| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300766
Identifier: 146300766
GI number: 146300766
Start: 3568882
End: 3569280
Strand: Direct
Name: 146300766
Synonym: Fjoh_3017
Alternate gene names: NA
Gene position: 3568882-3569280 (Clockwise)
Preceding gene: 146300759
Following gene: 146300767
Centisome position: 58.54
GC content: 42.36
Gene sequence:
>399_bases ATGGGGCGGACACCGAAAGAGGAACCGAGTATACATCGGCATGTTTTTCGGCTGACAGACAGGGAGAACGCAAAACTTCT TTCACTTTTTGAAGCCTCTGGAATTGACAATAAGGCAAAATTTATTGTTGCTCGACTCTTCGAAAAGGAGCTCAGGACGA TAAGGATCGACAAGGGAACCATTGACTTTTACATGCGTCTGACCACTTTTTACGGACAGTTCCGTTCCATCGGAGTGAAC TACAACCAGCTTGTAAAACTGCTGTACAGACATTTTTCGGAGAAAAAAGCAGCCGCCTATCTCTATAAATTGGAAAAACA GACTGCTGAAATGGCATCCTTGTGCCAAAAAATCATCCAGCTGACACAAGACTTTGAAGAAAAATTCCAAAAAAAATGA
Upstream 100 bases:
>100_bases GCCCTGCCGGGGGGCCGGAAAACCCTTCCGAAGTCAGGGTTTTAAATTATGCTAAAAATGAAATATTATGCATGGGGAAA AATATGAAGGACGCAAAAAA
Downstream 100 bases:
>100_bases TAGCAAAAATCGGCAGGAGCAGCAACTTATATGGCGCACTGGCATACAATCAGCAGAAGGTTGATAAGCAGAAAGGCAGG ATTCTATTTTCAAACAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGRTPKEEPSIHRHVFRLTDRENAKLLSLFEASGIDNKAKFIVARLFEKELRTIRIDKGTIDFYMRLTTFYGQFRSIGVN YNQLVKLLYRHFSEKKAAAYLYKLEKQTAEMASLCQKIIQLTQDFEEKFQKK
Sequences:
>Translated_132_residues MGRTPKEEPSIHRHVFRLTDRENAKLLSLFEASGIDNKAKFIVARLFEKELRTIRIDKGTIDFYMRLTTFYGQFRSIGVN YNQLVKLLYRHFSEKKAAAYLYKLEKQTAEMASLCQKIIQLTQDFEEKFQKK >Mature_131_residues GRTPKEEPSIHRHVFRLTDRENAKLLSLFEASGIDNKAKFIVARLFEKELRTIRIDKGTIDFYMRLTTFYGQFRSIGVNY NQLVKLLYRHFSEKKAAAYLYKLEKQTAEMASLCQKIIQLTQDFEEKFQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15660; Mature: 15529
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTPKEEPSIHRHVFRLTDRENAKLLSLFEASGIDNKAKFIVARLFEKELRTIRIDKGT CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCH IDFYMRLTTFYGQFRSIGVNYNQLVKLLYRHFSEKKAAAYLYKLEKQTAEMASLCQKIIQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQDFEEKFQKK HHHHHHHHHCCC >Mature Secondary Structure GRTPKEEPSIHRHVFRLTDRENAKLLSLFEASGIDNKAKFIVARLFEKELRTIRIDKGT CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCH IDFYMRLTTFYGQFRSIGVNYNQLVKLLYRHFSEKKAAAYLYKLEKQTAEMASLCQKIIQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTQDFEEKFQKK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA