CAGCAGAAAAGACAAGATACTCCTGGTGCTGCATACCAGCACCAGCCACGGCCCGAATTACAGCGCCAAGTATCCGGCAG GCTTCCGGAAGTTCAGTCCGGTCTGTAGCAGCGTCGAGCTTGCCGACTGCTCAAAGCAGGAACTGATGAACGCCTACGAC AATACGATAGTCTATACCGATTACCTGCTCAGCCGCGTGATCCAGAACCTGAAAGAGCTCAAGGAATTTGACAGCACCAT GATTTTTGTTTCCGACCACGGAGAGTCCCTCGGGGAAAACAATCTCTACATGCACGGCCTTCCGATGAGCATTGCCCCGA AGGAGCAGTTCGAGATACCCTTTATTGTCTGGGCATCGCCCGGCTCAAAAAAGCTGAAGGCCAATAAAACGGTGACCCAG TACCATGTCTTTCACAGCGTGCTGAACTTTCTGGATGTGGAAAGCCCCATCTACGACGAAAATATGAACATTTACCGATA G
Upstream 100 bases:
>100_bases TGGCTTGCGCTGGCCGGAAAGATCCTGCAGGAGAACCTATTGGTATTTTACATCTCAATTGCCGCATTATCCGTATCTTT ATTTAAAATAACCGCCGCAT
Downstream 100 bases:
>100_bases GATCAACAACCGGCCTCGGCCATAAAAATAATTTCATATGAATGGAACAGTATTTATCAACCGGCTCAGCAACAGGTCAA GGCTGGCAATTTCCGCTTCG
Product: lipid A phosphoethanolamine transferase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MLKGSLPAARLAALASLANCIFFHIPFFAFVVGNLNYAGFSGMMTIASLILLMLVLDFLVFYLLVYLAGLIGRIIISLFF ALSAAALYFINAYSVIIDESMIGNILNTNYAESSAYFSITLALYVLVLGILPSAALLRIRTVKEPLKRFAALCSGSFLIA LALVFINSAGWLWIDKNSKKLGGLAMPWSYAVNTTLFYVHQYKKNQKEILLPDARISSRKKSIVVLVIGESARKANFSLY GYPKNTNPMLADIENVHPLDAVSAATYTTAGVKAILDYKKTDELYEILPNYLFRNNVEVIWRTANWGEPPLHIKNYQDRK YLGAACRGKACGYDEILLALFKEQILASRKDKILLVLHTSTSHGPNYSAKYPAGFRKFSPVCSSVELADCSKQELMNAYD NTIVYTDYLLSRVIQNLKELKEFDSTMIFVSDHGESLGENNLYMHGLPMSIAPKEQFEIPFIVWASPGSKKLKANKTVTQ YHVFHSVLNFLDVESPIYDENMNIYR
Sequences:
>Translated_506_residues MLKGSLPAARLAALASLANCIFFHIPFFAFVVGNLNYAGFSGMMTIASLILLMLVLDFLVFYLLVYLAGLIGRIIISLFF ALSAAALYFINAYSVIIDESMIGNILNTNYAESSAYFSITLALYVLVLGILPSAALLRIRTVKEPLKRFAALCSGSFLIA LALVFINSAGWLWIDKNSKKLGGLAMPWSYAVNTTLFYVHQYKKNQKEILLPDARISSRKKSIVVLVIGESARKANFSLY GYPKNTNPMLADIENVHPLDAVSAATYTTAGVKAILDYKKTDELYEILPNYLFRNNVEVIWRTANWGEPPLHIKNYQDRK YLGAACRGKACGYDEILLALFKEQILASRKDKILLVLHTSTSHGPNYSAKYPAGFRKFSPVCSSVELADCSKQELMNAYD NTIVYTDYLLSRVIQNLKELKEFDSTMIFVSDHGESLGENNLYMHGLPMSIAPKEQFEIPFIVWASPGSKKLKANKTVTQ YHVFHSVLNFLDVESPIYDENMNIYR >Mature_506_residues MLKGSLPAARLAALASLANCIFFHIPFFAFVVGNLNYAGFSGMMTIASLILLMLVLDFLVFYLLVYLAGLIGRIIISLFF ALSAAALYFINAYSVIIDESMIGNILNTNYAESSAYFSITLALYVLVLGILPSAALLRIRTVKEPLKRFAALCSGSFLIA LALVFINSAGWLWIDKNSKKLGGLAMPWSYAVNTTLFYVHQYKKNQKEILLPDARISSRKKSIVVLVIGESARKANFSLY GYPKNTNPMLADIENVHPLDAVSAATYTTAGVKAILDYKKTDELYEILPNYLFRNNVEVIWRTANWGEPPLHIKNYQDRK YLGAACRGKACGYDEILLALFKEQILASRKDKILLVLHTSTSHGPNYSAKYPAGFRKFSPVCSSVELADCSKQELMNAYD NTIVYTDYLLSRVIQNLKELKEFDSTMIFVSDHGESLGENNLYMHGLPMSIAPKEQFEIPFIVWASPGSKKLKANKTVTQ YHVFHSVLNFLDVESPIYDENMNIYR
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=525, Percent_Identity=31.047619047619, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI87082286, Length=479, Percent_Identity=24.6346555323591, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI1790392, Length=487, Percent_Identity=25.2566735112936, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082223, Length=313, Percent_Identity=26.517571884984, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 56691; Mature: 56691
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGSLPAARLAALASLANCIFFHIPFFAFVVGNLNYAGFSGMMTIASLILLMLVLDFLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FYLLVYLAGLIGRIIISLFFALSAAALYFINAYSVIIDESMIGNILNTNYAESSAYFSIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LALYVLVLGILPSAALLRIRTVKEPLKRFAALCSGSFLIALALVFINSAGWLWIDKNSKK HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCC LGGLAMPWSYAVNTTLFYVHQYKKNQKEILLPDARISSRKKSIVVLVIGESARKANFSLY CCCCCCCHHHHHHHEEEEEEHHCCCCCEEECCCCHHCCCCCEEEEEEECCCCCCCCEEEE GYPKNTNPMLADIENVHPLDAVSAATYTTAGVKAILDYKKTDELYEILPNYLFRNNVEVI ECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE WRTANWGEPPLHIKNYQDRKYLGAACRGKACGYDEILLALFKEQILASRKDKILLVLHTS EEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC TSHGPNYSAKYPAGFRKFSPVCSSVELADCSKQELMNAYDNTIVYTDYLLSRVIQNLKEL CCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHH KEFDSTMIFVSDHGESLGENNLYMHGLPMSIAPKEQFEIPFIVWASPGSKKLKANKTVTQ HHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCEECCCHHHH YHVFHSVLNFLDVESPIYDENMNIYR HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLKGSLPAARLAALASLANCIFFHIPFFAFVVGNLNYAGFSGMMTIASLILLMLVLDFLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FYLLVYLAGLIGRIIISLFFALSAAALYFINAYSVIIDESMIGNILNTNYAESSAYFSIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LALYVLVLGILPSAALLRIRTVKEPLKRFAALCSGSFLIALALVFINSAGWLWIDKNSKK HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCC LGGLAMPWSYAVNTTLFYVHQYKKNQKEILLPDARISSRKKSIVVLVIGESARKANFSLY CCCCCCCHHHHHHHEEEEEEHHCCCCCEEECCCCHHCCCCCEEEEEEECCCCCCCCEEEE GYPKNTNPMLADIENVHPLDAVSAATYTTAGVKAILDYKKTDELYEILPNYLFRNNVEVI ECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE WRTANWGEPPLHIKNYQDRKYLGAACRGKACGYDEILLALFKEQILASRKDKILLVLHTS EEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC TSHGPNYSAKYPAGFRKFSPVCSSVELADCSKQELMNAYDNTIVYTDYLLSRVIQNLKEL CCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHH KEFDSTMIFVSDHGESLGENNLYMHGLPMSIAPKEQFEIPFIVWASPGSKKLKANKTVTQ HHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCEECCCHHHH YHVFHSVLNFLDVESPIYDENMNIYR HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8282725 [H]